........ _A_ X00000000X0000X00XX00000000XX000000090000X000000XXX1X00000090000000XXX100X0 __1__ ........ _T_ 0X0000X00000X0000000000X0X0000X00000009X000009000000009000000008X0000000900 __1__ ........ _G_ 00XX0X00X0XX0X00X00XX0X0X00000000XXX1X10X00X00X000000X1X0XX10XX20X00000X100 __1__ ........ _C_ 0000X00X0000000X00000X0000X00X0XX000000000X0X00X00090000X000X0000090009000X __1__ ........ _N_ 000000000000000000000000000000000000000000000000000000000000000000000000000 __1__ ........ ALL wwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwvvvuuttsssrrrqqqpppoonl __1__ ******** *** ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^**************************************** __1__ ######## CNS ATGGCGTCGAGGTGACGAAGGCGTGTCAACTCCGGGaGtTGACGCtGCAAAcAGtGCGGaCGGtTGcAAAcGtAC __1__ ######## QLT XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX+X+XXXXXX+XXXXX+XX+XXXX+XXX+XX+XXX+X+XX __1__ >CONSENSUS__1__ Length: 75 [gain: 40] ATGGCGTCGAGGTGACGAAGGCGTGTCAACTCCGGGAGTTGACGCTGCAAACAGTGCGGACGGTTGCAAACGTAC OLD KEY: ATGGCGTCGAGGTGACGAAGGCGTGTCAACTCCGG NEW KEY: GACGCTGCAAACAGTGCGGACGGTTGCAAACGTAC ........ _A_ 0X000000XXX0X000000X0000000XXX000X0000X000X000XX00000X000000000009000000000 __2__ ........ _T_ 00000X00000000X00000000XX0000000X0000000X0000000XXX000X00X0X00X000000000090 __2__ ........ _G_ X00X00X000000X0X0XX00XX00X00000X0000X0000X00X000000X000X00X00X0X00X009XX009 __2__ ........ _C_ 00X0X00X000X0000X000X00000X000X000XX0X0X000X0X000000X000X000X000X00X9100910 __2__ ........ _N_ 000000000000000000000000000000000000000000000000000000000000000000000000000 __2__ ........ ALL wwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwvvuuutsssrrqqpppoonlkg __2__ ******** *** ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^**************************************** __2__ ######## CNS GACGCTGCAAACAGTGCGGACGGTTGCAAACGTACCGCACTGACGCAATTTGCATGCTGTCGTGCaGCcgGGctg __2__ ######## QLT XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX+XX++XX+++ __2__ >CONSENSUS__2__ Length: 115 [gain: 40] ATGGCGTCGAGGTGACGAAGGCGTGTCAACTCCGGGAGTTGACGCTGCAAACAGTGCGGACGGTTGCAAACGTACCGCACTGACGCAATTTGCATGCTGTCGTGCAGCCGGGCTG OLD KEY: GACGCTGCAAACAGTGCGGACGGTTGCAAACGTAC NEW KEY: TGACGCAATTTGCATGCTGTCGTGCAGCCGGGCTG ........ _A_ 00X000XX00000X00000000000X0000000000X00X00XX0010090000900990000000101909000 __3__ ........ _T_ X0000000XXX000X00X0X00X0000000000X000000000000000090100900000000009X0090800 __3__ ........ _G_ 0X00X000000X000X00X00X0X00X00XXX00X000X00X009090001X0910000X019X90009001019 __3__ ........ _C_ 000X0X000000X000X000X000X00XX000X00X0X0090000X09910090009110991009000010291 __3__ ........ _N_ 000000000000000000000000000000000000000000000000000000000000000000000000000 __3__ ........ ALL wwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwvvvvuuttttsssrrrqqqpppoonljg __3__ ******** *** ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^**************************************** __3__ ######## CNS TGACGCAATTTGCATGCTGTCGTGCAGCCGGGCTGCACGAcGAAgCgccatGcgatcaaGccgGgctTgatatcg __3__ ######## QLT XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX+XXX+X+++++X+++++++X+++X+++X+++++++ __3__ >CONSENSUS__3__ Length: 155 [gain: 40] ATGGCGTCGAGGTGACGAAGGCGTGTCAACTCCGGGAGTTGACGCTGCAAACAGTGCGGACGGTTGCAAACGTACCGCACTGACGCAATTTGCATGCTGTCGTGCAGCCGGGCTGCACGACGAAGCGCCATGCGATCAAGCCGGGCTTGATATCG OLD KEY: TGACGCAATTTGCATGCTGTCGTGCAGCCGGGCTG NEW KEY: CGAAGCGCCATGCGATCAAGCCGGGCTTGATATCG ........ _A_ 00XX00000X0000X00XX0000000000X0X00000000000090X0X00000000000009X12280907017 __4__ ........ _T_ 0000000000X0000X0000000000XX00X0X000000000000000000090900000000000001010881 __4__ ........ _G_ 0X00X0X0000X0X00000X00XXX000X00000X0X0X000X00X000XXX000900XX0X0088800101000 __4__ ........ _C_ X0000X0XX000X000X000XX000X0000000X0X0X0XXX0X000X00000X10XX00900010019091202 __4__ ........ _N_ 000000000000000000000000000000000000000000000000000000000000000000000000000 __4__ ........ ALL wwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwvvvuuutttssrrrrqqqqppooonmljg __4__ ******** *** ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^**************************************** __4__ ######## CNS CGAAGCGCCATGCGATCAAGCCGGGCTTGATATCGCGCGCCCGCaGACAGGGtCtgCCGGcGaAgggacacatta __4__ ######## QLT XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX+XXXXXXX+X++XXXX+X+X+++++++@++@ __4__ >CONSENSUS__4__ Length: 195 [gain: 40] ATGGCGTCGAGGTGACGAAGGCGTGTCAACTCCGGGAGTTGACGCTGCAAACAGTGCGGACGGTTGCAAACGTACCGCACTGACGCAATTTGCATGCTGTCGTGCAGCCGGGCTGCACGACGAAGCGCCATGCGATCAAGCCGGGCTTGATATCGCGCGCCCGCAGACAGGGTCTGCCGGCGAAGGGACACATTA OLD KEY: CGAAGCGCCATGCGATCAAGCCGGGCTTGATATCG NEW KEY: CCGCAGACAGGGTCTGCCGGCGAAGGGACACATTA ........ _A_ 0000X0X0X0000000000000XX000X0X0X00X000000X000000000090099009X9X1000000X9001 __5__ ........ _T_ 000000000000X0X00000000000000000XX00009000000000090000000000000900009000000 __5__ ........ _G_ 00X00X000XXX000X00XX0X00XXX0000000000X0X00X00XXX00X000X00XX00000X0XX1000901 __5__ ........ _C_ XX0X000X00000X00XX00X0000000X0X0000XX010X00XX000X00X0X00000001000X000X00099 __5__ ........ _N_ 000000000000000000000000000000000000000000000000000000000000000000000000000 __5__ ........ ALL tttttttttttttttttttttttttttttttttttttsssssrrrrrrqqqqqppppppooooonllkkjigfdc __5__ ******** *** ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^**************************************** __5__ ######## CNS CCGCAGACAGGGTCTGCCGGCGAAGGGACACATTACCGtGCAGCCGGGCtGCaCGaaGGaAaAtGCGGtCAagcc __5__ ######## QLT XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX+XXXXXXXXXX+XX+XX++XX+X+X+XXXX+XX++++ __5__ >CONSENSUS__5__ Length: 235 [gain: 40] ATGGCGTCGAGGTGACGAAGGCGTGTCAACTCCGGGAGTTGACGCTGCAAACAGTGCGGACGGTTGCAAACGTACCGCACTGACGCAATTTGCATGCTGTCGTGCAGCCGGGCTGCACGACGAAGCGCCATGCGATCAAGCCGGGCTTGATATCGCGCGCCCGCAGACAGGGTCTGCCGGCGAAGGGACACATTACCGTGCAGCCGGGCTGCACGAAGGAAAATGCGGTCAAGCC OLD KEY: CCGCAGACAGGGTCTGCCGGCGAAGGGACACATTA NEW KEY: CAGCCGGGCTGCACGAAGGAAAATGCGGTCAAGCC ........ _A_ 0X0000000000X00XX00XXXX0000000XX0000000000X0X000000000000009090000000000000 __6__ ........ _T_ 000000000X0000000000000X0000X0000000000XX00X0000000000000000000008000000000 __6__ ........ _G_ 00X00XXX00X000X00XX00000X0XX0000X00XXX000X00000X0X0X000909X100XXX100900991X __6__ ........ _C_ X00XX000X00X0X00000000000X000X000XX000X000000XX0X0X0XXX1X000X00001XX0990190 __6__ ........ _N_ 000000000000000000000000000000000000000000000000000000000000000000000000000 __6__ ........ ALL uuuuuuuuuuuuuuuuuuuuuuuuuuuuuuuuuuuuutttttsssrrrqqqqqqqqpppppooooonmkihgedc __6__ ******** *** ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^**************************************** __6__ ######## CNS CAGCCGGGCTGCACGAAGGAAAATGCGGTCAAGCCGGGCTTGATACCGCGCGCCCgCgGaCaGGGtCCgccggcG __6__ ######## QLT XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX+X+X+X+XXX+XX++++++X __6__ >CONSENSUS__6__ Length: 275 [gain: 40] ATGGCGTCGAGGTGACGAAGGCGTGTCAACTCCGGGAGTTGACGCTGCAAACAGTGCGGACGGTTGCAAACGTACCGCACTGACGCAATTTGCATGCTGTCGTGCAGCCGGGCTGCACGACGAAGCGCCATGCGATCAAGCCGGGCTTGATATCGCGCGCCCGCAGACAGGGTCTGCCGGCGAAGGGACACATTACCGTGCAGCCGGGCTGCACGAAGGAAAATGCGGTCAAGCCGGGCTTGATACCGCGCGCCCGCGGACAGGGTCCGCCGGCG OLD KEY: CAGCCGGGCTGCACGAAGGAAAATGCGGTCAAGCC NEW KEY: TGATACCGCGCGCCCGCGGACAGGGTCCGCCGGCG ........ _A_ 00X0X00000000000000X0X0000000000000XX05X010000X0000000000000904909X0XX09X00 __7__ ........ _T_ X00X000000000000000000000X0000000000000009090000000000000900000000000000008 __7__ ........ _G_ 0X00000X0X0X000X0XX000XXX000X00XX0X0005000X00000XX00XXX000XX1000X00X0001000 __7__ ........ _C_ 00000XX0X0X0XXX0X000X00000XX0XX00X000X00X100XX0900XX000XX1000X6000000091091 __7__ ........ _N_ 000000000000000000000000000000000000000000000000000000000000000000000000000 __7__ ........ ALL wwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwvvvvuuutttsssrrrrqqqqqppooooomlkh __7__ ******** *** ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^**************************************** __7__ ######## CNS TGATACCGCGCGCCCGCGGACAGGGTCCGCCGGCGAACgACtGtCCAcGGCCGGGCCtGGaCcaGaAGAAcaAct __7__ ######## QLT XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX?XX+X+XXX+XXXXXXXXX+XX+X!+X+XXXX++X++ __7__ >CONSENSUS__7__ Length: 315 [gain: 40] ATGGCGTCGAGGTGACGAAGGCGTGTCAACTCCGGGAGTTGACGCTGCAAACAGTGCGGACGGTTGCAAACGTACCGCACTGACGCAATTTGCATGCTGTCGTGCAGCCGGGCTGCACGACGAAGCGCCATGCGATCAAGCCGGGCTTGATATCGCGCGCCCGCAGACAGGGTCTGCCGGCGAAGGGACACATTACCGTGCAGCCGGGCTGCACGAAGGAAAATGCGGTCAAGCCGGGCTTGATACCGCGCGCCCGCGGACAGGGTCCGCCGGCGAACGACTGTCCACGGCCGGGCCTGGACCAGAAGAACAACT OLD KEY: TGATACCGCGCGCCCGCGGACAGGGTCCGCCGGCG NEW KEY: CTGTCCACGGCCGGGCCTGGACCAGAAGAACAACT ........ _A_ 000000X0000000000000X00X0XX0XX0XX00000000X00000000000090990XX0XX09000000X60 __8__ ........ _T_ 0X0X0000000000000X0000000000000000X0X00000000000090000000000000000000000040 __8__ ........ _G_ 00X00000XX00XXX000XX0000X00X0000000X0X0XX0X007XX000090000000090090099090009 __8__ ........ _C_ X000XX0X00XX000XX0000XX0000000X00X0000X0000XX200X0XX0X0X00X001000090090X000 __8__ ........ _N_ 000000000000000000000000000000000000000000000000000000000000000000000000000 __8__ ........ ALL sssssssssssssssssssssssssssssssssssssssrrrrrrrrrqqqqqpppppppooooooonmljhgeb __8__ ******** *** ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^**************************************** __8__ ######## CNS CTGTCCACGGCCGGGCCTGGACCAGAAGAACAACTGTGCGGAGCCgGGCtCCgCaCaaCAAgAAgacggcgCAag __8__ ######## QLT XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX@XXX+XX+X+X++XXX+XX+++++++XX!+ __8__ >CONSENSUS__8__ Length: 355 [gain: 40] ATGGCGTCGAGGTGACGAAGGCGTGTCAACTCCGGGAGTTGACGCTGCAAACAGTGCGGACGGTTGCAAACGTACCGCACTGACGCAATTTGCATGCTGTCGTGCAGCCGGGCTGCACGACGAAGCGCCATGCGATCAAGCCGGGCTTGATATCGCGCGCCCGCAGACAGGGTCTGCCGGCGAAGGGACACATTACCGTGCAGCCGGGCTGCACGAAGGAAAATGCGGTCAAGCCGGGCTTGATACCGCGCGCCCGCGGACAGGGTCCGCCGGCGAACGACTGTCCACGGCCGGGCCTGGACCAGAAGAACAACTGTGCGGAGCCGGGCTCCGCACAACAAGAAGACGGCGCAAG OLD KEY: CTGTCCACGGCCGGGCCTGGACCAGAAGAACAACT NEW KEY: GAGCCGGGCTCCGCACAACAAGAAGACGGCGCAAG ........ _A_ 0X000000000000X0XX0XX0XX0X000000XX0001X8XX00000000XX00000000000009000909000 __9__ ........ _T_ 000000000X00000000000000000000000000000000000X00000009090009000000000000000 __9__ ........ _G_ X0X00XXX0000X00000000X00X00XX0X000X0X902000X00X0X000X0000XX000XXX000X0X00X0 __9__ ........ _C_ 000XX000X0XX0X0X00X0000000X00X0X000X000000X0X00X0X0000X0X000XX0000XX0000X0X __9__ ........ _N_ 000000000000000000000000000000000000000000000000000000000000000000000000000 __9__ ........ ALL wwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwvvvvvuuuuutttsssrrrqqppppooonlljh __9__ ******** *** ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^**************************************** __9__ ######## CNS GAGCCGGGCTCCGCACAACAAGAAGACGGCGCAAGCGgAaAACGCTGCGCAAGtCtCGGtCCGGGaCCGaGaCGC __9__ ######## QLT XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX+X+XXXXXXXXXXXXX+X+XXX+XXXXX+XXX+X+XXX __9__ >CONSENSUS__9__ Length: 395 [gain: 40] ATGGCGTCGAGGTGACGAAGGCGTGTCAACTCCGGGAGTTGACGCTGCAAACAGTGCGGACGGTTGCAAACGTACCGCACTGACGCAATTTGCATGCTGTCGTGCAGCCGGGCTGCACGACGAAGCGCCATGCGATCAAGCCGGGCTTGATATCGCGCGCCCGCAGACAGGGTCTGCCGGCGAAGGGACACATTACCGTGCAGCCGGGCTGCACGAAGGAAAATGCGGTCAAGCCGGGCTTGATACCGCGCGCCCGCGGACAGGGTCCGCCGGCGAACGACTGTCCACGGCCGGGCCTGGACCAGAAGAACAACTGTGCGGAGCCGGGCTCCGCACAACAAGAAGACGGCGCAAGCGGAAAACGCTGCGCAAGTCTCGGTCCGGGACCGAGACGC OLD KEY: GAGCCGGGCTCCGCACAACAAGAAGACGGCGCAAG NEW KEY: AACGCTGCGCAAGTCTCGGTCCGGGACCGAGACGC ........ _A_ XX00000000XX0000000000000X000X0X0008909X0X3080000000010090X0104000000080000 __10__ ........ _T_ 00000X0000000X0X000X0000000000000001100000001090X00900000000900000007000000 __10__ ........ _G_ 000X00X0X000X0000XX000XXX000X0X00X000010X0700X000X00X9X00X000X1XX09X2X10910 __10__ ........ _C_ 00X0X00X0X0000X0X000XX0000XX0000X0X10X00000X100X00X1000X000X006009001009199 __10__ ........ _N_ 000000000000000000000000000000000000000000000000000000000000000000000000000 __10__ ........ ALL wwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwvvutttssrrrrqpppoolj __10__ ******** *** ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^**************************************** __10__ ######## CNS AACGCTGCGCAAGTCTCGGTCCGGGACCGAGACGCaaCaAGAgCaGtCTGCtGgGCaGACtGcGGcgGtGacgcc __10__ ######## QLT XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX++X+XXX@X+X+XXXX+X+XX+XXX+X!XX++X@X+++++ __10__ >CONSENSUS__10__ Length: 435 [gain: 40] ATGGCGTCGAGGTGACGAAGGCGTGTCAACTCCGGGAGTTGACGCTGCAAACAGTGCGGACGGTTGCAAACGTACCGCACTGACGCAATTTGCATGCTGTCGTGCAGCCGGGCTGCACGACGAAGCGCCATGCGATCAAGCCGGGCTTGATATCGCGCGCCCGCAGACAGGGTCTGCCGGCGAAGGGACACATTACCGTGCAGCCGGGCTGCACGAAGGAAAATGCGGTCAAGCCGGGCTTGATACCGCGCGCCCGCGGACAGGGTCCGCCGGCGAACGACTGTCCACGGCCGGGCCTGGACCAGAAGAACAACTGTGCGGAGCCGGGCTCCGCACAACAAGAAGACGGCGCAAGCGGAAAACGCTGCGCAAGTCTCGGTCCGGGACCGAGACGCAACAAGAGCAGTCTGCTGGGCAGACTGCGGCGGTGACGCC OLD KEY: AACGCTGCGCAAGTCTCGGTCCGGGACCGAGACGC NEW KEY: GAGCAGTCTGCTGGGCAGACTGCGGCGGTGACGCC ........ _A_ 0X00X00000000000X0X00000000000X000009X00009X0X0000XX00000000X00000X00090X00 __11__ ........ _T_ 000000X0X00X00000000X0000000X000000000X0X00000000X0000090XX0000000000009009 __11__ ........ _G_ X0X00X000X00XXX00X000X0XX0XX0X00X00X100X0010X00X0000X0X0000X00X0X0000X00000 __11__ ........ _C_ 000X000X00X0000X000X00X00X00000X0XX000000X0000X0X0000X00X0000X0X0X0XX0000X1 __11__ ........ _N_ 000000000000000000000000000000000000000000000000000000000000000000000000000 __11__ ........ ALL vvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvuuuuuuuttttssssrrrrqqqqqppppoooooonmkjhd __11__ ******** *** ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^**************************************** __11__ ######## CNS GAGCAGTCTGCTGGGCAGACTGCGGCGGTGACGCCGaATGTCaAGACGCTAAGCGtCTTGACGCGCACCGatACt __11__ ######## QLT XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX+XXXXX+XXXXXXXXXXXX+XXXXXXXXXXXXXX++XX+ __11__ >CONSENSUS__11__ Length: 475 [gain: 40] ATGGCGTCGAGGTGACGAAGGCGTGTCAACTCCGGGAGTTGACGCTGCAAACAGTGCGGACGGTTGCAAACGTACCGCACTGACGCAATTTGCATGCTGTCGTGCAGCCGGGCTGCACGACGAAGCGCCATGCGATCAAGCCGGGCTTGATATCGCGCGCCCGCAGACAGGGTCTGCCGGCGAAGGGACACATTACCGTGCAGCCGGGCTGCACGAAGGAAAATGCGGTCAAGCCGGGCTTGATACCGCGCGCCCGCGGACAGGGTCCGCCGGCGAACGACTGTCCACGGCCGGGCCTGGACCAGAAGAACAACTGTGCGGAGCCGGGCTCCGCACAACAAGAAGACGGCGCAAGCGGAAAACGCTGCGCAAGTCTCGGTCCGGGACCGAGACGCAACAAGAGCAGTCTGCTGGGCAGACTGCGGCGGTGACGCCGAATGTCAAGACGCTAAGCGTCTTGACGCGCACCGATACT OLD KEY: GAGCAGTCTGCTGGGCAGACTGCGGCGGTGACGCC NEW KEY: TCAAGACGCTAAGCGTCTTGACGCGCACCGATACT ........ _A_ 00XX0X0000XX00000000X00000X000X0X0000X0000X00X00000X1X000XX000000X10000000X __12__ ........ _T_ X00000000X00000X0XX000000000000X00X000XX0000X0X0090000900000X000X00X00X0000 __12__ ........ _G_ 0000X00X0000X0X0000X00X0X0000X00000XX000000X0000X0X0200XX00000X0009000000X0 __12__ ........ _C_ 0X0000X0X0000X00X0000X0X0X0XX0000X000000XX00000X01007010000X0X0X0000XX0XX00 __12__ ........ _N_ 000000000000000000000000000000000000000000000000000000000000000000000000000 __12__ ........ ALL wwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwvvvvuuuttttssssrrrqqqqppomkg __12__ ******** *** ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^**************************************** __12__ ######## CNS TCAAGACGCTAAGCGTCTTGACGCGCACCGATACTGGATTCCAGTATCGtGAcAtGGAACTCGCTAgTCCTCCGA __12__ ######## QLT XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX+XX@X+XXXXXXXXXXX+XXXXXXXX __12__ >CONSENSUS__12__ Length: 515 [gain: 40] ATGGCGTCGAGGTGACGAAGGCGTGTCAACTCCGGGAGTTGACGCTGCAAACAGTGCGGACGGTTGCAAACGTACCGCACTGACGCAATTTGCATGCTGTCGTGCAGCCGGGCTGCACGACGAAGCGCCATGCGATCAAGCCGGGCTTGATATCGCGCGCCCGCAGACAGGGTCTGCCGGCGAAGGGACACATTACCGTGCAGCCGGGCTGCACGAAGGAAAATGCGGTCAAGCCGGGCTTGATACCGCGCGCCCGCGGACAGGGTCCGCCGGCGAACGACTGTCCACGGCCGGGCCTGGACCAGAAGAACAACTGTGCGGAGCCGGGCTCCGCACAACAAGAAGACGGCGCAAGCGGAAAACGCTGCGCAAGTCTCGGTCCGGGACCGAGACGCAACAAGAGCAGTCTGCTGGGCAGACTGCGGCGGTGACGCCGAATGTCAAGACGCTAAGCGTCTTGACGCGCACCGATACTGGATTCCAGTATCGTGACATGGAACTCGCTAGTCCTCCGA OLD KEY: TCAAGACGCTAAGCGTCTTGACGCGCACCGATACT NEW KEY: CCAGTATCGTGACATGGAACTCGCTAGTCCTCCGA ........ _A_ 00X00X00000X0X000XX000000X00000000X00X000000000X0000X0000000000X000X00X0000 __13__ ........ _T_ 0000X0X00X0000X00000X000X00X00X000000000000X00000XX000XX000XX0000000X0000X0 __13__ ........ _G_ 000X0000X0X0000XX00000X000X000000X00X00XX0X00XX0X00X00000X000000X000090X00X __13__ ........ _C_ XX00000X0000X000000X0X0X0000XX0XX00X00X00X00X00000000X00X0X00XX009X00000900 __13__ ........ _N_ 000000000000000000000000000000000000000000000000000000000000000000000000000 __13__ ........ ALL wwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwvvvvvvuuttttssssrrrqqqqqppppoooomkifd __13__ ******** *** ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^**************************************** __13__ ######## CNS CCAGTATCGTGACATGGAACTCGCTAGTCCTCCGACGACGGCGTCGGAGTTGACTTCGCTTCCAGcCATgAGcTG __13__ ######## QLT XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX+XXX+XX+XX __13__ >CONSENSUS__13__ Length: 555 [gain: 40] ATGGCGTCGAGGTGACGAAGGCGTGTCAACTCCGGGAGTTGACGCTGCAAACAGTGCGGACGGTTGCAAACGTACCGCACTGACGCAATTTGCATGCTGTCGTGCAGCCGGGCTGCACGACGAAGCGCCATGCGATCAAGCCGGGCTTGATATCGCGCGCCCGCAGACAGGGTCTGCCGGCGAAGGGACACATTACCGTGCAGCCGGGCTGCACGAAGGAAAATGCGGTCAAGCCGGGCTTGATACCGCGCGCCCGCGGACAGGGTCCGCCGGCGAACGACTGTCCACGGCCGGGCCTGGACCAGAAGAACAACTGTGCGGAGCCGGGCTCCGCACAACAAGAAGACGGCGCAAGCGGAAAACGCTGCGCAAGTCTCGGTCCGGGACCGAGACGCAACAAGAGCAGTCTGCTGGGCAGACTGCGGCGGTGACGCCGAATGTCAAGACGCTAAGCGTCTTGACGCGCACCGATACTGGATTCCAGTATCGTGACATGGAACTCGCTAGTCCTCCGACGACGGCGTCGGAGTTGACTTCGCTTCCAGCCATGAGCTG OLD KEY: CCAGTATCGTGACATGGAACTCGCTAGTCCTCCGA NEW KEY: GCGTCGGAGTTGACTTCGCTTCCAGCCATGAGCTG ........ _A_ 0000000X0000X0000000000X000X00X00000XX0000000X010000X00000X00X0009000X000X2 __14__ ........ _T_ 000X00000XX000XX000XX0000000X0000X00001000XX00000000009X0000009000000090000 __14__ ........ _G_ X0X00XX0X00X00000X000000X0000X0X00XX0090X00000080X0X0000X000X00XX00X0000X08 __14__ ........ _C_ 0X00X00000000X00X0X00XX00XX00000X000000X0X00X0X0X0X00X000X0X000000X0X01X000 __14__ ........ _N_ 000000000000000000000000000000000000000000000000000000000000000000000000000 __14__ ........ ALL wwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwvvvuuttsrrrqqppoonligd __14__ ******** *** ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^**************************************** __14__ ######## CNS GCGTCGGAGTTGACTTCGCTTCCAGCCATGAGCTGGAAgCGCTTCACgCGCGACtTGCACGAtGGaCGCAtCGAg __14__ ######## QLT XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX+XXXXXXXX+XXXXXX+XXXXXXX+XX+XXXX+XXX+ __14__ >CONSENSUS__14__ Length: 595 [gain: 40] ATGGCGTCGAGGTGACGAAGGCGTGTCAACTCCGGGAGTTGACGCTGCAAACAGTGCGGACGGTTGCAAACGTACCGCACTGACGCAATTTGCATGCTGTCGTGCAGCCGGGCTGCACGACGAAGCGCCATGCGATCAAGCCGGGCTTGATATCGCGCGCCCGCAGACAGGGTCTGCCGGCGAAGGGACACATTACCGTGCAGCCGGGCTGCACGAAGGAAAATGCGGTCAAGCCGGGCTTGATACCGCGCGCCCGCGGACAGGGTCCGCCGGCGAACGACTGTCCACGGCCGGGCCTGGACCAGAAGAACAACTGTGCGGAGCCGGGCTCCGCACAACAAGAAGACGGCGCAAGCGGAAAACGCTGCGCAAGTCTCGGTCCGGGACCGAGACGCAACAAGAGCAGTCTGCTGGGCAGACTGCGGCGGTGACGCCGAATGTCAAGACGCTAAGCGTCTTGACGCGCACCGATACTGGATTCCAGTATCGTGACATGGAACTCGCTAGTCCTCCGACGACGGCGTCGGAGTTGACTTCGCTTCCAGCCATGAGCTGGAAGCGCTTCACGCGCGACTTGCACGATGGACGCATCGAG OLD KEY: GCGTCGGAGTTGACTTCGCTTCCAGCCATGAGCTG NEW KEY: GCTTCACGCGCGACTTGCACGATGGACGCATCGAG ........ _A_ 00000X000000X00000X00X000X000X000X00X70000000000000003X0X000XXX0XX001609000 __15__ ........ _T_ 00XX0000000000XX000000X0000000X00000000X0X0009X0XXX000000000000000000000000 __15__ ........ _G_ X000000X0X0X0000X000X00XX00X0000X0X003X000X0X0000000X7000X0X000X000X9091X0X __15__ ........ _C_ 0X00X0X0X0X00X000X0X000000X0X00X000X0000X00X000X000X000X00X0000000X00400090 __15__ ........ _N_ 000000000000000000000000000000000000000000000000000000000000000000000000000 __15__ ........ ALL OOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOwwwwwwwwwwwwwwwwwvvuttssrrqpoolhg __15__ ******** *** ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^**************************************** __15__ ######## CNS GCTTCACGCGCGACTTGCACGATGGACGCATCGAGCAaGTCTGCGtTCTTTCGgACAGCGAAAGAACGgagaGcG __15__ ######## QLT XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX@XXXXXXX+XXXXXXX@XXXXXXXXXXXXXX+!++X+X __15__ >CONSENSUS__15__ Length: 635 [gain: 40] ATGGCGTCGAGGTGACGAAGGCGTGTCAACTCCGGGAGTTGACGCTGCAAACAGTGCGGACGGTTGCAAACGTACCGCACTGACGCAATTTGCATGCTGTCGTGCAGCCGGGCTGCACGACGAAGCGCCATGCGATCAAGCCGGGCTTGATATCGCGCGCCCGCAGACAGGGTCTGCCGGCGAAGGGACACATTACCGTGCAGCCGGGCTGCACGAAGGAAAATGCGGTCAAGCCGGGCTTGATACCGCGCGCCCGCGGACAGGGTCCGCCGGCGAACGACTGTCCACGGCCGGGCCTGGACCAGAAGAACAACTGTGCGGAGCCGGGCTCCGCACAACAAGAAGACGGCGCAAGCGGAAAACGCTGCGCAAGTCTCGGTCCGGGACCGAGACGCAACAAGAGCAGTCTGCTGGGCAGACTGCGGCGGTGACGCCGAATGTCAAGACGCTAAGCGTCTTGACGCGCACCGATACTGGATTCCAGTATCGTGACATGGAACTCGCTAGTCCTCCGACGACGGCGTCGGAGTTGACTTCGCTTCCAGCCATGAGCTGGAAGCGCTTCACGCGCGACTTGCACGATGGACGCATCGAGCAAGTCTGCGTTCTTTCGGACAGCGAAAGAACGGAGAGCG OLD KEY: GCTTCACGCGCGACTTGCACGATGGACGCATCGAG NEW KEY: CTGCGTTCTTTCGGACAGCGAAAGAACGGAGAGCG ........ _A_ 00000000000000X0X000XXX0XX000X0X000X0X100XX0X0000X010X0000000X00009X00X0090 __16__ ........ _T_ 0X000XX0XXX000000000000000000000000000000000000X00000000909X00X000000900000 __16__ ........ _G_ 00X0X0000000XX000X0X000X000XX0X0X0X0X090X00X0X00X0X900X00000000XXX10X000000 __16__ ........ _C_ X00X000X000X000X00X0000000X000000X00000X000000X00000X00X1X00X0000000000XX0X __16__ ........ _N_ 000000000000000000000000000000000000000000000000000000000000000000000000000 __16__ ........ ALL ssssssssssssssssssssssssssssssssssssrrrrrrrrqqqqqqqpppppppooooonmllkjjihfdc __16__ ******** *** ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^**************************************** __16__ ######## CNS CTGCGTTCTTTCGGACAGCGAAAGAACGGAGAGCGAGAgCGAAGAGCTGAGgCAGCtCtTCATGGGaAGtACCaC __16__ ######## QLT XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX+XXXXXXXXXXXX+XXXX+X+XXXXXXX+XX+XXX+X __16__ >CONSENSUS__16__ Length: 675 [gain: 40] ATGGCGTCGAGGTGACGAAGGCGTGTCAACTCCGGGAGTTGACGCTGCAAACAGTGCGGACGGTTGCAAACGTACCGCACTGACGCAATTTGCATGCTGTCGTGCAGCCGGGCTGCACGACGAAGCGCCATGCGATCAAGCCGGGCTTGATATCGCGCGCCCGCAGACAGGGTCTGCCGGCGAAGGGACACATTACCGTGCAGCCGGGCTGCACGAAGGAAAATGCGGTCAAGCCGGGCTTGATACCGCGCGCCCGCGGACAGGGTCCGCCGGCGAACGACTGTCCACGGCCGGGCCTGGACCAGAAGAACAACTGTGCGGAGCCGGGCTCCGCACAACAAGAAGACGGCGCAAGCGGAAAACGCTGCGCAAGTCTCGGTCCGGGACCGAGACGCAACAAGAGCAGTCTGCTGGGCAGACTGCGGCGGTGACGCCGAATGTCAAGACGCTAAGCGTCTTGACGCGCACCGATACTGGATTCCAGTATCGTGACATGGAACTCGCTAGTCCTCCGACGACGGCGTCGGAGTTGACTTCGCTTCCAGCCATGAGCTGGAAGCGCTTCACGCGCGACTTGCACGATGGACGCATCGAGCAAGTCTGCGTTCTTTCGGACAGCGAAAGAACGGAGAGCGAGAGCGAAGAGCTGAGGCAGCTCTTCATGGGAAGTACCAC OLD KEY: CTGCGTTCTTTCGGACAGCGAAAGAACGGAGAGCG NEW KEY: GAAGAGCTGAGGCAGCTCTTCATGGGAAGTACCAC ........ _A_ 0XX0X0000X000X0000000X0000XX00X00X000X0X000XX0X0X00000X00000XX0X00XX000X0X0 __17__ ........ _T_ 0000000X00000000X0XX00X000000X00000X00000X00000000X0X000X000000000000000000 __17__ ........ _G_ X00X0X00X0XX00X00000000XXX00X0000000X0X0X0X00X000000000X0X0X00X00X00X0X0X0X __17__ ........ _C_ 000000X00000X00X0X00X0000000000XX0X000000000000X0X0X0X0000X00000X0000X00000 __17__ ........ _N_ 000000000000000000000000000000000000000000000000000000000000000000000000000 __17__ ........ ALL OOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOwwwwwwwwwwwwwwwvutssrrppoom __17__ ******** *** ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^**************************************** __17__ ######## CNS GAAGAGCTGAGGCAGCTCTTCATGGGAAGTACCACTGAGAGTGAAGACACTCTCAGTGCGAAGACGAAGCGAGAG __17__ ######## QLT XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX __17__ >CONSENSUS__17__ Length: 715 [gain: 40] ATGGCGTCGAGGTGACGAAGGCGTGTCAACTCCGGGAGTTGACGCTGCAAACAGTGCGGACGGTTGCAAACGTACCGCACTGACGCAATTTGCATGCTGTCGTGCAGCCGGGCTGCACGACGAAGCGCCATGCGATCAAGCCGGGCTTGATATCGCGCGCCCGCAGACAGGGTCTGCCGGCGAAGGGACACATTACCGTGCAGCCGGGCTGCACGAAGGAAAATGCGGTCAAGCCGGGCTTGATACCGCGCGCCCGCGGACAGGGTCCGCCGGCGAACGACTGTCCACGGCCGGGCCTGGACCAGAAGAACAACTGTGCGGAGCCGGGCTCCGCACAACAAGAAGACGGCGCAAGCGGAAAACGCTGCGCAAGTCTCGGTCCGGGACCGAGACGCAACAAGAGCAGTCTGCTGGGCAGACTGCGGCGGTGACGCCGAATGTCAAGACGCTAAGCGTCTTGACGCGCACCGATACTGGATTCCAGTATCGTGACATGGAACTCGCTAGTCCTCCGACGACGGCGTCGGAGTTGACTTCGCTTCCAGCCATGAGCTGGAAGCGCTTCACGCGCGACTTGCACGATGGACGCATCGAGCAAGTCTGCGTTCTTTCGGACAGCGAAAGAACGGAGAGCGAGAGCGAAGAGCTGAGGCAGCTCTTCATGGGAAGTACCACTGAGAGTGAAGACACTCTCAGTGCGAAGACGAAGCGAGAG OLD KEY: GAAGAGCTGAGGCAGCTCTTCATGGGAAGTACCAC NEW KEY: GTGAAGACACTCTCAGTGCGAAGACGAAGCGAGAG ........ _A_ 000XX0X0X00000X00000XX0X00XX000X0X00000000X00XX0XX0000000X0000001XX0000X000 __18__ ........ _T_ 0X00000000X0X000X000000000000000000000XX0000000000009X00000X001X0000X0000X0 __18__ ........ _G_ X0X00X000000000X0X0X00X00X00X0X0X0X0X0000X0XX00000XX00XXX0000X00900X00X0X00 __18__ ........ _C_ 0000000X0X0X0X0000X00000X0000X00000X0X00X000000X0000100000X0X09000000X0000X __18__ ........ _N_ 000000000000000000000000000000000000000000000000000000000000000000000000000 __18__ ........ ALL PPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPOOOOOOOOOOOOOwwwwwwwwwwwwwvuttsrrqponl __18__ ******** *** ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^**************************************** __18__ ######## CNS GTGAAGACACTCTCAGTGCGAAGACGAAGCGAGAGCGCTTCGAGGAACAAGGtTGGGACTCGcTgAAGTCGAGTC __18__ ######## QLT XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX+XXXXXXXXX+X+XXXXXXXXXX __18__ >CONSENSUS__18__ Length: 755 [gain: 40] ATGGCGTCGAGGTGACGAAGGCGTGTCAACTCCGGGAGTTGACGCTGCAAACAGTGCGGACGGTTGCAAACGTACCGCACTGACGCAATTTGCATGCTGTCGTGCAGCCGGGCTGCACGACGAAGCGCCATGCGATCAAGCCGGGCTTGATATCGCGCGCCCGCAGACAGGGTCTGCCGGCGAAGGGACACATTACCGTGCAGCCGGGCTGCACGAAGGAAAATGCGGTCAAGCCGGGCTTGATACCGCGCGCCCGCGGACAGGGTCCGCCGGCGAACGACTGTCCACGGCCGGGCCTGGACCAGAAGAACAACTGTGCGGAGCCGGGCTCCGCACAACAAGAAGACGGCGCAAGCGGAAAACGCTGCGCAAGTCTCGGTCCGGGACCGAGACGCAACAAGAGCAGTCTGCTGGGCAGACTGCGGCGGTGACGCCGAATGTCAAGACGCTAAGCGTCTTGACGCGCACCGATACTGGATTCCAGTATCGTGACATGGAACTCGCTAGTCCTCCGACGACGGCGTCGGAGTTGACTTCGCTTCCAGCCATGAGCTGGAAGCGCTTCACGCGCGACTTGCACGATGGACGCATCGAGCAAGTCTGCGTTCTTTCGGACAGCGAAAGAACGGAGAGCGAGAGCGAAGAGCTGAGGCAGCTCTTCATGGGAAGTACCACTGAGAGTGAAGACACTCTCAGTGCGAAGACGAAGCGAGAGCGCTTCGAGGAACAAGGTTGGGACTCGCTGAAGTCGAGTC OLD KEY: GTGAAGACACTCTCAGTGCGAAGACGAAGCGAGAG NEW KEY: CGAGGAACAAGGTTGGGACTCGCTGAAGTCGAGTC ........ _A_ 00X00XX0XX0000000X0000000XX0000X000000X00X00XX001000X000X00X0XXX0X000X00000 __19__ ........ _T_ 000000000000XX00000X000X0000X0000X000X0XX000009X09X0000000X000000000X00X000 __19__ ........ _G_ 0X0XX00000XX00XXX0000X00X00X00X0X0000000000X0000800X0XXX0X000000X00X0000000 __19__ ........ _C_ X000000X0000000000X0X0X000000X0000XXX00000X00010010000000000X00000X000X0XXX __19__ ........ _N_ 000000000000000000000000000000000000000000000000000000000000000000000000000 __19__ ........ ALL PPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPOOOOOOOOOOOwwwwwwwwwwwwwwvuutsrrqqpoom __19__ ******** *** ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^**************************************** __19__ ######## CNS CGAGGAACAAGGTTGGGACTCGCTGAAGTCGAGTCCCTATTACGAAtTgtTGAGGGAGTACAAAGACGTACTCCC __19__ ######## QLT XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX+X++XXXXXXXXXXXXXXXXXXXXXXXXX __19__ >CONSENSUS__19__ Length: 795 [gain: 40] ATGGCGTCGAGGTGACGAAGGCGTGTCAACTCCGGGAGTTGACGCTGCAAACAGTGCGGACGGTTGCAAACGTACCGCACTGACGCAATTTGCATGCTGTCGTGCAGCCGGGCTGCACGACGAAGCGCCATGCGATCAAGCCGGGCTTGATATCGCGCGCCCGCAGACAGGGTCTGCCGGCGAAGGGACACATTACCGTGCAGCCGGGCTGCACGAAGGAAAATGCGGTCAAGCCGGGCTTGATACCGCGCGCCCGCGGACAGGGTCCGCCGGCGAACGACTGTCCACGGCCGGGCCTGGACCAGAAGAACAACTGTGCGGAGCCGGGCTCCGCACAACAAGAAGACGGCGCAAGCGGAAAACGCTGCGCAAGTCTCGGTCCGGGACCGAGACGCAACAAGAGCAGTCTGCTGGGCAGACTGCGGCGGTGACGCCGAATGTCAAGACGCTAAGCGTCTTGACGCGCACCGATACTGGATTCCAGTATCGTGACATGGAACTCGCTAGTCCTCCGACGACGGCGTCGGAGTTGACTTCGCTTCCAGCCATGAGCTGGAAGCGCTTCACGCGCGACTTGCACGATGGACGCATCGAGCAAGTCTGCGTTCTTTCGGACAGCGAAAGAACGGAGAGCGAGAGCGAAGAGCTGAGGCAGCTCTTCATGGGAAGTACCACTGAGAGTGAAGACACTCTCAGTGCGAAGACGAAGCGAGAGCGCTTCGAGGAACAAGGTTGGGACTCGCTGAAGTCGAGTCCCTATTACGAATTGTTGAGGGAGTACAAAGACGTACTCCC OLD KEY: CGAGGAACAAGGTTGGGACTCGCTGAAGTCGAGTC NEW KEY: TACGAATTGTTGAGGGAGTACAAAGACGTACTCCC ........ _A_ 0X00XX000000X000X00X0XXX0X000X0000000XX0X0X000000000X00000000X00X0XX0000X01 __20__ ........ _T_ X00000XX0XX0000000X000000000X00X00000000000XX00X0000000XX00000000X0000010X9 __20__ ........ _G_ 000X0000X00X0XXX0X000000X00X0000000XX00X05000000X0XX0X00000X00XX0000XXX0000 __20__ ........ _C_ 00X00000000000000000X00000X000X0XXX0000004000XX00X0000X00XX0X00000000009000 __20__ ........ _N_ 000000000000000000000000000000000000000000000000000000000000000000000000000 __20__ ........ ALL OOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOwwwwwwwwwwwwwwwwwwvvuutsrqppook __20__ ******** *** ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^**************************************** __20__ ######## CNS TACGAATTGTTGAGGGAGTACAAAGACGTACTCCCGGAAGAgATTCCTGCGGAGCTTCCGCAGGATAAGGGcATt __20__ ######## QLT XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX?XXXXXXXXXXXXXXXXXXXXXXXXXXXXX+XX+ __20__ >CONSENSUS__20__ Length: 835 [gain: 40] ATGGCGTCGAGGTGACGAAGGCGTGTCAACTCCGGGAGTTGACGCTGCAAACAGTGCGGACGGTTGCAAACGTACCGCACTGACGCAATTTGCATGCTGTCGTGCAGCCGGGCTGCACGACGAAGCGCCATGCGATCAAGCCGGGCTTGATATCGCGCGCCCGCAGACAGGGTCTGCCGGCGAAGGGACACATTACCGTGCAGCCGGGCTGCACGAAGGAAAATGCGGTCAAGCCGGGCTTGATACCGCGCGCCCGCGGACAGGGTCCGCCGGCGAACGACTGTCCACGGCCGGGCCTGGACCAGAAGAACAACTGTGCGGAGCCGGGCTCCGCACAACAAGAAGACGGCGCAAGCGGAAAACGCTGCGCAAGTCTCGGTCCGGGACCGAGACGCAACAAGAGCAGTCTGCTGGGCAGACTGCGGCGGTGACGCCGAATGTCAAGACGCTAAGCGTCTTGACGCGCACCGATACTGGATTCCAGTATCGTGACATGGAACTCGCTAGTCCTCCGACGACGGCGTCGGAGTTGACTTCGCTTCCAGCCATGAGCTGGAAGCGCTTCACGCGCGACTTGCACGATGGACGCATCGAGCAAGTCTGCGTTCTTTCGGACAGCGAAAGAACGGAGAGCGAGAGCGAAGAGCTGAGGCAGCTCTTCATGGGAAGTACCACTGAGAGTGAAGACACTCTCAGTGCGAAGACGAAGCGAGAGCGCTTCGAGGAACAAGGTTGGGACTCGCTGAAGTCGAGTCCCTATTACGAATTGTTGAGGGAGTACAAAGACGTACTCCCGGAAGAGATTCCTGCGGAGCTTCCGCAGGATAAGGGCATT OLD KEY: TACGAATTGTTGAGGGAGTACAAAGACGTACTCCC NEW KEY: AGATTCCTGCGGAGCTTCCGCAGGATAAGGGCATT ........ _A_ X0X000000000X00000000X00X0XX0000X000X00X00X0X000X0000000000000X00XX00X00000 __21__ ........ _T_ 000XX00X0000000XX00000000X0000000XX0000000000XX00X0X00X0000000000000X01X0X0 __21__ ........ _G_ 0X000000X0XX0X00000X00XX0000XXX000000X000X0X000X00000X0X00XXX00090090000X0X __21__ ........ _C_ 00000XX00X0000X00XX0X0000000000X000X00X0X000000000X0X000XX000X0X00000090000 __21__ ........ _N_ 000000000000000000000000000000000000000000000000000000000000000000000000000 __21__ ........ ALL wwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwvvvuuttssrrrrqqqqpppoomjh __21__ ******** *** ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^**************************************** __21__ ######## CNS AGATTCCTGCGGAGCTTCCGCAGGATAAGGGCATTCAGCACGAGATTGATCTCGTGCCGGGCACgAAgTAcTGTG __21__ ######## QLT XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX+XX+XX+XXXX __21__ >CONSENSUS__21__ Length: 875 [gain: 40] ATGGCGTCGAGGTGACGAAGGCGTGTCAACTCCGGGAGTTGACGCTGCAAACAGTGCGGACGGTTGCAAACGTACCGCACTGACGCAATTTGCATGCTGTCGTGCAGCCGGGCTGCACGACGAAGCGCCATGCGATCAAGCCGGGCTTGATATCGCGCGCCCGCAGACAGGGTCTGCCGGCGAAGGGACACATTACCGTGCAGCCGGGCTGCACGAAGGAAAATGCGGTCAAGCCGGGCTTGATACCGCGCGCCCGCGGACAGGGTCCGCCGGCGAACGACTGTCCACGGCCGGGCCTGGACCAGAAGAACAACTGTGCGGAGCCGGGCTCCGCACAACAAGAAGACGGCGCAAGCGGAAAACGCTGCGCAAGTCTCGGTCCGGGACCGAGACGCAACAAGAGCAGTCTGCTGGGCAGACTGCGGCGGTGACGCCGAATGTCAAGACGCTAAGCGTCTTGACGCGCACCGATACTGGATTCCAGTATCGTGACATGGAACTCGCTAGTCCTCCGACGACGGCGTCGGAGTTGACTTCGCTTCCAGCCATGAGCTGGAAGCGCTTCACGCGCGACTTGCACGATGGACGCATCGAGCAAGTCTGCGTTCTTTCGGACAGCGAAAGAACGGAGAGCGAGAGCGAAGAGCTGAGGCAGCTCTTCATGGGAAGTACCACTGAGAGTGAAGACACTCTCAGTGCGAAGACGAAGCGAGAGCGCTTCGAGGAACAAGGTTGGGACTCGCTGAAGTCGAGTCCCTATTACGAATTGTTGAGGGAGTACAAAGACGTACTCCCGGAAGAGATTCCTGCGGAGCTTCCGCAGGATAAGGGCATTCAGCACGAGATTGATCTCGTGCCGGGCACGAAGTACTGTG OLD KEY: AGATTCCTGCGGAGCTTCCGCAGGATAAGGGCATT NEW KEY: CGAGATTGATCTCGTGCCGGGCACGAAGTACTGTG ........ _A_ 00X0X000X0000000000000X00XX00X0000000X000000900000090000000080910990049X910 __22__ ........ _T_ 00000XX00X0X00X0000000000000X00X0X0X000000000090000008000000000000007000000 __22__ ........ _G_ 0X0X000X00000X0X00XXX000X00X0000X0X0000X0XX00X1XX000009009091X19000X2610190 __22__ ........ _C_ X000000000X0X000XX000X0X000000X00000X0X0X00X100009X0X109X1X0000091000000009 __22__ ........ _N_ 000000000000000000000000000000000000000000000000000000000000000000000000000 __22__ ........ ALL OOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOwwwwwwwwwwwwwwwwvuttssrqqpoomj __22__ ******** *** ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^**************************************** __22__ ######## CNS CGAGATTGATCTCGTGCCGGGCACGAAGTACTGTGTCACGCGGCaGtGGcCaCtgcCgCgaGagcaaGtgaAagc __22__ ######## QLT XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX+X+XX+X+X+++X+X++X+++++X@!+X+++ __22__ >CONSENSUS__22__ Length: 915 [gain: 40] ATGGCGTCGAGGTGACGAAGGCGTGTCAACTCCGGGAGTTGACGCTGCAAACAGTGCGGACGGTTGCAAACGTACCGCACTGACGCAATTTGCATGCTGTCGTGCAGCCGGGCTGCACGACGAAGCGCCATGCGATCAAGCCGGGCTTGATATCGCGCGCCCGCAGACAGGGTCTGCCGGCGAAGGGACACATTACCGTGCAGCCGGGCTGCACGAAGGAAAATGCGGTCAAGCCGGGCTTGATACCGCGCGCCCGCGGACAGGGTCCGCCGGCGAACGACTGTCCACGGCCGGGCCTGGACCAGAAGAACAACTGTGCGGAGCCGGGCTCCGCACAACAAGAAGACGGCGCAAGCGGAAAACGCTGCGCAAGTCTCGGTCCGGGACCGAGACGCAACAAGAGCAGTCTGCTGGGCAGACTGCGGCGGTGACGCCGAATGTCAAGACGCTAAGCGTCTTGACGCGCACCGATACTGGATTCCAGTATCGTGACATGGAACTCGCTAGTCCTCCGACGACGGCGTCGGAGTTGACTTCGCTTCCAGCCATGAGCTGGAAGCGCTTCACGCGCGACTTGCACGATGGACGCATCGAGCAAGTCTGCGTTCTTTCGGACAGCGAAAGAACGGAGAGCGAGAGCGAAGAGCTGAGGCAGCTCTTCATGGGAAGTACCACTGAGAGTGAAGACACTCTCAGTGCGAAGACGAAGCGAGAGCGCTTCGAGGAACAAGGTTGGGACTCGCTGAAGTCGAGTCCCTATTACGAATTGTTGAGGGAGTACAAAGACGTACTCCCGGAAGAGATTCCTGCGGAGCTTCCGCAGGATAAGGGCATTCAGCACGAGATTGATCTCGTGCCGGGCACGAAGTACTGTGTCACGCGGCAGTGGCCACTGCCGCGAGAGCAAGTGAAAGC OLD KEY: CGAGATTGATCTCGTGCCGGGCACGAAGTACTGTG NEW KEY: CGGCAGTGGCCACTGCCGCGAGAGCAAGTGAAAGC ........ _A_ 0000X000000X00000000X0X00XX000XXX000X000X00X00000000XXX00000000XXX00X00X0XX __23__ ........ _T_ 000000X000000X00000000000000X00000000X0000000XX0XXX00000X00X009000000000000 __23__ ........ _G_ 0XX00X0XX00000X00X0X0X0X000X0X000X0X000X00X00000000X000X00X00X0000X00XX0000 __23__ ........ _C_ X00X00000XX0X00XX0X00000X000000000X000X00X00X00X000000000X00X010000X0000X00 __23__ ........ _N_ 000000000000000000000000000000000000000000000000000000000000000000000000000 __23__ ........ ALL wwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwvvvuuuuuttttssrrrrqqqqppppooonnlkigdc __23__ ******** *** ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^**************************************** __23__ ######## CNS CGGCAGTGGCCACTGCCGCGAGAGCAAGTGAAAGCGATCGACGACTTCTTTGAAAGTCGTCGtAAAGCAGGACAA __23__ ######## QLT XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX+XXXXXXXXXXXX __23__ >CONSENSUS__23__ Length: 955 [gain: 40] ATGGCGTCGAGGTGACGAAGGCGTGTCAACTCCGGGAGTTGACGCTGCAAACAGTGCGGACGGTTGCAAACGTACCGCACTGACGCAATTTGCATGCTGTCGTGCAGCCGGGCTGCACGACGAAGCGCCATGCGATCAAGCCGGGCTTGATATCGCGCGCCCGCAGACAGGGTCTGCCGGCGAAGGGACACATTACCGTGCAGCCGGGCTGCACGAAGGAAAATGCGGTCAAGCCGGGCTTGATACCGCGCGCCCGCGGACAGGGTCCGCCGGCGAACGACTGTCCACGGCCGGGCCTGGACCAGAAGAACAACTGTGCGGAGCCGGGCTCCGCACAACAAGAAGACGGCGCAAGCGGAAAACGCTGCGCAAGTCTCGGTCCGGGACCGAGACGCAACAAGAGCAGTCTGCTGGGCAGACTGCGGCGGTGACGCCGAATGTCAAGACGCTAAGCGTCTTGACGCGCACCGATACTGGATTCCAGTATCGTGACATGGAACTCGCTAGTCCTCCGACGACGGCGTCGGAGTTGACTTCGCTTCCAGCCATGAGCTGGAAGCGCTTCACGCGCGACTTGCACGATGGACGCATCGAGCAAGTCTGCGTTCTTTCGGACAGCGAAAGAACGGAGAGCGAGAGCGAAGAGCTGAGGCAGCTCTTCATGGGAAGTACCACTGAGAGTGAAGACACTCTCAGTGCGAAGACGAAGCGAGAGCGCTTCGAGGAACAAGGTTGGGACTCGCTGAAGTCGAGTCCCTATTACGAATTGTTGAGGGAGTACAAAGACGTACTCCCGGAAGAGATTCCTGCGGAGCTTCCGCAGGATAAGGGCATTCAGCACGAGATTGATCTCGTGCCGGGCACGAAGTACTGTGTCACGCGGCAGTGGCCACTGCCGCGAGAGCAAGTGAAAGCGATCGACGACTTCTTTGAAAGTCGTCGTAAAGCAGGACAA OLD KEY: CGGCAGTGGCCACTGCCGCGAGAGCAAGTGAAAGC NEW KEY: ACGACTTCTTTGAAAGTCGTCGTAAAGCAGGACAA ........ _A_ X00X00000000XXX00000000XXX00X00X0XX0000000XX00XXX00000000X0X00000000X000000 __24__ ........ _T_ 00000XX0XXX00000X00X00X0000000000000X0000000X00000X0000000000X00X000000XX0X __24__ ........ _G_ 00X00000000X000X00X00X0000X00XX0000X0X0XXX0000000X00000X0000X0X0000X00X0000 __24__ ........ _C_ 0X00X00X000000000X00X000000X0000X00000X000000X00000XXXX0X0X0000X0XX00X000X0 __24__ ........ _N_ 000000000000000000000000000000000000000000000000000000000000000000000000000 __24__ ........ ALL wwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwvvuuuttsssrqpppooolj __24__ ******** *** ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^**************************************** __24__ ######## CNS ACGACTTCTTTGAAAGTCGTCGTAAAGCAGGACAAGTGCGGGAATCAAAGTCCCCGCACAGTGCTCCGACGTTCT __24__ ######## QLT XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX __24__ >CONSENSUS__24__ Length: 995 [gain: 40] ATGGCGTCGAGGTGACGAAGGCGTGTCAACTCCGGGAGTTGACGCTGCAAACAGTGCGGACGGTTGCAAACGTACCGCACTGACGCAATTTGCATGCTGTCGTGCAGCCGGGCTGCACGACGAAGCGCCATGCGATCAAGCCGGGCTTGATATCGCGCGCCCGCAGACAGGGTCTGCCGGCGAAGGGACACATTACCGTGCAGCCGGGCTGCACGAAGGAAAATGCGGTCAAGCCGGGCTTGATACCGCGCGCCCGCGGACAGGGTCCGCCGGCGAACGACTGTCCACGGCCGGGCCTGGACCAGAAGAACAACTGTGCGGAGCCGGGCTCCGCACAACAAGAAGACGGCGCAAGCGGAAAACGCTGCGCAAGTCTCGGTCCGGGACCGAGACGCAACAAGAGCAGTCTGCTGGGCAGACTGCGGCGGTGACGCCGAATGTCAAGACGCTAAGCGTCTTGACGCGCACCGATACTGGATTCCAGTATCGTGACATGGAACTCGCTAGTCCTCCGACGACGGCGTCGGAGTTGACTTCGCTTCCAGCCATGAGCTGGAAGCGCTTCACGCGCGACTTGCACGATGGACGCATCGAGCAAGTCTGCGTTCTTTCGGACAGCGAAAGAACGGAGAGCGAGAGCGAAGAGCTGAGGCAGCTCTTCATGGGAAGTACCACTGAGAGTGAAGACACTCTCAGTGCGAAGACGAAGCGAGAGCGCTTCGAGGAACAAGGTTGGGACTCGCTGAAGTCGAGTCCCTATTACGAATTGTTGAGGGAGTACAAAGACGTACTCCCGGAAGAGATTCCTGCGGAGCTTCCGCAGGATAAGGGCATTCAGCACGAGATTGATCTCGTGCCGGGCACGAAGTACTGTGTCACGCGGCAGTGGCCACTGCCGCGAGAGCAAGTGAAAGCGATCGACGACTTCTTTGAAAGTCGTCGTAAAGCAGGACAAGTGCGGGAATCAAAGTCCCCGCACAGTGCTCCGACGTTCT OLD KEY: ACGACTTCTTTGAAAGTCGTCGTAAAGCAGGACAA NEW KEY: GGAATCAAAGTCCCCGCACAGTGCTCCGACGTTCT ........ _A_ 00XX00XXX00000000X0X00000000X00000000000XX4X9000X0X0000009000000X000000X000 __25__ ........ _T_ 0000X00000X0000000000X00X000000XX0X0X0X0000000000000000000X000000X00XX00X00 __25__ ........ _G_ XX0000000X00000X0000X0X0000X00X0000X0X0000600X00000XXX0XX00XX0X0000X00000X0 __25__ ........ _C_ 00000X00000XXXX0X0X0000X0XX00X000X00000X000000XX0X0000X000000X0X00X000X000X __25__ ........ _N_ 000000000000000000000000000000000000000000000000000000000000000000000000000 __25__ ........ ALL OOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOwwwwwwwwwwwwwwvvuutssrrqppomj __25__ ******** *** ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^**************************************** __25__ ######## CNS GGAATCAAAGTCCCCGCACAGTGCTCCGACGTTCTGTGTCAAgAaGCCACAGGGCGGaTGGCGCATCGTTCATGC __25__ ######## QLT XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX!X+XXXXXXXXXXXX+XXXXXXXXXXXXXXXXX __25__ >CONSENSUS__25__ Length: 1035 [gain: 40] ATGGCGTCGAGGTGACGAAGGCGTGTCAACTCCGGGAGTTGACGCTGCAAACAGTGCGGACGGTTGCAAACGTACCGCACTGACGCAATTTGCATGCTGTCGTGCAGCCGGGCTGCACGACGAAGCGCCATGCGATCAAGCCGGGCTTGATATCGCGCGCCCGCAGACAGGGTCTGCCGGCGAAGGGACACATTACCGTGCAGCCGGGCTGCACGAAGGAAAATGCGGTCAAGCCGGGCTTGATACCGCGCGCCCGCGGACAGGGTCCGCCGGCGAACGACTGTCCACGGCCGGGCCTGGACCAGAAGAACAACTGTGCGGAGCCGGGCTCCGCACAACAAGAAGACGGCGCAAGCGGAAAACGCTGCGCAAGTCTCGGTCCGGGACCGAGACGCAACAAGAGCAGTCTGCTGGGCAGACTGCGGCGGTGACGCCGAATGTCAAGACGCTAAGCGTCTTGACGCGCACCGATACTGGATTCCAGTATCGTGACATGGAACTCGCTAGTCCTCCGACGACGGCGTCGGAGTTGACTTCGCTTCCAGCCATGAGCTGGAAGCGCTTCACGCGCGACTTGCACGATGGACGCATCGAGCAAGTCTGCGTTCTTTCGGACAGCGAAAGAACGGAGAGCGAGAGCGAAGAGCTGAGGCAGCTCTTCATGGGAAGTACCACTGAGAGTGAAGACACTCTCAGTGCGAAGACGAAGCGAGAGCGCTTCGAGGAACAAGGTTGGGACTCGCTGAAGTCGAGTCCCTATTACGAATTGTTGAGGGAGTACAAAGACGTACTCCCGGAAGAGATTCCTGCGGAGCTTCCGCAGGATAAGGGCATTCAGCACGAGATTGATCTCGTGCCGGGCACGAAGTACTGTGTCACGCGGCAGTGGCCACTGCCGCGAGAGCAAGTGAAAGCGATCGACGACTTCTTTGAAAGTCGTCGTAAAGCAGGACAAGTGCGGGAATCAAAGTCCCCGCACAGTGCTCCGACGTTCTGTGTCAAGAAGCCACAGGGCGGATGGCGCATCGTTCATGC OLD KEY: GGAATCAAAGTCCCCGCACAGTGCTCCGACGTTCT NEW KEY: AAGAAGCCACAGGGCGGATGGCGCATCGTTCATGC ........ _A_ XX0XX000X0X000000X000000X000000X00000X0XX0XX0000XX00X0000X0000X000000090X01 __26__ ........ _T_ 000000000000000000X000000X00XX00X001X010000000X000000X000000090000000000000 __26__ ........ _G_ 00X00X00000XXX0XX00XX0X0000X00000X0100000000X00X000X00X0X00XX0000XX0X00X009 __26__ ........ _C_ 000000XX0X0000X000000X0X00X000X000X800900X000X0000X0000X00X0000XX00X0X000X0 __26__ ........ _N_ 000000000000000000000000000000000000000000000000000000000000000000000000000 __26__ ........ ALL wwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwvvvuuttsssrrqqpppooonlj __26__ ******** *** ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^**************************************** __26__ ######## CNS AAGAAGCCACAGGGCGGATGGCGCATCGTTCATGCcTAcAACAAGCTGAACGATGCGACGGtACCGGCGCaGACg __26__ ######## QLT XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX+XX+XXXXXXXXXXXXXXXXXXXXXX+XXXXXXXX+XXX+ __26__ >CONSENSUS__26__ Length: 1075 [gain: 40] ATGGCGTCGAGGTGACGAAGGCGTGTCAACTCCGGGAGTTGACGCTGCAAACAGTGCGGACGGTTGCAAACGTACCGCACTGACGCAATTTGCATGCTGTCGTGCAGCCGGGCTGCACGACGAAGCGCCATGCGATCAAGCCGGGCTTGATATCGCGCGCCCGCAGACAGGGTCTGCCGGCGAAGGGACACATTACCGTGCAGCCGGGCTGCACGAAGGAAAATGCGGTCAAGCCGGGCTTGATACCGCGCGCCCGCGGACAGGGTCCGCCGGCGAACGACTGTCCACGGCCGGGCCTGGACCAGAAGAACAACTGTGCGGAGCCGGGCTCCGCACAACAAGAAGACGGCGCAAGCGGAAAACGCTGCGCAAGTCTCGGTCCGGGACCGAGACGCAACAAGAGCAGTCTGCTGGGCAGACTGCGGCGGTGACGCCGAATGTCAAGACGCTAAGCGTCTTGACGCGCACCGATACTGGATTCCAGTATCGTGACATGGAACTCGCTAGTCCTCCGACGACGGCGTCGGAGTTGACTTCGCTTCCAGCCATGAGCTGGAAGCGCTTCACGCGCGACTTGCACGATGGACGCATCGAGCAAGTCTGCGTTCTTTCGGACAGCGAAAGAACGGAGAGCGAGAGCGAAGAGCTGAGGCAGCTCTTCATGGGAAGTACCACTGAGAGTGAAGACACTCTCAGTGCGAAGACGAAGCGAGAGCGCTTCGAGGAACAAGGTTGGGACTCGCTGAAGTCGAGTCCCTATTACGAATTGTTGAGGGAGTACAAAGACGTACTCCCGGAAGAGATTCCTGCGGAGCTTCCGCAGGATAAGGGCATTCAGCACGAGATTGATCTCGTGCCGGGCACGAAGTACTGTGTCACGCGGCAGTGGCCACTGCCGCGAGAGCAAGTGAAAGCGATCGACGACTTCTTTGAAAGTCGTCGTAAAGCAGGACAAGTGCGGGAATCAAAGTCCCCGCACAGTGCTCCGACGTTCTGTGTCAAGAAGCCACAGGGCGGATGGCGCATCGTTCATGCCTACAACAAGCTGAACGATGCGACGGTACCGGCGCAGACG OLD KEY: AAGAAGCCACAGGGCGGATGGCGCATCGTTCATGC NEW KEY: ACAAGCTGAACGATGCGACGGTACCGGCGCAGACG ........ _A_ X0XX0000XX00X0000X0000X0000000X0X00000X0X00400XXXX0X0000X00X000X0000X000000 __27__ ........ _T_ 000000X000000X0000000X00000000000000000X000000000000X0X90X00X000XX000X00100 __27__ ........ _G_ 0000X00X000X00X0X00XX0000XX0X00X00X00X0000050X0000X00X00000000X0000900X900X __27__ ........ _C_ 0X000X0000X0000X00X0000XX00X0X000X0XX0000XX0X0000000000100X00X0000X00000990 __27__ ........ _N_ 000000000000000000000000000000000000000000000000000000000000000000000000000 __27__ ........ ALL OOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOwwwwwwwwwwwwwwvvusrrqqponk __27__ ******** *** ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^**************************************** __27__ ######## CNS ACAAGCTGAACGATGCGACGGTACCGGCGCAGACGCCGATACCgCGAAAAGATGTtATCATCGATTCgATGgccG __27__ ######## QLT XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX?XXXXXXXXXXX+XXXXXXXXXXX+XXX+++X __27__ >CONSENSUS__27__ Length: 1115 [gain: 40] ATGGCGTCGAGGTGACGAAGGCGTGTCAACTCCGGGAGTTGACGCTGCAAACAGTGCGGACGGTTGCAAACGTACCGCACTGACGCAATTTGCATGCTGTCGTGCAGCCGGGCTGCACGACGAAGCGCCATGCGATCAAGCCGGGCTTGATATCGCGCGCCCGCAGACAGGGTCTGCCGGCGAAGGGACACATTACCGTGCAGCCGGGCTGCACGAAGGAAAATGCGGTCAAGCCGGGCTTGATACCGCGCGCCCGCGGACAGGGTCCGCCGGCGAACGACTGTCCACGGCCGGGCCTGGACCAGAAGAACAACTGTGCGGAGCCGGGCTCCGCACAACAAGAAGACGGCGCAAGCGGAAAACGCTGCGCAAGTCTCGGTCCGGGACCGAGACGCAACAAGAGCAGTCTGCTGGGCAGACTGCGGCGGTGACGCCGAATGTCAAGACGCTAAGCGTCTTGACGCGCACCGATACTGGATTCCAGTATCGTGACATGGAACTCGCTAGTCCTCCGACGACGGCGTCGGAGTTGACTTCGCTTCCAGCCATGAGCTGGAAGCGCTTCACGCGCGACTTGCACGATGGACGCATCGAGCAAGTCTGCGTTCTTTCGGACAGCGAAAGAACGGAGAGCGAGAGCGAAGAGCTGAGGCAGCTCTTCATGGGAAGTACCACTGAGAGTGAAGACACTCTCAGTGCGAAGACGAAGCGAGAGCGCTTCGAGGAACAAGGTTGGGACTCGCTGAAGTCGAGTCCCTATTACGAATTGTTGAGGGAGTACAAAGACGTACTCCCGGAAGAGATTCCTGCGGAGCTTCCGCAGGATAAGGGCATTCAGCACGAGATTGATCTCGTGCCGGGCACGAAGTACTGTGTCACGCGGCAGTGGCCACTGCCGCGAGAGCAAGTGAAAGCGATCGACGACTTCTTTGAAAGTCGTCGTAAAGCAGGACAAGTGCGGGAATCAAAGTCCCCGCACAGTGCTCCGACGTTCTGTGTCAAGAAGCCACAGGGCGGATGGCGCATCGTTCATGCCTACAACAAGCTGAACGATGCGACGGTACCGGCGCAGACGCCGATACCGCGAAAAGATGTTATCATCGATTCGATGGCCG OLD KEY: ACAAGCTGAACGATGCGACGGTACCGGCGCAGACG NEW KEY: ACCGCGAAAAGATGTTATCATCGATTCGATGGCCG ........ _A_ X00000XXXX0X0000X00X000X0000X00000000X00X000000X0X000000000X000100X0X000X00 __28__ ........ _T_ 000000000000X0XX0X00X000XX000X00000000000000XXX0000X00X0X0000XX0000008000XX __28__ ........ _G_ 000X0X0000X00X00000000X0000X00XX00XXX0X0000X000000X0X00000X000090X0X00XX000 __28__ ........ _C_ 0XX0X0000000000000X00X0000X00000XX00000X0XX00000X0000X0X0X00X000X0000200000 __28__ ........ _N_ 000000000000000000000000000000000000000000000000000000000000000000000000000 __28__ ........ ALL wwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwvvvvuuttsssrrqqpppponli __28__ ******** *** ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^**************************************** __28__ ######## CNS ACCGCGAAAAGATGTTATCATCGATTCGATGGCCGGGAGCACCGTTTACAGTGCTCTCGACTTgCGAGAtGGATT __28__ ######## QLT XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX+XXXXX+XXXXX __28__ >CONSENSUS__28__ Length: 1155 [gain: 40] ATGGCGTCGAGGTGACGAAGGCGTGTCAACTCCGGGAGTTGACGCTGCAAACAGTGCGGACGGTTGCAAACGTACCGCACTGACGCAATTTGCATGCTGTCGTGCAGCCGGGCTGCACGACGAAGCGCCATGCGATCAAGCCGGGCTTGATATCGCGCGCCCGCAGACAGGGTCTGCCGGCGAAGGGACACATTACCGTGCAGCCGGGCTGCACGAAGGAAAATGCGGTCAAGCCGGGCTTGATACCGCGCGCCCGCGGACAGGGTCCGCCGGCGAACGACTGTCCACGGCCGGGCCTGGACCAGAAGAACAACTGTGCGGAGCCGGGCTCCGCACAACAAGAAGACGGCGCAAGCGGAAAACGCTGCGCAAGTCTCGGTCCGGGACCGAGACGCAACAAGAGCAGTCTGCTGGGCAGACTGCGGCGGTGACGCCGAATGTCAAGACGCTAAGCGTCTTGACGCGCACCGATACTGGATTCCAGTATCGTGACATGGAACTCGCTAGTCCTCCGACGACGGCGTCGGAGTTGACTTCGCTTCCAGCCATGAGCTGGAAGCGCTTCACGCGCGACTTGCACGATGGACGCATCGAGCAAGTCTGCGTTCTTTCGGACAGCGAAAGAACGGAGAGCGAGAGCGAAGAGCTGAGGCAGCTCTTCATGGGAAGTACCACTGAGAGTGAAGACACTCTCAGTGCGAAGACGAAGCGAGAGCGCTTCGAGGAACAAGGTTGGGACTCGCTGAAGTCGAGTCCCTATTACGAATTGTTGAGGGAGTACAAAGACGTACTCCCGGAAGAGATTCCTGCGGAGCTTCCGCAGGATAAGGGCATTCAGCACGAGATTGATCTCGTGCCGGGCACGAAGTACTGTGTCACGCGGCAGTGGCCACTGCCGCGAGAGCAAGTGAAAGCGATCGACGACTTCTTTGAAAGTCGTCGTAAAGCAGGACAAGTGCGGGAATCAAAGTCCCCGCACAGTGCTCCGACGTTCTGTGTCAAGAAGCCACAGGGCGGATGGCGCATCGTTCATGCCTACAACAAGCTGAACGATGCGACGGTACCGGCGCAGACGCCGATACCGCGAAAAGATGTTATCATCGATTCGATGGCCGGGAGCACCGTTTACAGTGCTCTCGACTTGCGAGATGGATT OLD KEY: ACCGCGAAAAGATGTTATCATCGATTCGATGGCCG NEW KEY: ACCGTTTACAGTGCTCTCGACTTGCGAGATGGATT ........ _A_ X000000X0X000000000X000000X0X000X0000X00X8X0000XX000000X0X000X0X00000000X00 __29__ ........ _T_ 0000XXX0000X00X0X0000XX000000X000XX7X0X0000X00X00X000X0000000090X000X0X0000 __29__ ........ _G_ 000X000000X0X00000X0000X0X0X00XX000000000100000000X0X0X0X0X0X0000000000000X __29__ ........ _C_ 0XX00000X0000X0X0X00X000X00000000003000X0000XX00000X0000000900100XXX0X0X0X0 __29__ ........ _N_ 000000000000000000000000000000000000000000000000000000000000000000000000000 __29__ ........ ALL PPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPOOOOOOOOOOOOOOwwwwwwwwwwwwwvuutsssrqpomk __29__ ******** *** ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^**************************************** __29__ ######## CNS ACCGTTTACAGTGCTCTCGACTTGCGAGATGGATTtTATCAaATCCTAATGCGTGAGAGcGAtATCCCTCTCACG __29__ ######## QLT XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX@XXXXX+XXXXXXXXXXXXXXXXX+XX+XXXXXXXXXXXX __29__ >CONSENSUS__29__ Length: 1195 [gain: 40] ATGGCGTCGAGGTGACGAAGGCGTGTCAACTCCGGGAGTTGACGCTGCAAACAGTGCGGACGGTTGCAAACGTACCGCACTGACGCAATTTGCATGCTGTCGTGCAGCCGGGCTGCACGACGAAGCGCCATGCGATCAAGCCGGGCTTGATATCGCGCGCCCGCAGACAGGGTCTGCCGGCGAAGGGACACATTACCGTGCAGCCGGGCTGCACGAAGGAAAATGCGGTCAAGCCGGGCTTGATACCGCGCGCCCGCGGACAGGGTCCGCCGGCGAACGACTGTCCACGGCCGGGCCTGGACCAGAAGAACAACTGTGCGGAGCCGGGCTCCGCACAACAAGAAGACGGCGCAAGCGGAAAACGCTGCGCAAGTCTCGGTCCGGGACCGAGACGCAACAAGAGCAGTCTGCTGGGCAGACTGCGGCGGTGACGCCGAATGTCAAGACGCTAAGCGTCTTGACGCGCACCGATACTGGATTCCAGTATCGTGACATGGAACTCGCTAGTCCTCCGACGACGGCGTCGGAGTTGACTTCGCTTCCAGCCATGAGCTGGAAGCGCTTCACGCGCGACTTGCACGATGGACGCATCGAGCAAGTCTGCGTTCTTTCGGACAGCGAAAGAACGGAGAGCGAGAGCGAAGAGCTGAGGCAGCTCTTCATGGGAAGTACCACTGAGAGTGAAGACACTCTCAGTGCGAAGACGAAGCGAGAGCGCTTCGAGGAACAAGGTTGGGACTCGCTGAAGTCGAGTCCCTATTACGAATTGTTGAGGGAGTACAAAGACGTACTCCCGGAAGAGATTCCTGCGGAGCTTCCGCAGGATAAGGGCATTCAGCACGAGATTGATCTCGTGCCGGGCACGAAGTACTGTGTCACGCGGCAGTGGCCACTGCCGCGAGAGCAAGTGAAAGCGATCGACGACTTCTTTGAAAGTCGTCGTAAAGCAGGACAAGTGCGGGAATCAAAGTCCCCGCACAGTGCTCCGACGTTCTGTGTCAAGAAGCCACAGGGCGGATGGCGCATCGTTCATGCCTACAACAAGCTGAACGATGCGACGGTACCGGCGCAGACGCCGATACCGCGAAAAGATGTTATCATCGATTCGATGGCCGGGAGCACCGTTTACAGTGCTCTCGACTTGCGAGATGGATTTTATCAAATCCTAATGCGTGAGAGCGATATCCCTCTCACG OLD KEY: ACCGTTTACAGTGCTCTCGACTTGCGAGATGGATT NEW KEY: AAATCCTAATGCGTGAGAGCGATATCCCTCTCACG ........ _A_ XXX0000XX000000X0X000X0X00000000X0000X000X00X0000XX00000X000000000XX00000X0 __30__ ........ _T_ 000X00X00X000X00000000X0X000X0X00000000X00000000000000000X00X0X00000X000X00 __30__ ........ _G_ 0000000000X0X0X0X0X0X0000000000000XX00X0X0X000X0000X0XX000X0000XXX000XX000X __30__ ........ _C_ 0000XX00000X0000000X00000XXX0X0X0X00X000000X0X0XX000X00X000X0X000000000X000 __30__ ........ _N_ 000000000000000000000000000000000000000000000000000000000000000000000000000 __30__ ........ ALL OOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOwwwwwwwwwwwwwwwwwwwwwvuutssrrqqpoomj __30__ ******** *** ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^**************************************** __30__ ######## CNS AAATCCTAATGCGTGAGAGCGATATCCCTCTCACGGCAGTGAGCACGCCAAGCGGCATGCTCTGGGAATGGCTAG __30__ ######## QLT XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX __30__ >CONSENSUS__30__ Length: 1235 [gain: 40] ATGGCGTCGAGGTGACGAAGGCGTGTCAACTCCGGGAGTTGACGCTGCAAACAGTGCGGACGGTTGCAAACGTACCGCACTGACGCAATTTGCATGCTGTCGTGCAGCCGGGCTGCACGACGAAGCGCCATGCGATCAAGCCGGGCTTGATATCGCGCGCCCGCAGACAGGGTCTGCCGGCGAAGGGACACATTACCGTGCAGCCGGGCTGCACGAAGGAAAATGCGGTCAAGCCGGGCTTGATACCGCGCGCCCGCGGACAGGGTCCGCCGGCGAACGACTGTCCACGGCCGGGCCTGGACCAGAAGAACAACTGTGCGGAGCCGGGCTCCGCACAACAAGAAGACGGCGCAAGCGGAAAACGCTGCGCAAGTCTCGGTCCGGGACCGAGACGCAACAAGAGCAGTCTGCTGGGCAGACTGCGGCGGTGACGCCGAATGTCAAGACGCTAAGCGTCTTGACGCGCACCGATACTGGATTCCAGTATCGTGACATGGAACTCGCTAGTCCTCCGACGACGGCGTCGGAGTTGACTTCGCTTCCAGCCATGAGCTGGAAGCGCTTCACGCGCGACTTGCACGATGGACGCATCGAGCAAGTCTGCGTTCTTTCGGACAGCGAAAGAACGGAGAGCGAGAGCGAAGAGCTGAGGCAGCTCTTCATGGGAAGTACCACTGAGAGTGAAGACACTCTCAGTGCGAAGACGAAGCGAGAGCGCTTCGAGGAACAAGGTTGGGACTCGCTGAAGTCGAGTCCCTATTACGAATTGTTGAGGGAGTACAAAGACGTACTCCCGGAAGAGATTCCTGCGGAGCTTCCGCAGGATAAGGGCATTCAGCACGAGATTGATCTCGTGCCGGGCACGAAGTACTGTGTCACGCGGCAGTGGCCACTGCCGCGAGAGCAAGTGAAAGCGATCGACGACTTCTTTGAAAGTCGTCGTAAAGCAGGACAAGTGCGGGAATCAAAGTCCCCGCACAGTGCTCCGACGTTCTGTGTCAAGAAGCCACAGGGCGGATGGCGCATCGTTCATGCCTACAACAAGCTGAACGATGCGACGGTACCGGCGCAGACGCCGATACCGCGAAAAGATGTTATCATCGATTCGATGGCCGGGAGCACCGTTTACAGTGCTCTCGACTTGCGAGATGGATTTTATCAAATCCTAATGCGTGAGAGCGATATCCCTCTCACGGCAGTGAGCACGCCAAGCGGCATGCTCTGGGAATGGCTAG OLD KEY: AAATCCTAATGCGTGAGAGCGATATCCCTCTCACG NEW KEY: GAGCACGCCAAGCGGCATGCTCTGGGAATGGCTAG ........ _A_ 0X00X0000XX00000X000000000XX00000X009X000090X0000000XX0XX0000000000900000XX __31__ ........ _T_ 00000000000000000X00X0X00000X000X00X00X00000000000XX000005000009000008XX000 __31__ ........ _G_ X0X000X0000X0XX000X0000XXX000XX000X0100X00100XXXX000009000X00000X0X00000000 __31__ ........ _C_ 000X0X0XX000X00X000X0X000000000X00000000XX0X00000X000000050XXXX00X00X200X00 __31__ ........ _N_ 000000000000000000000000000000000000000000000000000000000000000000000000000 __31__ ........ ALL PPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPOOOOOOOOOOOOOOwwwwwwwwwwwwwwvuttsrrqqpol __31__ ******** *** ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^**************************************** __31__ ######## CNS GAGCACGCCAAGCGGCATGCTCTGGGAATGGCTAGTaATGCCaCAGGGGCTTAAgAAcGCCCCtGCGaCtTTCAA __31__ ######## QLT XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX+XXXXX+XXXXXXXXXXX+XX?XXXXX+XXX+X+XXXXX __31__ >CONSENSUS__31__ Length: 1275 [gain: 40] ATGGCGTCGAGGTGACGAAGGCGTGTCAACTCCGGGAGTTGACGCTGCAAACAGTGCGGACGGTTGCAAACGTACCGCACTGACGCAATTTGCATGCTGTCGTGCAGCCGGGCTGCACGACGAAGCGCCATGCGATCAAGCCGGGCTTGATATCGCGCGCCCGCAGACAGGGTCTGCCGGCGAAGGGACACATTACCGTGCAGCCGGGCTGCACGAAGGAAAATGCGGTCAAGCCGGGCTTGATACCGCGCGCCCGCGGACAGGGTCCGCCGGCGAACGACTGTCCACGGCCGGGCCTGGACCAGAAGAACAACTGTGCGGAGCCGGGCTCCGCACAACAAGAAGACGGCGCAAGCGGAAAACGCTGCGCAAGTCTCGGTCCGGGACCGAGACGCAACAAGAGCAGTCTGCTGGGCAGACTGCGGCGGTGACGCCGAATGTCAAGACGCTAAGCGTCTTGACGCGCACCGATACTGGATTCCAGTATCGTGACATGGAACTCGCTAGTCCTCCGACGACGGCGTCGGAGTTGACTTCGCTTCCAGCCATGAGCTGGAAGCGCTTCACGCGCGACTTGCACGATGGACGCATCGAGCAAGTCTGCGTTCTTTCGGACAGCGAAAGAACGGAGAGCGAGAGCGAAGAGCTGAGGCAGCTCTTCATGGGAAGTACCACTGAGAGTGAAGACACTCTCAGTGCGAAGACGAAGCGAGAGCGCTTCGAGGAACAAGGTTGGGACTCGCTGAAGTCGAGTCCCTATTACGAATTGTTGAGGGAGTACAAAGACGTACTCCCGGAAGAGATTCCTGCGGAGCTTCCGCAGGATAAGGGCATTCAGCACGAGATTGATCTCGTGCCGGGCACGAAGTACTGTGTCACGCGGCAGTGGCCACTGCCGCGAGAGCAAGTGAAAGCGATCGACGACTTCTTTGAAAGTCGTCGTAAAGCAGGACAAGTGCGGGAATCAAAGTCCCCGCACAGTGCTCCGACGTTCTGTGTCAAGAAGCCACAGGGCGGATGGCGCATCGTTCATGCCTACAACAAGCTGAACGATGCGACGGTACCGGCGCAGACGCCGATACCGCGAAAAGATGTTATCATCGATTCGATGGCCGGGAGCACCGTTTACAGTGCTCTCGACTTGCGAGATGGATTTTATCAAATCCTAATGCGTGAGAGCGATATCCCTCTCACGGCAGTGAGCACGCCAAGCGGCATGCTCTGGGAATGGCTAGTAATGCCACAGGGGCTTAAGAACGCCCCTGCGACTTTCAA OLD KEY: GAGCACGCCAAGCGGCATGCTCTGGGAATGGCTAG NEW KEY: CCACAGGGGCTTAAGAACGCCCCTGCGACTTTCAA ........ _A_ 00X0X0000000XX0XX0000000000X00000XX0X00000001X000X0000000000000000000090000 __32__ ........ _T_ 0000000000XX00000000000X00000XXX0000000X000X0000000XX0XX00009000900000019X0 __32__ ........ _G_ 00000XXXX00000X000X00000X0X0000000000XX0X0X0900X00000X00X0X000XX1X0X0X00000 __32__ ........ _C_ XX0X00000X0000000X0XXXX00X00X000X00X00000X0000X0X0X000000X0X1X0000X09009009 __32__ ........ _N_ 000000000000000000000000000000000000000000000000000000000000000000000000000 __32__ ........ ALL uuuuuuuuuuuuuuuuuuuuuuuuuuuuuuuuuuuuuuuttttttssssssrrrrrqqqqppppoooomlljjgd __32__ ******** *** ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^**************************************** __32__ ######## CNS CCACAGGGGCTTAAGAACGCCCCTGCGACTTTCAACAGGTGCGTgACGCACTTGTTGCGCtCGGtGCGcGactTc __32__ ######## QLT XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX+XXXXXXXXXXXXXXX+XXX+XXX+X+++X+ __32__ >CONSENSUS__32__ Length: 1315 [gain: 40] ATGGCGTCGAGGTGACGAAGGCGTGTCAACTCCGGGAGTTGACGCTGCAAACAGTGCGGACGGTTGCAAACGTACCGCACTGACGCAATTTGCATGCTGTCGTGCAGCCGGGCTGCACGACGAAGCGCCATGCGATCAAGCCGGGCTTGATATCGCGCGCCCGCAGACAGGGTCTGCCGGCGAAGGGACACATTACCGTGCAGCCGGGCTGCACGAAGGAAAATGCGGTCAAGCCGGGCTTGATACCGCGCGCCCGCGGACAGGGTCCGCCGGCGAACGACTGTCCACGGCCGGGCCTGGACCAGAAGAACAACTGTGCGGAGCCGGGCTCCGCACAACAAGAAGACGGCGCAAGCGGAAAACGCTGCGCAAGTCTCGGTCCGGGACCGAGACGCAACAAGAGCAGTCTGCTGGGCAGACTGCGGCGGTGACGCCGAATGTCAAGACGCTAAGCGTCTTGACGCGCACCGATACTGGATTCCAGTATCGTGACATGGAACTCGCTAGTCCTCCGACGACGGCGTCGGAGTTGACTTCGCTTCCAGCCATGAGCTGGAAGCGCTTCACGCGCGACTTGCACGATGGACGCATCGAGCAAGTCTGCGTTCTTTCGGACAGCGAAAGAACGGAGAGCGAGAGCGAAGAGCTGAGGCAGCTCTTCATGGGAAGTACCACTGAGAGTGAAGACACTCTCAGTGCGAAGACGAAGCGAGAGCGCTTCGAGGAACAAGGTTGGGACTCGCTGAAGTCGAGTCCCTATTACGAATTGTTGAGGGAGTACAAAGACGTACTCCCGGAAGAGATTCCTGCGGAGCTTCCGCAGGATAAGGGCATTCAGCACGAGATTGATCTCGTGCCGGGCACGAAGTACTGTGTCACGCGGCAGTGGCCACTGCCGCGAGAGCAAGTGAAAGCGATCGACGACTTCTTTGAAAGTCGTCGTAAAGCAGGACAAGTGCGGGAATCAAAGTCCCCGCACAGTGCTCCGACGTTCTGTGTCAAGAAGCCACAGGGCGGATGGCGCATCGTTCATGCCTACAACAAGCTGAACGATGCGACGGTACCGGCGCAGACGCCGATACCGCGAAAAGATGTTATCATCGATTCGATGGCCGGGAGCACCGTTTACAGTGCTCTCGACTTGCGAGATGGATTTTATCAAATCCTAATGCGTGAGAGCGATATCCCTCTCACGGCAGTGAGCACGCCAAGCGGCATGCTCTGGGAATGGCTAGTAATGCCACAGGGGCTTAAGAACGCCCCTGCGACTTTCAACAGGTGCGTGACGCACTTGTTGCGCTCGGTGCGCGACTTC OLD KEY: CCACAGGGGCTTAAGAACGCCCCTGCGACTTTCAA NEW KEY: GCGTGACGCACTTGTTGCGCTCGGTGCGCGACTTC ........ _A_ 00000X000X00000000000000000000X0000008000X000X00000X00X0006000X000X0X000120 __33__ ........ _T_ 000X0000000XX0XX0000X000X0000000XX0000000000X01XX000900X0X0XX00X00000000000 __33__ ........ _G_ X0X0X00X00000X00X0X000XX0X0X0X00000X0200X0X0000000X00X00X040000000000X0098X __33__ ........ _C_ 0X0000X0X0X000000X0X0X0000X0X00X00X0X0XX000X00900X00100000000X00XX0X00XX000 __33__ ........ _N_ 000000000000000000000000000000000000000000000000000000000000000000000000000 __33__ ........ ALL OOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOwwwwwwwwwwwwwwwwvuutssrqqpoonkhc __33__ ******** *** ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^**************************************** __33__ ######## CNS GCGTGACGCACTTGTTGCGCTCGGTGCGCGACTTCGCaCCGAGCTAcTTCGAtGATGTaTTCATCCACAGCCggG __33__ ######## QLT XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX+XXXXXXXX+XXXXX+XXXXX!XXXXXXXXXXXXX++X __33__ >CONSENSUS__33__ Length: 1355 [gain: 40] ATGGCGTCGAGGTGACGAAGGCGTGTCAACTCCGGGAGTTGACGCTGCAAACAGTGCGGACGGTTGCAAACGTACCGCACTGACGCAATTTGCATGCTGTCGTGCAGCCGGGCTGCACGACGAAGCGCCATGCGATCAAGCCGGGCTTGATATCGCGCGCCCGCAGACAGGGTCTGCCGGCGAAGGGACACATTACCGTGCAGCCGGGCTGCACGAAGGAAAATGCGGTCAAGCCGGGCTTGATACCGCGCGCCCGCGGACAGGGTCCGCCGGCGAACGACTGTCCACGGCCGGGCCTGGACCAGAAGAACAACTGTGCGGAGCCGGGCTCCGCACAACAAGAAGACGGCGCAAGCGGAAAACGCTGCGCAAGTCTCGGTCCGGGACCGAGACGCAACAAGAGCAGTCTGCTGGGCAGACTGCGGCGGTGACGCCGAATGTCAAGACGCTAAGCGTCTTGACGCGCACCGATACTGGATTCCAGTATCGTGACATGGAACTCGCTAGTCCTCCGACGACGGCGTCGGAGTTGACTTCGCTTCCAGCCATGAGCTGGAAGCGCTTCACGCGCGACTTGCACGATGGACGCATCGAGCAAGTCTGCGTTCTTTCGGACAGCGAAAGAACGGAGAGCGAGAGCGAAGAGCTGAGGCAGCTCTTCATGGGAAGTACCACTGAGAGTGAAGACACTCTCAGTGCGAAGACGAAGCGAGAGCGCTTCGAGGAACAAGGTTGGGACTCGCTGAAGTCGAGTCCCTATTACGAATTGTTGAGGGAGTACAAAGACGTACTCCCGGAAGAGATTCCTGCGGAGCTTCCGCAGGATAAGGGCATTCAGCACGAGATTGATCTCGTGCCGGGCACGAAGTACTGTGTCACGCGGCAGTGGCCACTGCCGCGAGAGCAAGTGAAAGCGATCGACGACTTCTTTGAAAGTCGTCGTAAAGCAGGACAAGTGCGGGAATCAAAGTCCCCGCACAGTGCTCCGACGTTCTGTGTCAAGAAGCCACAGGGCGGATGGCGCATCGTTCATGCCTACAACAAGCTGAACGATGCGACGGTACCGGCGCAGACGCCGATACCGCGAAAAGATGTTATCATCGATTCGATGGCCGGGAGCACCGTTTACAGTGCTCTCGACTTGCGAGATGGATTTTATCAAATCCTAATGCGTGAGAGCGATATCCCTCTCACGGCAGTGAGCACGCCAAGCGGCATGCTCTGGGAATGGCTAGTAATGCCACAGGGGCTTAAGAACGCCCCTGCGACTTTCAACAGGTGCGTGACGCACTTGTTGCGCTCGGTGCGCGACTTCGCACCGAGCTACTTCGATGATGTATTCATCCACAGCCGGG OLD KEY: GCGTGACGCACTTGTTGCGCTCGGTGCGCGACTTC NEW KEY: GAGCTACTTCGATGATGTATTCATCCACAGCCGGG ........ _A_ 0X000X00000X00X000X000X000X0X000000000000X0012XX0X000X01090X0X000X09000000X __34__ ........ _T_ 0000X00XX000X00X0X0XX00X000000000000X0X00000000000000000X10000X000000009000 __34__ ........ _G_ X0X0000000X00X00X000000000000X00XXX00X0XX00X9800X000X00900X0X00X0000XXX0X00 __34__ ........ _C_ 000X00X00X00000000000X00XX0X00XX000X000000X0000000XX00X000000000X0X100000X0 __34__ ........ _N_ 000000000000000000000000000000000000000000000000000000000000000000000000000 __34__ ........ ALL wwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwvvvvuuutttsssrrrrqqqqpppooomljhf __34__ ******** *** ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^**************************************** __34__ ######## CNS GAGCTACTTCGATGATGTATTCATCCACAGCCGGGCTGTGGACGggAAGACCGACgTaGAGATGCACaGGGtGCA __34__ ######## QLT XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX++XXXXXXXXX+X+XXXXXXXXX+XXX+XXX __34__ >CONSENSUS__34__ Length: 1395 [gain: 40] ATGGCGTCGAGGTGACGAAGGCGTGTCAACTCCGGGAGTTGACGCTGCAAACAGTGCGGACGGTTGCAAACGTACCGCACTGACGCAATTTGCATGCTGTCGTGCAGCCGGGCTGCACGACGAAGCGCCATGCGATCAAGCCGGGCTTGATATCGCGCGCCCGCAGACAGGGTCTGCCGGCGAAGGGACACATTACCGTGCAGCCGGGCTGCACGAAGGAAAATGCGGTCAAGCCGGGCTTGATACCGCGCGCCCGCGGACAGGGTCCGCCGGCGAACGACTGTCCACGGCCGGGCCTGGACCAGAAGAACAACTGTGCGGAGCCGGGCTCCGCACAACAAGAAGACGGCGCAAGCGGAAAACGCTGCGCAAGTCTCGGTCCGGGACCGAGACGCAACAAGAGCAGTCTGCTGGGCAGACTGCGGCGGTGACGCCGAATGTCAAGACGCTAAGCGTCTTGACGCGCACCGATACTGGATTCCAGTATCGTGACATGGAACTCGCTAGTCCTCCGACGACGGCGTCGGAGTTGACTTCGCTTCCAGCCATGAGCTGGAAGCGCTTCACGCGCGACTTGCACGATGGACGCATCGAGCAAGTCTGCGTTCTTTCGGACAGCGAAAGAACGGAGAGCGAGAGCGAAGAGCTGAGGCAGCTCTTCATGGGAAGTACCACTGAGAGTGAAGACACTCTCAGTGCGAAGACGAAGCGAGAGCGCTTCGAGGAACAAGGTTGGGACTCGCTGAAGTCGAGTCCCTATTACGAATTGTTGAGGGAGTACAAAGACGTACTCCCGGAAGAGATTCCTGCGGAGCTTCCGCAGGATAAGGGCATTCAGCACGAGATTGATCTCGTGCCGGGCACGAAGTACTGTGTCACGCGGCAGTGGCCACTGCCGCGAGAGCAAGTGAAAGCGATCGACGACTTCTTTGAAAGTCGTCGTAAAGCAGGACAAGTGCGGGAATCAAAGTCCCCGCACAGTGCTCCGACGTTCTGTGTCAAGAAGCCACAGGGCGGATGGCGCATCGTTCATGCCTACAACAAGCTGAACGATGCGACGGTACCGGCGCAGACGCCGATACCGCGAAAAGATGTTATCATCGATTCGATGGCCGGGAGCACCGTTTACAGTGCTCTCGACTTGCGAGATGGATTTTATCAAATCCTAATGCGTGAGAGCGATATCCCTCTCACGGCAGTGAGCACGCCAAGCGGCATGCTCTGGGAATGGCTAGTAATGCCACAGGGGCTTAAGAACGCCCCTGCGACTTTCAACAGGTGCGTGACGCACTTGTTGCGCTCGGTGCGCGACTTCGCACCGAGCTACTTCGATGATGTATTCATCCACAGCCGGGCTGTGGACGGGAAGACCGACGTAGAGATGCACAGGGTGCA OLD KEY: GAGCTACTTCGATGATGTATTCATCCACAGCCGGG NEW KEY: GACGGGAAGACCGACGTAGAGATGCACAGGGTGCA ........ _A_ 0X0000XX0X000X000X0X0X000X0X000000X00000018X000X0000X0000X0010XX920X0XX0000 __35__ ........ _T_ 0000000000000000X00000X00000000X000X0X00000000X00XX0000XX0X000000000X0000X0 __35__ ........ _G_ X00XXX00X000X00X00X0X00X0000XXX0X0000000X9009000000X0X00000X0X000800000X000 __35__ ........ _C_ 00X0000000XX00X000000000X0X000000X00X0XX00200X00X00000X00000900010X00000X0X __35__ ........ _N_ 000000000000000000000000000000000000000000000000000000000000000000000000000 __35__ ........ ALL OOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOwwwwwwwwwwwwwwwwwwvvuttsssrrqqqppomlh __35__ ******** *** ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^**************************************** __35__ ######## CNS GACGGGAAGACCGACGTAGAGATGCACAGGGTGCATCTCCGgaAgCTACTTGAGCTTATGcGAAagCATAAGCTC __35__ ######## QLT XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX++X+XXXXXXXXXXXXXXX+XXX++XXXXXXXXX __35__ >CONSENSUS__35__ Length: 1435 [gain: 40] ATGGCGTCGAGGTGACGAAGGCGTGTCAACTCCGGGAGTTGACGCTGCAAACAGTGCGGACGGTTGCAAACGTACCGCACTGACGCAATTTGCATGCTGTCGTGCAGCCGGGCTGCACGACGAAGCGCCATGCGATCAAGCCGGGCTTGATATCGCGCGCCCGCAGACAGGGTCTGCCGGCGAAGGGACACATTACCGTGCAGCCGGGCTGCACGAAGGAAAATGCGGTCAAGCCGGGCTTGATACCGCGCGCCCGCGGACAGGGTCCGCCGGCGAACGACTGTCCACGGCCGGGCCTGGACCAGAAGAACAACTGTGCGGAGCCGGGCTCCGCACAACAAGAAGACGGCGCAAGCGGAAAACGCTGCGCAAGTCTCGGTCCGGGACCGAGACGCAACAAGAGCAGTCTGCTGGGCAGACTGCGGCGGTGACGCCGAATGTCAAGACGCTAAGCGTCTTGACGCGCACCGATACTGGATTCCAGTATCGTGACATGGAACTCGCTAGTCCTCCGACGACGGCGTCGGAGTTGACTTCGCTTCCAGCCATGAGCTGGAAGCGCTTCACGCGCGACTTGCACGATGGACGCATCGAGCAAGTCTGCGTTCTTTCGGACAGCGAAAGAACGGAGAGCGAGAGCGAAGAGCTGAGGCAGCTCTTCATGGGAAGTACCACTGAGAGTGAAGACACTCTCAGTGCGAAGACGAAGCGAGAGCGCTTCGAGGAACAAGGTTGGGACTCGCTGAAGTCGAGTCCCTATTACGAATTGTTGAGGGAGTACAAAGACGTACTCCCGGAAGAGATTCCTGCGGAGCTTCCGCAGGATAAGGGCATTCAGCACGAGATTGATCTCGTGCCGGGCACGAAGTACTGTGTCACGCGGCAGTGGCCACTGCCGCGAGAGCAAGTGAAAGCGATCGACGACTTCTTTGAAAGTCGTCGTAAAGCAGGACAAGTGCGGGAATCAAAGTCCCCGCACAGTGCTCCGACGTTCTGTGTCAAGAAGCCACAGGGCGGATGGCGCATCGTTCATGCCTACAACAAGCTGAACGATGCGACGGTACCGGCGCAGACGCCGATACCGCGAAAAGATGTTATCATCGATTCGATGGCCGGGAGCACCGTTTACAGTGCTCTCGACTTGCGAGATGGATTTTATCAAATCCTAATGCGTGAGAGCGATATCCCTCTCACGGCAGTGAGCACGCCAAGCGGCATGCTCTGGGAATGGCTAGTAATGCCACAGGGGCTTAAGAACGCCCCTGCGACTTTCAACAGGTGCGTGACGCACTTGTTGCGCTCGGTGCGCGACTTCGCACCGAGCTACTTCGATGATGTATTCATCCACAGCCGGGCTGTGGACGGGAAGACCGACGTAGAGATGCACAGGGTGCATCTCCGGAAGCTACTTGAGCTTATGCGAAAGCATAAGCTC OLD KEY: GACGGGAAGACCGACGTAGAGATGCACAGGGTGCA NEW KEY: GGAAGCTACTTGAGCTTATGCGAAAGCATAAGCTC ........ _A_ 00XX000X0000X0000X0000XXX00X0XX00000X0000XX0000XX0XX0000X00000000000X000X0X __36__ ........ _T_ 000000X00XX0000XX0X000000000X0000X0X000000000X0000000X090X0XX00000000000000 __36__ ........ _G_ XX00X000000X0X00000X0X000X00000X000000X0X00000X00X00X0X0000000XXXX0X0X0X0X0 __36__ ........ _C_ 00000X00X00000X00000X00000X00000X0X00X0X000XX0000000000100X00X0000X000X0000 __36__ ........ _N_ 000000000000000000000000000000000000000000000000000000000000000000000000000 __36__ ........ ALL wwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwvvuutssrqqqpppoomkj __36__ ******** *** ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^**************************************** __36__ ######## CNS GGAAGCTACTTGAGCTTATGCGAAAGCATAAGCTCTACGCGAACCTGAAGAAGTGtATCTTCGGGGCGAGCGAGA __36__ ######## QLT XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX+XXXXXXXXXXXXXXXXXXX __36__ >CONSENSUS__36__ Length: 1475 [gain: 40] ATGGCGTCGAGGTGACGAAGGCGTGTCAACTCCGGGAGTTGACGCTGCAAACAGTGCGGACGGTTGCAAACGTACCGCACTGACGCAATTTGCATGCTGTCGTGCAGCCGGGCTGCACGACGAAGCGCCATGCGATCAAGCCGGGCTTGATATCGCGCGCCCGCAGACAGGGTCTGCCGGCGAAGGGACACATTACCGTGCAGCCGGGCTGCACGAAGGAAAATGCGGTCAAGCCGGGCTTGATACCGCGCGCCCGCGGACAGGGTCCGCCGGCGAACGACTGTCCACGGCCGGGCCTGGACCAGAAGAACAACTGTGCGGAGCCGGGCTCCGCACAACAAGAAGACGGCGCAAGCGGAAAACGCTGCGCAAGTCTCGGTCCGGGACCGAGACGCAACAAGAGCAGTCTGCTGGGCAGACTGCGGCGGTGACGCCGAATGTCAAGACGCTAAGCGTCTTGACGCGCACCGATACTGGATTCCAGTATCGTGACATGGAACTCGCTAGTCCTCCGACGACGGCGTCGGAGTTGACTTCGCTTCCAGCCATGAGCTGGAAGCGCTTCACGCGCGACTTGCACGATGGACGCATCGAGCAAGTCTGCGTTCTTTCGGACAGCGAAAGAACGGAGAGCGAGAGCGAAGAGCTGAGGCAGCTCTTCATGGGAAGTACCACTGAGAGTGAAGACACTCTCAGTGCGAAGACGAAGCGAGAGCGCTTCGAGGAACAAGGTTGGGACTCGCTGAAGTCGAGTCCCTATTACGAATTGTTGAGGGAGTACAAAGACGTACTCCCGGAAGAGATTCCTGCGGAGCTTCCGCAGGATAAGGGCATTCAGCACGAGATTGATCTCGTGCCGGGCACGAAGTACTGTGTCACGCGGCAGTGGCCACTGCCGCGAGAGCAAGTGAAAGCGATCGACGACTTCTTTGAAAGTCGTCGTAAAGCAGGACAAGTGCGGGAATCAAAGTCCCCGCACAGTGCTCCGACGTTCTGTGTCAAGAAGCCACAGGGCGGATGGCGCATCGTTCATGCCTACAACAAGCTGAACGATGCGACGGTACCGGCGCAGACGCCGATACCGCGAAAAGATGTTATCATCGATTCGATGGCCGGGAGCACCGTTTACAGTGCTCTCGACTTGCGAGATGGATTTTATCAAATCCTAATGCGTGAGAGCGATATCCCTCTCACGGCAGTGAGCACGCCAAGCGGCATGCTCTGGGAATGGCTAGTAATGCCACAGGGGCTTAAGAACGCCCCTGCGACTTTCAACAGGTGCGTGACGCACTTGTTGCGCTCGGTGCGCGACTTCGCACCGAGCTACTTCGATGATGTATTCATCCACAGCCGGGCTGTGGACGGGAAGACCGACGTAGAGATGCACAGGGTGCATCTCCGGAAGCTACTTGAGCTTATGCGAAAGCATAAGCTCTACGCGAACCTGAAGAAGTGTATCTTCGGGGCGAGCGAGA OLD KEY: GGAAGCTACTTGAGCTTATGCGAAAGCATAAGCTC NEW KEY: GAACCTGAAGAAGTGTATCTTCGGGGCGAGCGAGA ........ _A_ 0XX0000XX0XX0000X00000000000X000X0X0X000000000000000000009001XX2XX000000000 __37__ ........ _T_ 00000X0000000X0X0X0XX00000000000000X00000X00X000090X0X00X00000000090080X800 __37__ ........ _G_ X00000X00X00X0X0000000XXXX0X0X0X0X000000X00000XXX0X0000X00XX9008000XX0X000X __37__ ........ _C_ 000XX0000000000000X00X0000X000X000000XXX00XX0X000000X0X000000000000001002X0 __37__ ........ _N_ 000000000000000000000000000000000000000000000000000000000000000000000000000 __37__ ........ ALL PPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPOOOOOOOOOOOOOwwwwwwwwwwwwwuutssrqqppom __37__ ******** *** ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^**************************************** __37__ ######## CNS GAACCTGAAGAAGTGTATCTTCGGGGCGAGCGAGATACCCGTCCTCGGGtGTCTCGTaGGgAAgAAtGGtGTtCG __37__ ######## QLT XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX+XXXXXXX+XX+XX+XX+XX+XX+XX __37__ >CONSENSUS__37__ Length: 1515 [gain: 40] ATGGCGTCGAGGTGACGAAGGCGTGTCAACTCCGGGAGTTGACGCTGCAAACAGTGCGGACGGTTGCAAACGTACCGCACTGACGCAATTTGCATGCTGTCGTGCAGCCGGGCTGCACGACGAAGCGCCATGCGATCAAGCCGGGCTTGATATCGCGCGCCCGCAGACAGGGTCTGCCGGCGAAGGGACACATTACCGTGCAGCCGGGCTGCACGAAGGAAAATGCGGTCAAGCCGGGCTTGATACCGCGCGCCCGCGGACAGGGTCCGCCGGCGAACGACTGTCCACGGCCGGGCCTGGACCAGAAGAACAACTGTGCGGAGCCGGGCTCCGCACAACAAGAAGACGGCGCAAGCGGAAAACGCTGCGCAAGTCTCGGTCCGGGACCGAGACGCAACAAGAGCAGTCTGCTGGGCAGACTGCGGCGGTGACGCCGAATGTCAAGACGCTAAGCGTCTTGACGCGCACCGATACTGGATTCCAGTATCGTGACATGGAACTCGCTAGTCCTCCGACGACGGCGTCGGAGTTGACTTCGCTTCCAGCCATGAGCTGGAAGCGCTTCACGCGCGACTTGCACGATGGACGCATCGAGCAAGTCTGCGTTCTTTCGGACAGCGAAAGAACGGAGAGCGAGAGCGAAGAGCTGAGGCAGCTCTTCATGGGAAGTACCACTGAGAGTGAAGACACTCTCAGTGCGAAGACGAAGCGAGAGCGCTTCGAGGAACAAGGTTGGGACTCGCTGAAGTCGAGTCCCTATTACGAATTGTTGAGGGAGTACAAAGACGTACTCCCGGAAGAGATTCCTGCGGAGCTTCCGCAGGATAAGGGCATTCAGCACGAGATTGATCTCGTGCCGGGCACGAAGTACTGTGTCACGCGGCAGTGGCCACTGCCGCGAGAGCAAGTGAAAGCGATCGACGACTTCTTTGAAAGTCGTCGTAAAGCAGGACAAGTGCGGGAATCAAAGTCCCCGCACAGTGCTCCGACGTTCTGTGTCAAGAAGCCACAGGGCGGATGGCGCATCGTTCATGCCTACAACAAGCTGAACGATGCGACGGTACCGGCGCAGACGCCGATACCGCGAAAAGATGTTATCATCGATTCGATGGCCGGGAGCACCGTTTACAGTGCTCTCGACTTGCGAGATGGATTTTATCAAATCCTAATGCGTGAGAGCGATATCCCTCTCACGGCAGTGAGCACGCCAAGCGGCATGCTCTGGGAATGGCTAGTAATGCCACAGGGGCTTAAGAACGCCCCTGCGACTTTCAACAGGTGCGTGACGCACTTGTTGCGCTCGGTGCGCGACTTCGCACCGAGCTACTTCGATGATGTATTCATCCACAGCCGGGCTGTGGACGGGAAGACCGACGTAGAGATGCACAGGGTGCATCTCCGGAAGCTACTTGAGCTTATGCGAAAGCATAAGCTCTACGCGAACCTGAAGAAGTGTATCTTCGGGGCGAGCGAGATACCCGTCCTCGGGTGTCTCGTAGGGAAGAATGGTGTTCG OLD KEY: GAACCTGAAGAAGTGTATCTTCGGGGCGAGCGAGA NEW KEY: GTCCTCGGGTGTCTCGTAGGGAAGAATGGTGTTCG ........ _A_ 00000000000000000X000XX0XX00000000000000X00020XXXX0000X09000902XX00XX00000X __38__ ........ _T_ 0X00X0000X0X0X00X000000000X00X0XX00000X0000000000000900000900X3008000X00000 __38__ ........ _G_ X00000XXX0X0000X00XXX00X000XX0X000X0000X00008X0000XX000X190X100000X000X9000 __38__ ........ _C_ 00XX0X000000X0X000000000000000000X0XXX000XXX000000000X000000005002000000XX0 __38__ ........ _N_ 000000000000000000000000000000000000000000000000000000000000000000000000000 __38__ ........ ALL wwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwvvuuuttssssrrqqpooomkjh __38__ ******** *** ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^**************************************** __38__ ######## CNS GTCCTCGGGTGTCTCGTAGGGAAGAATGGTGTTCGCCCTGACCCgGAAAAGGtCAGagtGaTcAAtGAATGgCCA __38__ ######## QLT XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX+XXXXXXX+XXX+++X+X?XX+XXXXX+XXX __38__ >CONSENSUS__38__ Length: 1555 [gain: 40] ATGGCGTCGAGGTGACGAAGGCGTGTCAACTCCGGGAGTTGACGCTGCAAACAGTGCGGACGGTTGCAAACGTACCGCACTGACGCAATTTGCATGCTGTCGTGCAGCCGGGCTGCACGACGAAGCGCCATGCGATCAAGCCGGGCTTGATATCGCGCGCCCGCAGACAGGGTCTGCCGGCGAAGGGACACATTACCGTGCAGCCGGGCTGCACGAAGGAAAATGCGGTCAAGCCGGGCTTGATACCGCGCGCCCGCGGACAGGGTCCGCCGGCGAACGACTGTCCACGGCCGGGCCTGGACCAGAAGAACAACTGTGCGGAGCCGGGCTCCGCACAACAAGAAGACGGCGCAAGCGGAAAACGCTGCGCAAGTCTCGGTCCGGGACCGAGACGCAACAAGAGCAGTCTGCTGGGCAGACTGCGGCGGTGACGCCGAATGTCAAGACGCTAAGCGTCTTGACGCGCACCGATACTGGATTCCAGTATCGTGACATGGAACTCGCTAGTCCTCCGACGACGGCGTCGGAGTTGACTTCGCTTCCAGCCATGAGCTGGAAGCGCTTCACGCGCGACTTGCACGATGGACGCATCGAGCAAGTCTGCGTTCTTTCGGACAGCGAAAGAACGGAGAGCGAGAGCGAAGAGCTGAGGCAGCTCTTCATGGGAAGTACCACTGAGAGTGAAGACACTCTCAGTGCGAAGACGAAGCGAGAGCGCTTCGAGGAACAAGGTTGGGACTCGCTGAAGTCGAGTCCCTATTACGAATTGTTGAGGGAGTACAAAGACGTACTCCCGGAAGAGATTCCTGCGGAGCTTCCGCAGGATAAGGGCATTCAGCACGAGATTGATCTCGTGCCGGGCACGAAGTACTGTGTCACGCGGCAGTGGCCACTGCCGCGAGAGCAAGTGAAAGCGATCGACGACTTCTTTGAAAGTCGTCGTAAAGCAGGACAAGTGCGGGAATCAAAGTCCCCGCACAGTGCTCCGACGTTCTGTGTCAAGAAGCCACAGGGCGGATGGCGCATCGTTCATGCCTACAACAAGCTGAACGATGCGACGGTACCGGCGCAGACGCCGATACCGCGAAAAGATGTTATCATCGATTCGATGGCCGGGAGCACCGTTTACAGTGCTCTCGACTTGCGAGATGGATTTTATCAAATCCTAATGCGTGAGAGCGATATCCCTCTCACGGCAGTGAGCACGCCAAGCGGCATGCTCTGGGAATGGCTAGTAATGCCACAGGGGCTTAAGAACGCCCCTGCGACTTTCAACAGGTGCGTGACGCACTTGTTGCGCTCGGTGCGCGACTTCGCACCGAGCTACTTCGATGATGTATTCATCCACAGCCGGGCTGTGGACGGGAAGACCGACGTAGAGATGCACAGGGTGCATCTCCGGAAGCTACTTGAGCTTATGCGAAAGCATAAGCTCTACGCGAACCTGAAGAAGTGTATCTTCGGGGCGAGCGAGATACCCGTCCTCGGGTGTCTCGTAGGGAAGAATGGTGTTCGCCCTGACCCGGAAAAGGTCAGAGTGATCAATGAATGGCCA OLD KEY: GTCCTCGGGTGTCTCGTAGGGAAGAATGGTGTTCG NEW KEY: ACCCGGAAAAGGTCAGAGTGATCAATGAATGGCCA ........ _A_ X00000XXXX0000X0X000X00XX00XX00000XX0000000XX00000XX00XX000X000X00000000000 __39__ ........ _T_ 000000000000X00000X00X000X000X0000000000XX000090X00000000X0000000XX00XX000X __39__ ........ _G_ 0000XX0000XX000X0X0X000000X000XX00000X0000000X0X0000XX0000X0X900X000000XX00 __39__ ........ _C_ 0XXX000000000X00000000X000000000XX00X0XX00X000000X000000X00000X0000XX0000X0 __39__ ........ _N_ 000000000000000000000000000000000000000000000000000000000000000000000000000 __39__ ........ ALL vvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvuuuuuuttttsssssrrrqqqqqppppoooonnmljgfd __39__ ******** *** ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^**************************************** __39__ ######## CNS ACCCGGAAAAGGTCAGAGTGATCAATGAATGGCCAACGCCTTCAAGtGTCAAGGAACTGAGgCAGTTCCTTGGCT __39__ ######## QLT XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX+XXXXXXXXXXXXXX+XXXXXXXXXXXXX __39__ >CONSENSUS__39__ Length: 1595 [gain: 40] ATGGCGTCGAGGTGACGAAGGCGTGTCAACTCCGGGAGTTGACGCTGCAAACAGTGCGGACGGTTGCAAACGTACCGCACTGACGCAATTTGCATGCTGTCGTGCAGCCGGGCTGCACGACGAAGCGCCATGCGATCAAGCCGGGCTTGATATCGCGCGCCCGCAGACAGGGTCTGCCGGCGAAGGGACACATTACCGTGCAGCCGGGCTGCACGAAGGAAAATGCGGTCAAGCCGGGCTTGATACCGCGCGCCCGCGGACAGGGTCCGCCGGCGAACGACTGTCCACGGCCGGGCCTGGACCAGAAGAACAACTGTGCGGAGCCGGGCTCCGCACAACAAGAAGACGGCGCAAGCGGAAAACGCTGCGCAAGTCTCGGTCCGGGACCGAGACGCAACAAGAGCAGTCTGCTGGGCAGACTGCGGCGGTGACGCCGAATGTCAAGACGCTAAGCGTCTTGACGCGCACCGATACTGGATTCCAGTATCGTGACATGGAACTCGCTAGTCCTCCGACGACGGCGTCGGAGTTGACTTCGCTTCCAGCCATGAGCTGGAAGCGCTTCACGCGCGACTTGCACGATGGACGCATCGAGCAAGTCTGCGTTCTTTCGGACAGCGAAAGAACGGAGAGCGAGAGCGAAGAGCTGAGGCAGCTCTTCATGGGAAGTACCACTGAGAGTGAAGACACTCTCAGTGCGAAGACGAAGCGAGAGCGCTTCGAGGAACAAGGTTGGGACTCGCTGAAGTCGAGTCCCTATTACGAATTGTTGAGGGAGTACAAAGACGTACTCCCGGAAGAGATTCCTGCGGAGCTTCCGCAGGATAAGGGCATTCAGCACGAGATTGATCTCGTGCCGGGCACGAAGTACTGTGTCACGCGGCAGTGGCCACTGCCGCGAGAGCAAGTGAAAGCGATCGACGACTTCTTTGAAAGTCGTCGTAAAGCAGGACAAGTGCGGGAATCAAAGTCCCCGCACAGTGCTCCGACGTTCTGTGTCAAGAAGCCACAGGGCGGATGGCGCATCGTTCATGCCTACAACAAGCTGAACGATGCGACGGTACCGGCGCAGACGCCGATACCGCGAAAAGATGTTATCATCGATTCGATGGCCGGGAGCACCGTTTACAGTGCTCTCGACTTGCGAGATGGATTTTATCAAATCCTAATGCGTGAGAGCGATATCCCTCTCACGGCAGTGAGCACGCCAAGCGGCATGCTCTGGGAATGGCTAGTAATGCCACAGGGGCTTAAGAACGCCCCTGCGACTTTCAACAGGTGCGTGACGCACTTGTTGCGCTCGGTGCGCGACTTCGCACCGAGCTACTTCGATGATGTATTCATCCACAGCCGGGCTGTGGACGGGAAGACCGACGTAGAGATGCACAGGGTGCATCTCCGGAAGCTACTTGAGCTTATGCGAAAGCATAAGCTCTACGCGAACCTGAAGAAGTGTATCTTCGGGGCGAGCGAGATACCCGTCCTCGGGTGTCTCGTAGGGAAGAATGGTGTTCGCCCTGACCCGGAAAAGGTCAGAGTGATCAATGAATGGCCAACGCCTTCAAGTGTCAAGGAACTGAGGCAGTTCCTTGGCT OLD KEY: ACCCGGAAAAGGTCAGAGTGATCAATGAATGGCCA NEW KEY: TTCAAGTGTCAAGGAACTGAGGCAGTTCCTTGGCT ........ _A_ 000XX00000XX00XX000X000X0000000000000000X000X0000000XX00X00000X00X00X000000 __40__ ........ _T_ XX0000X0X00000000X0000000XX00XX000XX0000000X00XX0X00000X000X0000007X0600000 __40__ ........ _G_ 00000X0X0000XX0000X0XX00X000000XX000XX0000X00000X0X000X000X0XX0XX00000X0XXX __40__ ........ _C_ 00X000000X000000X00000X0000XX0000X0000XX0X000X00000X00000X0000000030030X000 __40__ ........ _N_ 000000000000000000000000000000000000000000000000000000000000000000000000000 __40__ ........ ALL PPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPOOOOOOOOOOOOOwwwwwwwwwwwwwvutttrqpoonl __40__ ******** *** ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^**************************************** __40__ ######## CNS TTCAAGTGTCAAGGAACTGAGGCAGTTCCTTGGCTTGGCCACGTACTTGTGCAAGTACGTGGAGGAtTAtGCGGG __40__ ######## QLT XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX@XX!XXXXX __40__ >CONSENSUS__40__ Length: 1635 [gain: 40] ATGGCGTCGAGGTGACGAAGGCGTGTCAACTCCGGGAGTTGACGCTGCAAACAGTGCGGACGGTTGCAAACGTACCGCACTGACGCAATTTGCATGCTGTCGTGCAGCCGGGCTGCACGACGAAGCGCCATGCGATCAAGCCGGGCTTGATATCGCGCGCCCGCAGACAGGGTCTGCCGGCGAAGGGACACATTACCGTGCAGCCGGGCTGCACGAAGGAAAATGCGGTCAAGCCGGGCTTGATACCGCGCGCCCGCGGACAGGGTCCGCCGGCGAACGACTGTCCACGGCCGGGCCTGGACCAGAAGAACAACTGTGCGGAGCCGGGCTCCGCACAACAAGAAGACGGCGCAAGCGGAAAACGCTGCGCAAGTCTCGGTCCGGGACCGAGACGCAACAAGAGCAGTCTGCTGGGCAGACTGCGGCGGTGACGCCGAATGTCAAGACGCTAAGCGTCTTGACGCGCACCGATACTGGATTCCAGTATCGTGACATGGAACTCGCTAGTCCTCCGACGACGGCGTCGGAGTTGACTTCGCTTCCAGCCATGAGCTGGAAGCGCTTCACGCGCGACTTGCACGATGGACGCATCGAGCAAGTCTGCGTTCTTTCGGACAGCGAAAGAACGGAGAGCGAGAGCGAAGAGCTGAGGCAGCTCTTCATGGGAAGTACCACTGAGAGTGAAGACACTCTCAGTGCGAAGACGAAGCGAGAGCGCTTCGAGGAACAAGGTTGGGACTCGCTGAAGTCGAGTCCCTATTACGAATTGTTGAGGGAGTACAAAGACGTACTCCCGGAAGAGATTCCTGCGGAGCTTCCGCAGGATAAGGGCATTCAGCACGAGATTGATCTCGTGCCGGGCACGAAGTACTGTGTCACGCGGCAGTGGCCACTGCCGCGAGAGCAAGTGAAAGCGATCGACGACTTCTTTGAAAGTCGTCGTAAAGCAGGACAAGTGCGGGAATCAAAGTCCCCGCACAGTGCTCCGACGTTCTGTGTCAAGAAGCCACAGGGCGGATGGCGCATCGTTCATGCCTACAACAAGCTGAACGATGCGACGGTACCGGCGCAGACGCCGATACCGCGAAAAGATGTTATCATCGATTCGATGGCCGGGAGCACCGTTTACAGTGCTCTCGACTTGCGAGATGGATTTTATCAAATCCTAATGCGTGAGAGCGATATCCCTCTCACGGCAGTGAGCACGCCAAGCGGCATGCTCTGGGAATGGCTAGTAATGCCACAGGGGCTTAAGAACGCCCCTGCGACTTTCAACAGGTGCGTGACGCACTTGTTGCGCTCGGTGCGCGACTTCGCACCGAGCTACTTCGATGATGTATTCATCCACAGCCGGGCTGTGGACGGGAAGACCGACGTAGAGATGCACAGGGTGCATCTCCGGAAGCTACTTGAGCTTATGCGAAAGCATAAGCTCTACGCGAACCTGAAGAAGTGTATCTTCGGGGCGAGCGAGATACCCGTCCTCGGGTGTCTCGTAGGGAAGAATGGTGTTCGCCCTGACCCGGAAAAGGTCAGAGTGATCAATGAATGGCCAACGCCTTCAAGTGTCAAGGAACTGAGGCAGTTCCTTGGCTTGGCCACGTACTTGTGCAAGTACGTGGAGGATTATGCGGG OLD KEY: TTCAAGTGTCAAGGAACTGAGGCAGTTCCTTGGCT NEW KEY: ACGTACTTGTGCAAGTACGTGGAGGATTATGCGGG ........ _A_ X000X0000000XX00X00000X00X00X0000000XX0X0000000000100X0X3000000XX0XX809X000 __41__ ........ _T_ 000X00XX0X00000X000X000000XX0X0000000000X00000000X0X000000XX0X900000000000X __41__ ........ _G_ 00X00000X0X000X000X0XX0XX00000X0XXX000X0000X000X00900000700000000X002900X00 __41__ ........ _C_ 0X000X00000X00000X0000000000000X000X00000XX0XXX0X000X0X00X00X000000000000X0 __41__ ........ _N_ 000000000000000000000000000000000000000000000000000000000000000000000000000 __41__ ........ ALL wwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwvvvvvuuuuttttsssssrrrqqqqppppooonnmkjged __41__ ******** *** ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^**************************************** __41__ ######## CNS ACGTACTTGTGCAAGTACGTGGAGGATTATGCGGGCAAGATCCGCCCGCTgTCACAgCTTCTtAAGAAagaAGCT __41__ ######## QLT XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX+XXXXX@XXXXX+XXXXX+++XXXX __41__ >CONSENSUS__41__ Length: 1675 [gain: 40] ATGGCGTCGAGGTGACGAAGGCGTGTCAACTCCGGGAGTTGACGCTGCAAACAGTGCGGACGGTTGCAAACGTACCGCACTGACGCAATTTGCATGCTGTCGTGCAGCCGGGCTGCACGACGAAGCGCCATGCGATCAAGCCGGGCTTGATATCGCGCGCCCGCAGACAGGGTCTGCCGGCGAAGGGACACATTACCGTGCAGCCGGGCTGCACGAAGGAAAATGCGGTCAAGCCGGGCTTGATACCGCGCGCCCGCGGACAGGGTCCGCCGGCGAACGACTGTCCACGGCCGGGCCTGGACCAGAAGAACAACTGTGCGGAGCCGGGCTCCGCACAACAAGAAGACGGCGCAAGCGGAAAACGCTGCGCAAGTCTCGGTCCGGGACCGAGACGCAACAAGAGCAGTCTGCTGGGCAGACTGCGGCGGTGACGCCGAATGTCAAGACGCTAAGCGTCTTGACGCGCACCGATACTGGATTCCAGTATCGTGACATGGAACTCGCTAGTCCTCCGACGACGGCGTCGGAGTTGACTTCGCTTCCAGCCATGAGCTGGAAGCGCTTCACGCGCGACTTGCACGATGGACGCATCGAGCAAGTCTGCGTTCTTTCGGACAGCGAAAGAACGGAGAGCGAGAGCGAAGAGCTGAGGCAGCTCTTCATGGGAAGTACCACTGAGAGTGAAGACACTCTCAGTGCGAAGACGAAGCGAGAGCGCTTCGAGGAACAAGGTTGGGACTCGCTGAAGTCGAGTCCCTATTACGAATTGTTGAGGGAGTACAAAGACGTACTCCCGGAAGAGATTCCTGCGGAGCTTCCGCAGGATAAGGGCATTCAGCACGAGATTGATCTCGTGCCGGGCACGAAGTACTGTGTCACGCGGCAGTGGCCACTGCCGCGAGAGCAAGTGAAAGCGATCGACGACTTCTTTGAAAGTCGTCGTAAAGCAGGACAAGTGCGGGAATCAAAGTCCCCGCACAGTGCTCCGACGTTCTGTGTCAAGAAGCCACAGGGCGGATGGCGCATCGTTCATGCCTACAACAAGCTGAACGATGCGACGGTACCGGCGCAGACGCCGATACCGCGAAAAGATGTTATCATCGATTCGATGGCCGGGAGCACCGTTTACAGTGCTCTCGACTTGCGAGATGGATTTTATCAAATCCTAATGCGTGAGAGCGATATCCCTCTCACGGCAGTGAGCACGCCAAGCGGCATGCTCTGGGAATGGCTAGTAATGCCACAGGGGCTTAAGAACGCCCCTGCGACTTTCAACAGGTGCGTGACGCACTTGTTGCGCTCGGTGCGCGACTTCGCACCGAGCTACTTCGATGATGTATTCATCCACAGCCGGGCTGTGGACGGGAAGACCGACGTAGAGATGCACAGGGTGCATCTCCGGAAGCTACTTGAGCTTATGCGAAAGCATAAGCTCTACGCGAACCTGAAGAAGTGTATCTTCGGGGCGAGCGAGATACCCGTCCTCGGGTGTCTCGTAGGGAAGAATGGTGTTCGCCCTGACCCGGAAAAGGTCAGAGTGATCAATGAATGGCCAACGCCTTCAAGTGTCAAGGAACTGAGGCAGTTCCTTGGCTTGGCCACGTACTTGTGCAAGTACGTGGAGGATTATGCGGGCAAGATCCGCCCGCTGTCACAGCTTCTTAAGAAAGAAGCT OLD KEY: ACGTACTTGTGCAAGTACGTGGAGGATTATGCGGG NEW KEY: TCCGCCCGCTGTCACAGCTTCTTAAGAAAGAAGCT ........ _A_ 0000000000000X0X0000000XX0XXX0XX000000000XX0000X1X1000X00000XXXX000X0000X03 __42__ ........ _T_ X00000000X0X000000XX0XX00000000000X0X0X00009X0000000000XX00000000000XX000X0 __42__ ........ _G_ 000X000X00X00000X00000000X000X00X00X0X0XX0000XX000000X000X000000XX00000X007 __42__ ........ _C_ 0XX0XXX0X000X0X00X00X000000000000X00000000000000909XX00000XX000000X000X0000 __42__ ........ _N_ 000000000000000000000000000000000000000000000000000000000000000000000000000 __42__ ........ ALL wwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwvvuutttssrrrrqqqppnli __42__ ******** *** ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^**************************************** __42__ ######## CNS TCCGCCCGCTGTCACAGCTTCTTAAGAAAGAAGCTGTGTGGAAtTGGAcAcCCGATTGCCAAAAGGCATTCGATg __42__ ######## QLT XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX+XXXX+X+XXXXXXXXXXXXXXXXXXXXXXX@ __42__ >CONSENSUS__42__ Length: 1715 [gain: 40] ATGGCGTCGAGGTGACGAAGGCGTGTCAACTCCGGGAGTTGACGCTGCAAACAGTGCGGACGGTTGCAAACGTACCGCACTGACGCAATTTGCATGCTGTCGTGCAGCCGGGCTGCACGACGAAGCGCCATGCGATCAAGCCGGGCTTGATATCGCGCGCCCGCAGACAGGGTCTGCCGGCGAAGGGACACATTACCGTGCAGCCGGGCTGCACGAAGGAAAATGCGGTCAAGCCGGGCTTGATACCGCGCGCCCGCGGACAGGGTCCGCCGGCGAACGACTGTCCACGGCCGGGCCTGGACCAGAAGAACAACTGTGCGGAGCCGGGCTCCGCACAACAAGAAGACGGCGCAAGCGGAAAACGCTGCGCAAGTCTCGGTCCGGGACCGAGACGCAACAAGAGCAGTCTGCTGGGCAGACTGCGGCGGTGACGCCGAATGTCAAGACGCTAAGCGTCTTGACGCGCACCGATACTGGATTCCAGTATCGTGACATGGAACTCGCTAGTCCTCCGACGACGGCGTCGGAGTTGACTTCGCTTCCAGCCATGAGCTGGAAGCGCTTCACGCGCGACTTGCACGATGGACGCATCGAGCAAGTCTGCGTTCTTTCGGACAGCGAAAGAACGGAGAGCGAGAGCGAAGAGCTGAGGCAGCTCTTCATGGGAAGTACCACTGAGAGTGAAGACACTCTCAGTGCGAAGACGAAGCGAGAGCGCTTCGAGGAACAAGGTTGGGACTCGCTGAAGTCGAGTCCCTATTACGAATTGTTGAGGGAGTACAAAGACGTACTCCCGGAAGAGATTCCTGCGGAGCTTCCGCAGGATAAGGGCATTCAGCACGAGATTGATCTCGTGCCGGGCACGAAGTACTGTGTCACGCGGCAGTGGCCACTGCCGCGAGAGCAAGTGAAAGCGATCGACGACTTCTTTGAAAGTCGTCGTAAAGCAGGACAAGTGCGGGAATCAAAGTCCCCGCACAGTGCTCCGACGTTCTGTGTCAAGAAGCCACAGGGCGGATGGCGCATCGTTCATGCCTACAACAAGCTGAACGATGCGACGGTACCGGCGCAGACGCCGATACCGCGAAAAGATGTTATCATCGATTCGATGGCCGGGAGCACCGTTTACAGTGCTCTCGACTTGCGAGATGGATTTTATCAAATCCTAATGCGTGAGAGCGATATCCCTCTCACGGCAGTGAGCACGCCAAGCGGCATGCTCTGGGAATGGCTAGTAATGCCACAGGGGCTTAAGAACGCCCCTGCGACTTTCAACAGGTGCGTGACGCACTTGTTGCGCTCGGTGCGCGACTTCGCACCGAGCTACTTCGATGATGTATTCATCCACAGCCGGGCTGTGGACGGGAAGACCGACGTAGAGATGCACAGGGTGCATCTCCGGAAGCTACTTGAGCTTATGCGAAAGCATAAGCTCTACGCGAACCTGAAGAAGTGTATCTTCGGGGCGAGCGAGATACCCGTCCTCGGGTGTCTCGTAGGGAAGAATGGTGTTCGCCCTGACCCGGAAAAGGTCAGAGTGATCAATGAATGGCCAACGCCTTCAAGTGTCAAGGAACTGAGGCAGTTCCTTGGCTTGGCCACGTACTTGTGCAAGTACGTGGAGGATTATGCGGGCAAGATCCGCCCGCTGTCACAGCTTCTTAAGAAAGAAGCTGTGTGGAATTGGACACCCGATTGCCAAAAGGCATTCGATG OLD KEY: TCCGCCCGCTGTCACAGCTTCTTAAGAAAGAAGCT NEW KEY: GAATTGGACACCCGATTGCCAAAAGGCATTCGATG ........ _A_ 0XX0000X0X0000X00000XXXX000X0000X000X000XX0000000000X000X000200090000000901 __43__ ........ _T_ 000XX0000000000XX00000000000XX000X0000X0000000000XX000X0000000000909X000007 __43__ ........ _G_ X0000XX000000X000X000000XX00000X00X00X0000X0XXXX000X000X0XX0800910000X901X2 __43__ ........ _C_ 00000000X0XXX00000XX000000X000X0000X000X000X0000X0000X00000X0XX000X10009000 __43__ ........ _N_ 000000000000000000000000000000000000000000000000000000000000000000000000000 __43__ ........ ALL wwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwvvuutttssrrrqqppppoomlhe __43__ ******** *** ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^**************************************** __43__ ######## CNS GAATTGGACACCCGATTGCCAAAAGGCATTCGATGCAGTCAAGCGGGGCTTGACTGAGGCgCCgatCtTGgcaGt __43__ ######## QLT XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX+XX+++X+XX+++X@ __43__ >CONSENSUS__43__ Length: 1755 [gain: 40] ATGGCGTCGAGGTGACGAAGGCGTGTCAACTCCGGGAGTTGACGCTGCAAACAGTGCGGACGGTTGCAAACGTACCGCACTGACGCAATTTGCATGCTGTCGTGCAGCCGGGCTGCACGACGAAGCGCCATGCGATCAAGCCGGGCTTGATATCGCGCGCCCGCAGACAGGGTCTGCCGGCGAAGGGACACATTACCGTGCAGCCGGGCTGCACGAAGGAAAATGCGGTCAAGCCGGGCTTGATACCGCGCGCCCGCGGACAGGGTCCGCCGGCGAACGACTGTCCACGGCCGGGCCTGGACCAGAAGAACAACTGTGCGGAGCCGGGCTCCGCACAACAAGAAGACGGCGCAAGCGGAAAACGCTGCGCAAGTCTCGGTCCGGGACCGAGACGCAACAAGAGCAGTCTGCTGGGCAGACTGCGGCGGTGACGCCGAATGTCAAGACGCTAAGCGTCTTGACGCGCACCGATACTGGATTCCAGTATCGTGACATGGAACTCGCTAGTCCTCCGACGACGGCGTCGGAGTTGACTTCGCTTCCAGCCATGAGCTGGAAGCGCTTCACGCGCGACTTGCACGATGGACGCATCGAGCAAGTCTGCGTTCTTTCGGACAGCGAAAGAACGGAGAGCGAGAGCGAAGAGCTGAGGCAGCTCTTCATGGGAAGTACCACTGAGAGTGAAGACACTCTCAGTGCGAAGACGAAGCGAGAGCGCTTCGAGGAACAAGGTTGGGACTCGCTGAAGTCGAGTCCCTATTACGAATTGTTGAGGGAGTACAAAGACGTACTCCCGGAAGAGATTCCTGCGGAGCTTCCGCAGGATAAGGGCATTCAGCACGAGATTGATCTCGTGCCGGGCACGAAGTACTGTGTCACGCGGCAGTGGCCACTGCCGCGAGAGCAAGTGAAAGCGATCGACGACTTCTTTGAAAGTCGTCGTAAAGCAGGACAAGTGCGGGAATCAAAGTCCCCGCACAGTGCTCCGACGTTCTGTGTCAAGAAGCCACAGGGCGGATGGCGCATCGTTCATGCCTACAACAAGCTGAACGATGCGACGGTACCGGCGCAGACGCCGATACCGCGAAAAGATGTTATCATCGATTCGATGGCCGGGAGCACCGTTTACAGTGCTCTCGACTTGCGAGATGGATTTTATCAAATCCTAATGCGTGAGAGCGATATCCCTCTCACGGCAGTGAGCACGCCAAGCGGCATGCTCTGGGAATGGCTAGTAATGCCACAGGGGCTTAAGAACGCCCCTGCGACTTTCAACAGGTGCGTGACGCACTTGTTGCGCTCGGTGCGCGACTTCGCACCGAGCTACTTCGATGATGTATTCATCCACAGCCGGGCTGTGGACGGGAAGACCGACGTAGAGATGCACAGGGTGCATCTCCGGAAGCTACTTGAGCTTATGCGAAAGCATAAGCTCTACGCGAACCTGAAGAAGTGTATCTTCGGGGCGAGCGAGATACCCGTCCTCGGGTGTCTCGTAGGGAAGAATGGTGTTCGCCCTGACCCGGAAAAGGTCAGAGTGATCAATGAATGGCCAACGCCTTCAAGTGTCAAGGAACTGAGGCAGTTCCTTGGCTTGGCCACGTACTTGTGCAAGTACGTGGAGGATTATGCGGGCAAGATCCGCCCGCTGTCACAGCTTCTTAAGAAAGAAGCTGTGTGGAATTGGACACCCGATTGCCAAAAGGCATTCGATGCAGTCAAGCGGGGCTTGACTGAGGCGCCGATCTTGGCAGT OLD KEY: GAATTGGACACCCGATTGCCAAAAGGCATTCGATG NEW KEY: AAGCGGGGCTTGACTGAGGCGCCGATCTTGGCAGT ........ _A_ XX0000000000X000X0000000X0000000X0000000900XX0X0000009000090008001000090009 __44__ ........ _T_ 000000000XX000X0000000000X0XX00000X000X000000009001000XX9000090090909000000 __44__ ........ _G_ 00X0XXXX000X000X0XX0X00X00000XX00X0XX00X10000X000X0000000000X10X181X0X10X00 __44__ ........ _C_ 000X0000X0000X00000X0XX000X0000X00000X000XX00000X08XX1001X0X00100000100X0X1 __44__ ........ _N_ 000000000000000000000000000000000000000000000000000000000000000000000000000 __44__ ........ ALL wwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwvvuutttssrrqqppoolk __44__ ******** *** ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^**************************************** __44__ ######## CNS AAGCGGGGCTTGACTGAGGCGCCGATCTTGGCAGTGGCTGaCCAAGAtCGcCCaTTtCaCGtaGtgtGtGaCGCa __44__ ######## QLT XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX+XXXXXX+XX+XX+XX+X+XX++X+++X+X+XXX+ __44__ >CONSENSUS__44__ Length: 1795 [gain: 40] ATGGCGTCGAGGTGACGAAGGCGTGTCAACTCCGGGAGTTGACGCTGCAAACAGTGCGGACGGTTGCAAACGTACCGCACTGACGCAATTTGCATGCTGTCGTGCAGCCGGGCTGCACGACGAAGCGCCATGCGATCAAGCCGGGCTTGATATCGCGCGCCCGCAGACAGGGTCTGCCGGCGAAGGGACACATTACCGTGCAGCCGGGCTGCACGAAGGAAAATGCGGTCAAGCCGGGCTTGATACCGCGCGCCCGCGGACAGGGTCCGCCGGCGAACGACTGTCCACGGCCGGGCCTGGACCAGAAGAACAACTGTGCGGAGCCGGGCTCCGCACAACAAGAAGACGGCGCAAGCGGAAAACGCTGCGCAAGTCTCGGTCCGGGACCGAGACGCAACAAGAGCAGTCTGCTGGGCAGACTGCGGCGGTGACGCCGAATGTCAAGACGCTAAGCGTCTTGACGCGCACCGATACTGGATTCCAGTATCGTGACATGGAACTCGCTAGTCCTCCGACGACGGCGTCGGAGTTGACTTCGCTTCCAGCCATGAGCTGGAAGCGCTTCACGCGCGACTTGCACGATGGACGCATCGAGCAAGTCTGCGTTCTTTCGGACAGCGAAAGAACGGAGAGCGAGAGCGAAGAGCTGAGGCAGCTCTTCATGGGAAGTACCACTGAGAGTGAAGACACTCTCAGTGCGAAGACGAAGCGAGAGCGCTTCGAGGAACAAGGTTGGGACTCGCTGAAGTCGAGTCCCTATTACGAATTGTTGAGGGAGTACAAAGACGTACTCCCGGAAGAGATTCCTGCGGAGCTTCCGCAGGATAAGGGCATTCAGCACGAGATTGATCTCGTGCCGGGCACGAAGTACTGTGTCACGCGGCAGTGGCCACTGCCGCGAGAGCAAGTGAAAGCGATCGACGACTTCTTTGAAAGTCGTCGTAAAGCAGGACAAGTGCGGGAATCAAAGTCCCCGCACAGTGCTCCGACGTTCTGTGTCAAGAAGCCACAGGGCGGATGGCGCATCGTTCATGCCTACAACAAGCTGAACGATGCGACGGTACCGGCGCAGACGCCGATACCGCGAAAAGATGTTATCATCGATTCGATGGCCGGGAGCACCGTTTACAGTGCTCTCGACTTGCGAGATGGATTTTATCAAATCCTAATGCGTGAGAGCGATATCCCTCTCACGGCAGTGAGCACGCCAAGCGGCATGCTCTGGGAATGGCTAGTAATGCCACAGGGGCTTAAGAACGCCCCTGCGACTTTCAACAGGTGCGTGACGCACTTGTTGCGCTCGGTGCGCGACTTCGCACCGAGCTACTTCGATGATGTATTCATCCACAGCCGGGCTGTGGACGGGAAGACCGACGTAGAGATGCACAGGGTGCATCTCCGGAAGCTACTTGAGCTTATGCGAAAGCATAAGCTCTACGCGAACCTGAAGAAGTGTATCTTCGGGGCGAGCGAGATACCCGTCCTCGGGTGTCTCGTAGGGAAGAATGGTGTTCGCCCTGACCCGGAAAAGGTCAGAGTGATCAATGAATGGCCAACGCCTTCAAGTGTCAAGGAACTGAGGCAGTTCCTTGGCTTGGCCACGTACTTGTGCAAGTACGTGGAGGATTATGCGGGCAAGATCCGCCCGCTGTCACAGCTTCTTAAGAAAGAAGCTGTGTGGAATTGGACACCCGATTGCCAAAAGGCATTCGATGCAGTCAAGCGGGGCTTGACTGAGGCGCCGATCTTGGCAGTGGCTGACCAAGATCGCCCATTTCACGTAGTGTGTGACGCA OLD KEY: AAGCGGGGCTTGACTGAGGCGCCGATCTTGGCAGT NEW KEY: ACCAAGATCGCCCATTTCACGTAGTGTGTGACGCA ........ _A_ X00XX0X000000X0000X000X0000000X000X0000X0000000X0000X000001004X000X00X00X00 __45__ ........ _T_ 0000000X000000XXX0000X00X0X0X000000X00009XX00000X0000X010009X00X00000000090 __45__ ........ _G_ 00000X000X0000000000X00X0X0X0X00X00000X00000X0X000XX00X0X0900600X00X000X000 __45__ ........ _C_ 0XX00000X0XXX0000X0X00000000000X0X00XX00100X0X000X0000090X0000000X00X0X000X __45__ ........ _N_ 000000000000000000000000000000000000000000000000000000000000000000000000000 __45__ ........ ALL wwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwvvuuutttssrrqpppooonmli __45__ ******** *** ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^**************************************** __45__ ######## CNS ACCAAGATCGCCCATTTCACGTAGTGTGTGACGCATCCGAtTTCGCGATCGGATGcGCgtTgATGCAGCACGAtC __45__ ######## QLT XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX+XXXXXXXXXXXXXX+XX++X!XXXXXXXXXXX+X __45__ >CONSENSUS__45__ Length: 1835 [gain: 40] ATGGCGTCGAGGTGACGAAGGCGTGTCAACTCCGGGAGTTGACGCTGCAAACAGTGCGGACGGTTGCAAACGTACCGCACTGACGCAATTTGCATGCTGTCGTGCAGCCGGGCTGCACGACGAAGCGCCATGCGATCAAGCCGGGCTTGATATCGCGCGCCCGCAGACAGGGTCTGCCGGCGAAGGGACACATTACCGTGCAGCCGGGCTGCACGAAGGAAAATGCGGTCAAGCCGGGCTTGATACCGCGCGCCCGCGGACAGGGTCCGCCGGCGAACGACTGTCCACGGCCGGGCCTGGACCAGAAGAACAACTGTGCGGAGCCGGGCTCCGCACAACAAGAAGACGGCGCAAGCGGAAAACGCTGCGCAAGTCTCGGTCCGGGACCGAGACGCAACAAGAGCAGTCTGCTGGGCAGACTGCGGCGGTGACGCCGAATGTCAAGACGCTAAGCGTCTTGACGCGCACCGATACTGGATTCCAGTATCGTGACATGGAACTCGCTAGTCCTCCGACGACGGCGTCGGAGTTGACTTCGCTTCCAGCCATGAGCTGGAAGCGCTTCACGCGCGACTTGCACGATGGACGCATCGAGCAAGTCTGCGTTCTTTCGGACAGCGAAAGAACGGAGAGCGAGAGCGAAGAGCTGAGGCAGCTCTTCATGGGAAGTACCACTGAGAGTGAAGACACTCTCAGTGCGAAGACGAAGCGAGAGCGCTTCGAGGAACAAGGTTGGGACTCGCTGAAGTCGAGTCCCTATTACGAATTGTTGAGGGAGTACAAAGACGTACTCCCGGAAGAGATTCCTGCGGAGCTTCCGCAGGATAAGGGCATTCAGCACGAGATTGATCTCGTGCCGGGCACGAAGTACTGTGTCACGCGGCAGTGGCCACTGCCGCGAGAGCAAGTGAAAGCGATCGACGACTTCTTTGAAAGTCGTCGTAAAGCAGGACAAGTGCGGGAATCAAAGTCCCCGCACAGTGCTCCGACGTTCTGTGTCAAGAAGCCACAGGGCGGATGGCGCATCGTTCATGCCTACAACAAGCTGAACGATGCGACGGTACCGGCGCAGACGCCGATACCGCGAAAAGATGTTATCATCGATTCGATGGCCGGGAGCACCGTTTACAGTGCTCTCGACTTGCGAGATGGATTTTATCAAATCCTAATGCGTGAGAGCGATATCCCTCTCACGGCAGTGAGCACGCCAAGCGGCATGCTCTGGGAATGGCTAGTAATGCCACAGGGGCTTAAGAACGCCCCTGCGACTTTCAACAGGTGCGTGACGCACTTGTTGCGCTCGGTGCGCGACTTCGCACCGAGCTACTTCGATGATGTATTCATCCACAGCCGGGCTGTGGACGGGAAGACCGACGTAGAGATGCACAGGGTGCATCTCCGGAAGCTACTTGAGCTTATGCGAAAGCATAAGCTCTACGCGAACCTGAAGAAGTGTATCTTCGGGGCGAGCGAGATACCCGTCCTCGGGTGTCTCGTAGGGAAGAATGGTGTTCGCCCTGACCCGGAAAAGGTCAGAGTGATCAATGAATGGCCAACGCCTTCAAGTGTCAAGGAACTGAGGCAGTTCCTTGGCTTGGCCACGTACTTGTGCAAGTACGTGGAGGATTATGCGGGCAAGATCCGCCCGCTGTCACAGCTTCTTAAGAAAGAAGCTGTGTGGAATTGGACACCCGATTGCCAAAAGGCATTCGATGCAGTCAAGCGGGGCTTGACTGAGGCGCCGATCTTGGCAGTGGCTGACCAAGATCGCCCATTTCACGTAGTGTGTGACGCATCCGATTTCGCGATCGGATGCGCGTTGATGCAGCACGATC OLD KEY: ACCAAGATCGCCCATTTCACGTAGTGTGTGACGCA NEW KEY: TTTCGCGATCGGATGCGCGTTGATGCAGCACGATC ........ _A_ 0000000X0000X000000000X000X00X00X00X00X00000000X00000000000X00X00X90000000X __46__ ........ _T_ XXX00000X0000X00000XX00X000000000X00000000000900X00X0X00X0X01X00000X0000900 __46__ ........ _G_ 0000X0X000XX00X0X0X00X00X00X000X00000X0XXX00X0X000X0X00X0000000000100X0X000 __46__ ........ _C_ 000X0X000X00000X0X0000000X00X0X000X0X00000XX00000X0000X00X00900XX000X0X00X0 __46__ ........ _N_ 000000000000000000000000000000000000000000000000000000000000000000000000000 __46__ ........ ALL wwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwvvvuuuutttttsssrrrrrqqqqppppoooooomkkjie __46__ ******** *** ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^**************************************** __46__ ######## CNS TTTCGCGATCGGATGCGCGTTGATGCAGCACGATCACGAGGGCCGtGATCGTGTCGTCTAcTACCAaTCGCGtCA __46__ ######## QLT XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX+XXXXXXXXXXXXXX+XXXXX+XXXXX+XX __46__ >CONSENSUS__46__ Length: 1875 [gain: 40] ATGGCGTCGAGGTGACGAAGGCGTGTCAACTCCGGGAGTTGACGCTGCAAACAGTGCGGACGGTTGCAAACGTACCGCACTGACGCAATTTGCATGCTGTCGTGCAGCCGGGCTGCACGACGAAGCGCCATGCGATCAAGCCGGGCTTGATATCGCGCGCCCGCAGACAGGGTCTGCCGGCGAAGGGACACATTACCGTGCAGCCGGGCTGCACGAAGGAAAATGCGGTCAAGCCGGGCTTGATACCGCGCGCCCGCGGACAGGGTCCGCCGGCGAACGACTGTCCACGGCCGGGCCTGGACCAGAAGAACAACTGTGCGGAGCCGGGCTCCGCACAACAAGAAGACGGCGCAAGCGGAAAACGCTGCGCAAGTCTCGGTCCGGGACCGAGACGCAACAAGAGCAGTCTGCTGGGCAGACTGCGGCGGTGACGCCGAATGTCAAGACGCTAAGCGTCTTGACGCGCACCGATACTGGATTCCAGTATCGTGACATGGAACTCGCTAGTCCTCCGACGACGGCGTCGGAGTTGACTTCGCTTCCAGCCATGAGCTGGAAGCGCTTCACGCGCGACTTGCACGATGGACGCATCGAGCAAGTCTGCGTTCTTTCGGACAGCGAAAGAACGGAGAGCGAGAGCGAAGAGCTGAGGCAGCTCTTCATGGGAAGTACCACTGAGAGTGAAGACACTCTCAGTGCGAAGACGAAGCGAGAGCGCTTCGAGGAACAAGGTTGGGACTCGCTGAAGTCGAGTCCCTATTACGAATTGTTGAGGGAGTACAAAGACGTACTCCCGGAAGAGATTCCTGCGGAGCTTCCGCAGGATAAGGGCATTCAGCACGAGATTGATCTCGTGCCGGGCACGAAGTACTGTGTCACGCGGCAGTGGCCACTGCCGCGAGAGCAAGTGAAAGCGATCGACGACTTCTTTGAAAGTCGTCGTAAAGCAGGACAAGTGCGGGAATCAAAGTCCCCGCACAGTGCTCCGACGTTCTGTGTCAAGAAGCCACAGGGCGGATGGCGCATCGTTCATGCCTACAACAAGCTGAACGATGCGACGGTACCGGCGCAGACGCCGATACCGCGAAAAGATGTTATCATCGATTCGATGGCCGGGAGCACCGTTTACAGTGCTCTCGACTTGCGAGATGGATTTTATCAAATCCTAATGCGTGAGAGCGATATCCCTCTCACGGCAGTGAGCACGCCAAGCGGCATGCTCTGGGAATGGCTAGTAATGCCACAGGGGCTTAAGAACGCCCCTGCGACTTTCAACAGGTGCGTGACGCACTTGTTGCGCTCGGTGCGCGACTTCGCACCGAGCTACTTCGATGATGTATTCATCCACAGCCGGGCTGTGGACGGGAAGACCGACGTAGAGATGCACAGGGTGCATCTCCGGAAGCTACTTGAGCTTATGCGAAAGCATAAGCTCTACGCGAACCTGAAGAAGTGTATCTTCGGGGCGAGCGAGATACCCGTCCTCGGGTGTCTCGTAGGGAAGAATGGTGTTCGCCCTGACCCGGAAAAGGTCAGAGTGATCAATGAATGGCCAACGCCTTCAAGTGTCAAGGAACTGAGGCAGTTCCTTGGCTTGGCCACGTACTTGTGCAAGTACGTGGAGGATTATGCGGGCAAGATCCGCCCGCTGTCACAGCTTCTTAAGAAAGAAGCTGTGTGGAATTGGACACCCGATTGCCAAAAGGCATTCGATGCAGTCAAGCGGGGCTTGACTGAGGCGCCGATCTTGGCAGTGGCTGACCAAGATCGCCCATTTCACGTAGTGTGTGACGCATCCGATTTCGCGATCGGATGCGCGTTGATGCAGCACGATCACGAGGGCCGTGATCGTGTCGTCTACTACCAATCGCGTCA OLD KEY: TTTCGCGATCGGATGCGCGTTGATGCAGCACGATC NEW KEY: GGCCGTGATCGTGTCGTCTACTACCAATCGCGTCA ........ _A_ 0000000X00000000000X00X00XX0000000X0000XX100X0000X0000XX00X00000010X00X0XX0 __47__ ........ _T_ 00000X00X00X0X00X0X00X00000X0000X0000X000000000X000000000X090000X000X000000 __47__ ........ _G_ XX00X0X000X0X00X0000000000000X0X000X00X009000X00X0X0X0000000009X08000X0000X __47__ ........ _C_ 00XX00000X0000X00X00X00XX000X0X00X00X00000XX00X0000X09009000XX0000X0000X000 __47__ ........ _N_ 000000000000000000000000000000000000000000000000000000000000000000000000000 __47__ ........ ALL OOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOwwwwwwwwwwwwwwwwwvvutttssrrqppmj __47__ ******** *** ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^**************************************** __47__ ######## CNS GGCCGTGATCGTGTCGTCTACTACCAATCGCGTCAGCTGAAgCCAGCTGAGCGcAAcTAtCCgGTgCATGACAAG __47__ ######## QLT XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX+XXXXXXXXXXX+XX+XX+XX+XX+XXXXXXXXX __47__ >CONSENSUS__47__ Length: 1915 [gain: 40] ATGGCGTCGAGGTGACGAAGGCGTGTCAACTCCGGGAGTTGACGCTGCAAACAGTGCGGACGGTTGCAAACGTACCGCACTGACGCAATTTGCATGCTGTCGTGCAGCCGGGCTGCACGACGAAGCGCCATGCGATCAAGCCGGGCTTGATATCGCGCGCCCGCAGACAGGGTCTGCCGGCGAAGGGACACATTACCGTGCAGCCGGGCTGCACGAAGGAAAATGCGGTCAAGCCGGGCTTGATACCGCGCGCCCGCGGACAGGGTCCGCCGGCGAACGACTGTCCACGGCCGGGCCTGGACCAGAAGAACAACTGTGCGGAGCCGGGCTCCGCACAACAAGAAGACGGCGCAAGCGGAAAACGCTGCGCAAGTCTCGGTCCGGGACCGAGACGCAACAAGAGCAGTCTGCTGGGCAGACTGCGGCGGTGACGCCGAATGTCAAGACGCTAAGCGTCTTGACGCGCACCGATACTGGATTCCAGTATCGTGACATGGAACTCGCTAGTCCTCCGACGACGGCGTCGGAGTTGACTTCGCTTCCAGCCATGAGCTGGAAGCGCTTCACGCGCGACTTGCACGATGGACGCATCGAGCAAGTCTGCGTTCTTTCGGACAGCGAAAGAACGGAGAGCGAGAGCGAAGAGCTGAGGCAGCTCTTCATGGGAAGTACCACTGAGAGTGAAGACACTCTCAGTGCGAAGACGAAGCGAGAGCGCTTCGAGGAACAAGGTTGGGACTCGCTGAAGTCGAGTCCCTATTACGAATTGTTGAGGGAGTACAAAGACGTACTCCCGGAAGAGATTCCTGCGGAGCTTCCGCAGGATAAGGGCATTCAGCACGAGATTGATCTCGTGCCGGGCACGAAGTACTGTGTCACGCGGCAGTGGCCACTGCCGCGAGAGCAAGTGAAAGCGATCGACGACTTCTTTGAAAGTCGTCGTAAAGCAGGACAAGTGCGGGAATCAAAGTCCCCGCACAGTGCTCCGACGTTCTGTGTCAAGAAGCCACAGGGCGGATGGCGCATCGTTCATGCCTACAACAAGCTGAACGATGCGACGGTACCGGCGCAGACGCCGATACCGCGAAAAGATGTTATCATCGATTCGATGGCCGGGAGCACCGTTTACAGTGCTCTCGACTTGCGAGATGGATTTTATCAAATCCTAATGCGTGAGAGCGATATCCCTCTCACGGCAGTGAGCACGCCAAGCGGCATGCTCTGGGAATGGCTAGTAATGCCACAGGGGCTTAAGAACGCCCCTGCGACTTTCAACAGGTGCGTGACGCACTTGTTGCGCTCGGTGCGCGACTTCGCACCGAGCTACTTCGATGATGTATTCATCCACAGCCGGGCTGTGGACGGGAAGACCGACGTAGAGATGCACAGGGTGCATCTCCGGAAGCTACTTGAGCTTATGCGAAAGCATAAGCTCTACGCGAACCTGAAGAAGTGTATCTTCGGGGCGAGCGAGATACCCGTCCTCGGGTGTCTCGTAGGGAAGAATGGTGTTCGCCCTGACCCGGAAAAGGTCAGAGTGATCAATGAATGGCCAACGCCTTCAAGTGTCAAGGAACTGAGGCAGTTCCTTGGCTTGGCCACGTACTTGTGCAAGTACGTGGAGGATTATGCGGGCAAGATCCGCCCGCTGTCACAGCTTCTTAAGAAAGAAGCTGTGTGGAATTGGACACCCGATTGCCAAAAGGCATTCGATGCAGTCAAGCGGGGCTTGACTGAGGCGCCGATCTTGGCAGTGGCTGACCAAGATCGCCCATTTCACGTAGTGTGTGACGCATCCGATTTCGCGATCGGATGCGCGTTGATGCAGCACGATCACGAGGGCCGTGATCGTGTCGTCTACTACCAATCGCGTCAGCTGAAGCCAGCTGAGCGCAACTATCCGGTGCATGACAAG OLD KEY: GGCCGTGATCGTGTCGTCTACTACCAATCGCGTCA NEW KEY: AGCCAGCTGAGCGCAACTATCCGGTGCATGACAAG ........ _A_ X000X0000X0000XX00X00000000X00X0XX00XX000000000X00XX20X000X00000XXX000000X0 __48__ ........ _T_ 0000000X000000000X0X0000X000X0000000000900XX0000X0000X070000X0000000XX00000 __48__ ........ _G_ 0X000X00X0X0X000000000XX0X000X0000XX00000000X0000X008000X00000X0000X0000X0X __48__ ........ _C_ 00XX00X0000X0X00X000XX0000X0000X000000X0XX000XX0000000030X0X0X0X000000XX000 __48__ ........ _N_ 000000000000000000000000000000000000000000000000000000000000000000000000000 __48__ ........ ALL OOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOwwwwwwwwwwwwwwvvuuttsssrrqqppok __48__ ******** *** ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^**************************************** __48__ ######## CNS AGCCAGCTGAGCGCAACTATCCGGTGCATGACAAGGAACtCCTTGCCATGAAgTAtGCACTCGCAAAGTTCCGAG __48__ ######## QLT XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX+XXXXXXXXXXXX+XX@XXXXXXXXXXXXXXXXXXX __48__ >CONSENSUS__48__ Length: 1955 [gain: 40] ATGGCGTCGAGGTGACGAAGGCGTGTCAACTCCGGGAGTTGACGCTGCAAACAGTGCGGACGGTTGCAAACGTACCGCACTGACGCAATTTGCATGCTGTCGTGCAGCCGGGCTGCACGACGAAGCGCCATGCGATCAAGCCGGGCTTGATATCGCGCGCCCGCAGACAGGGTCTGCCGGCGAAGGGACACATTACCGTGCAGCCGGGCTGCACGAAGGAAAATGCGGTCAAGCCGGGCTTGATACCGCGCGCCCGCGGACAGGGTCCGCCGGCGAACGACTGTCCACGGCCGGGCCTGGACCAGAAGAACAACTGTGCGGAGCCGGGCTCCGCACAACAAGAAGACGGCGCAAGCGGAAAACGCTGCGCAAGTCTCGGTCCGGGACCGAGACGCAACAAGAGCAGTCTGCTGGGCAGACTGCGGCGGTGACGCCGAATGTCAAGACGCTAAGCGTCTTGACGCGCACCGATACTGGATTCCAGTATCGTGACATGGAACTCGCTAGTCCTCCGACGACGGCGTCGGAGTTGACTTCGCTTCCAGCCATGAGCTGGAAGCGCTTCACGCGCGACTTGCACGATGGACGCATCGAGCAAGTCTGCGTTCTTTCGGACAGCGAAAGAACGGAGAGCGAGAGCGAAGAGCTGAGGCAGCTCTTCATGGGAAGTACCACTGAGAGTGAAGACACTCTCAGTGCGAAGACGAAGCGAGAGCGCTTCGAGGAACAAGGTTGGGACTCGCTGAAGTCGAGTCCCTATTACGAATTGTTGAGGGAGTACAAAGACGTACTCCCGGAAGAGATTCCTGCGGAGCTTCCGCAGGATAAGGGCATTCAGCACGAGATTGATCTCGTGCCGGGCACGAAGTACTGTGTCACGCGGCAGTGGCCACTGCCGCGAGAGCAAGTGAAAGCGATCGACGACTTCTTTGAAAGTCGTCGTAAAGCAGGACAAGTGCGGGAATCAAAGTCCCCGCACAGTGCTCCGACGTTCTGTGTCAAGAAGCCACAGGGCGGATGGCGCATCGTTCATGCCTACAACAAGCTGAACGATGCGACGGTACCGGCGCAGACGCCGATACCGCGAAAAGATGTTATCATCGATTCGATGGCCGGGAGCACCGTTTACAGTGCTCTCGACTTGCGAGATGGATTTTATCAAATCCTAATGCGTGAGAGCGATATCCCTCTCACGGCAGTGAGCACGCCAAGCGGCATGCTCTGGGAATGGCTAGTAATGCCACAGGGGCTTAAGAACGCCCCTGCGACTTTCAACAGGTGCGTGACGCACTTGTTGCGCTCGGTGCGCGACTTCGCACCGAGCTACTTCGATGATGTATTCATCCACAGCCGGGCTGTGGACGGGAAGACCGACGTAGAGATGCACAGGGTGCATCTCCGGAAGCTACTTGAGCTTATGCGAAAGCATAAGCTCTACGCGAACCTGAAGAAGTGTATCTTCGGGGCGAGCGAGATACCCGTCCTCGGGTGTCTCGTAGGGAAGAATGGTGTTCGCCCTGACCCGGAAAAGGTCAGAGTGATCAATGAATGGCCAACGCCTTCAAGTGTCAAGGAACTGAGGCAGTTCCTTGGCTTGGCCACGTACTTGTGCAAGTACGTGGAGGATTATGCGGGCAAGATCCGCCCGCTGTCACAGCTTCTTAAGAAAGAAGCTGTGTGGAATTGGACACCCGATTGCCAAAAGGCATTCGATGCAGTCAAGCGGGGCTTGACTGAGGCGCCGATCTTGGCAGTGGCTGACCAAGATCGCCCATTTCACGTAGTGTGTGACGCATCCGATTTCGCGATCGGATGCGCGTTGATGCAGCACGATCACGAGGGCCGTGATCGTGTCGTCTACTACCAATCGCGTCAGCTGAAGCCAGCTGAGCGCAACTATCCGGTGCATGACAAGGAACTCCTTGCCATGAAGTATGCACTCGCAAAGTTCCGAG OLD KEY: AGCCAGCTGAGCGCAACTATCCGGTGCATGACAAG NEW KEY: CCTTGCCATGAAGTATGCACTCGCAAAGTTCCGAG ........ _A_ 0000000X00XX00X000X00000XXX000000X0000X0000000002X00X0X0090000000000X0X000X __49__ ........ _T_ 00XX0000X0000X0X0000X0000000XX00000X0X05XX00XX00000X000000XXX0X00X0X0000000 __49__ ........ _G_ 0000X0000X00X000X00000X0000X0000X0X0X00000X000XX80X00X0000000X0XX00000000X0 __49__ ........ _C_ XX000XX0000000000X0X0X0X000000XX00000005000X00000000000XX000000000X00X09X00 __49__ ........ _N_ 000000000000000000000000000000000000000000000000000000000000000000000000000 __49__ ........ ALL OOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOwwwwwwwwwwwwwwwwwwwwvvuuttssrrqppoomjf __49__ ******** *** ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^**************************************** __49__ ######## CNS CCTTGCCATGAAGTATGCACTCGCAAAGTTCCGAGTGTAcTTGCTTGGgAGTAGACCaTTTGTGGTCTACAcCGA __49__ ######## QLT XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX?XXXXXXXX+XXXXXXXX+XXXXXXXXXXXXX+XXX __49__ >CONSENSUS__49__ Length: 1995 [gain: 40] ATGGCGTCGAGGTGACGAAGGCGTGTCAACTCCGGGAGTTGACGCTGCAAACAGTGCGGACGGTTGCAAACGTACCGCACTGACGCAATTTGCATGCTGTCGTGCAGCCGGGCTGCACGACGAAGCGCCATGCGATCAAGCCGGGCTTGATATCGCGCGCCCGCAGACAGGGTCTGCCGGCGAAGGGACACATTACCGTGCAGCCGGGCTGCACGAAGGAAAATGCGGTCAAGCCGGGCTTGATACCGCGCGCCCGCGGACAGGGTCCGCCGGCGAACGACTGTCCACGGCCGGGCCTGGACCAGAAGAACAACTGTGCGGAGCCGGGCTCCGCACAACAAGAAGACGGCGCAAGCGGAAAACGCTGCGCAAGTCTCGGTCCGGGACCGAGACGCAACAAGAGCAGTCTGCTGGGCAGACTGCGGCGGTGACGCCGAATGTCAAGACGCTAAGCGTCTTGACGCGCACCGATACTGGATTCCAGTATCGTGACATGGAACTCGCTAGTCCTCCGACGACGGCGTCGGAGTTGACTTCGCTTCCAGCCATGAGCTGGAAGCGCTTCACGCGCGACTTGCACGATGGACGCATCGAGCAAGTCTGCGTTCTTTCGGACAGCGAAAGAACGGAGAGCGAGAGCGAAGAGCTGAGGCAGCTCTTCATGGGAAGTACCACTGAGAGTGAAGACACTCTCAGTGCGAAGACGAAGCGAGAGCGCTTCGAGGAACAAGGTTGGGACTCGCTGAAGTCGAGTCCCTATTACGAATTGTTGAGGGAGTACAAAGACGTACTCCCGGAAGAGATTCCTGCGGAGCTTCCGCAGGATAAGGGCATTCAGCACGAGATTGATCTCGTGCCGGGCACGAAGTACTGTGTCACGCGGCAGTGGCCACTGCCGCGAGAGCAAGTGAAAGCGATCGACGACTTCTTTGAAAGTCGTCGTAAAGCAGGACAAGTGCGGGAATCAAAGTCCCCGCACAGTGCTCCGACGTTCTGTGTCAAGAAGCCACAGGGCGGATGGCGCATCGTTCATGCCTACAACAAGCTGAACGATGCGACGGTACCGGCGCAGACGCCGATACCGCGAAAAGATGTTATCATCGATTCGATGGCCGGGAGCACCGTTTACAGTGCTCTCGACTTGCGAGATGGATTTTATCAAATCCTAATGCGTGAGAGCGATATCCCTCTCACGGCAGTGAGCACGCCAAGCGGCATGCTCTGGGAATGGCTAGTAATGCCACAGGGGCTTAAGAACGCCCCTGCGACTTTCAACAGGTGCGTGACGCACTTGTTGCGCTCGGTGCGCGACTTCGCACCGAGCTACTTCGATGATGTATTCATCCACAGCCGGGCTGTGGACGGGAAGACCGACGTAGAGATGCACAGGGTGCATCTCCGGAAGCTACTTGAGCTTATGCGAAAGCATAAGCTCTACGCGAACCTGAAGAAGTGTATCTTCGGGGCGAGCGAGATACCCGTCCTCGGGTGTCTCGTAGGGAAGAATGGTGTTCGCCCTGACCCGGAAAAGGTCAGAGTGATCAATGAATGGCCAACGCCTTCAAGTGTCAAGGAACTGAGGCAGTTCCTTGGCTTGGCCACGTACTTGTGCAAGTACGTGGAGGATTATGCGGGCAAGATCCGCCCGCTGTCACAGCTTCTTAAGAAAGAAGCTGTGTGGAATTGGACACCCGATTGCCAAAAGGCATTCGATGCAGTCAAGCGGGGCTTGACTGAGGCGCCGATCTTGGCAGTGGCTGACCAAGATCGCCCATTTCACGTAGTGTGTGACGCATCCGATTTCGCGATCGGATGCGCGTTGATGCAGCACGATCACGAGGGCCGTGATCGTGTCGTCTACTACCAATCGCGTCAGCTGAAGCCAGCTGAGCGCAACTATCCGGTGCATGACAAGGAACTCCTTGCCATGAAGTATGCACTCGCAAAGTTCCGAGTGTACTTGCTTGGGAGTAGACCATTTGTGGTCTACACCGA OLD KEY: CCTTGCCATGAAGTATGCACTCGCAAAGTTCCGAG NEW KEY: TTGCTTGGGAGTAGACCATTTGTGGTCTACACCGA ........ _A_ 000000000X00X0X00X0000000000X0X000X00X000200X000000X0000X000XX000100X0X0X04 __50__ ........ _T_ XX00XX00000X000000XXX0X00X0X0000000100X007X000X00020000000X0000X000000000X6 __50__ ........ _G_ 00X000XXX0X00X0000000X0XX00000000X00000X0000000X0X0000X00X0X00X009000000000 __50__ ........ _C_ 000X00000000000XX000000000X00X0XX009X000X00X0X00X070X90X00000000X0XX0X0X000 __50__ ........ _N_ 000000000000000000000000000000000000000000000000000000000000000000000000000 __50__ ........ ALL wwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwvvuuuutttsssrrqqqpppooonkjd __50__ ******** *** ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^**************************************** __50__ ######## CNS TTGCTTGGGAGTAGACCATTTGTGGTCTACACCGAcCATGCtTCACTGCGcACcGCAGTGAAGTCgCCACACATt __50__ ######## QLT XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX+XXXXX@XXXXXXXX@XX+XXXXXXXXXXX+XXXXXXXX! __50__ >CONSENSUS__50__ Length: 2035 [gain: 40] ATGGCGTCGAGGTGACGAAGGCGTGTCAACTCCGGGAGTTGACGCTGCAAACAGTGCGGACGGTTGCAAACGTACCGCACTGACGCAATTTGCATGCTGTCGTGCAGCCGGGCTGCACGACGAAGCGCCATGCGATCAAGCCGGGCTTGATATCGCGCGCCCGCAGACAGGGTCTGCCGGCGAAGGGACACATTACCGTGCAGCCGGGCTGCACGAAGGAAAATGCGGTCAAGCCGGGCTTGATACCGCGCGCCCGCGGACAGGGTCCGCCGGCGAACGACTGTCCACGGCCGGGCCTGGACCAGAAGAACAACTGTGCGGAGCCGGGCTCCGCACAACAAGAAGACGGCGCAAGCGGAAAACGCTGCGCAAGTCTCGGTCCGGGACCGAGACGCAACAAGAGCAGTCTGCTGGGCAGACTGCGGCGGTGACGCCGAATGTCAAGACGCTAAGCGTCTTGACGCGCACCGATACTGGATTCCAGTATCGTGACATGGAACTCGCTAGTCCTCCGACGACGGCGTCGGAGTTGACTTCGCTTCCAGCCATGAGCTGGAAGCGCTTCACGCGCGACTTGCACGATGGACGCATCGAGCAAGTCTGCGTTCTTTCGGACAGCGAAAGAACGGAGAGCGAGAGCGAAGAGCTGAGGCAGCTCTTCATGGGAAGTACCACTGAGAGTGAAGACACTCTCAGTGCGAAGACGAAGCGAGAGCGCTTCGAGGAACAAGGTTGGGACTCGCTGAAGTCGAGTCCCTATTACGAATTGTTGAGGGAGTACAAAGACGTACTCCCGGAAGAGATTCCTGCGGAGCTTCCGCAGGATAAGGGCATTCAGCACGAGATTGATCTCGTGCCGGGCACGAAGTACTGTGTCACGCGGCAGTGGCCACTGCCGCGAGAGCAAGTGAAAGCGATCGACGACTTCTTTGAAAGTCGTCGTAAAGCAGGACAAGTGCGGGAATCAAAGTCCCCGCACAGTGCTCCGACGTTCTGTGTCAAGAAGCCACAGGGCGGATGGCGCATCGTTCATGCCTACAACAAGCTGAACGATGCGACGGTACCGGCGCAGACGCCGATACCGCGAAAAGATGTTATCATCGATTCGATGGCCGGGAGCACCGTTTACAGTGCTCTCGACTTGCGAGATGGATTTTATCAAATCCTAATGCGTGAGAGCGATATCCCTCTCACGGCAGTGAGCACGCCAAGCGGCATGCTCTGGGAATGGCTAGTAATGCCACAGGGGCTTAAGAACGCCCCTGCGACTTTCAACAGGTGCGTGACGCACTTGTTGCGCTCGGTGCGCGACTTCGCACCGAGCTACTTCGATGATGTATTCATCCACAGCCGGGCTGTGGACGGGAAGACCGACGTAGAGATGCACAGGGTGCATCTCCGGAAGCTACTTGAGCTTATGCGAAAGCATAAGCTCTACGCGAACCTGAAGAAGTGTATCTTCGGGGCGAGCGAGATACCCGTCCTCGGGTGTCTCGTAGGGAAGAATGGTGTTCGCCCTGACCCGGAAAAGGTCAGAGTGATCAATGAATGGCCAACGCCTTCAAGTGTCAAGGAACTGAGGCAGTTCCTTGGCTTGGCCACGTACTTGTGCAAGTACGTGGAGGATTATGCGGGCAAGATCCGCCCGCTGTCACAGCTTCTTAAGAAAGAAGCTGTGTGGAATTGGACACCCGATTGCCAAAAGGCATTCGATGCAGTCAAGCGGGGCTTGACTGAGGCGCCGATCTTGGCAGTGGCTGACCAAGATCGCCCATTTCACGTAGTGTGTGACGCATCCGATTTCGCGATCGGATGCGCGTTGATGCAGCACGATCACGAGGGCCGTGATCGTGTCGTCTACTACCAATCGCGTCAGCTGAAGCCAGCTGAGCGCAACTATCCGGTGCATGACAAGGAACTCCTTGCCATGAAGTATGCACTCGCAAAGTTCCGAGTGTACTTGCTTGGGAGTAGACCATTTGTGGTCTACACCGACCATGCTTCACTGCGCACCGCAGTGAAGTCGCCACACATT OLD KEY: TTGCTTGGGAGTAGACCATTTGTGGTCTACACCGA NEW KEY: CTTCACTGCGCACCGCAGTGAAGTCGCCACACATT ........ _A_ 0000X000000X0000X000XX000000X0X0X0000X0XXX0XX00000X0X00000000X0000000000X00 __51__ ........ _T_ 0XX000X00000000000X0000X000000000XXX000000000X0000000X000X0X00XX0XXX000000X __51__ ........ _G_ 0000000X0X0000X00X0X00X00X0000000000000000X000XX0X0X00XX000000000000X0XX0X0 __51__ ........ _C_ X00X0X00X0X0XX0X00000000X0XX0X0X0000X0X000000000X0000000X0X0X000X0000X00000 __51__ ........ _N_ 000000000000000000000000000000000000000000000000000000000000000000000000000 __51__ ........ ALL qqqqqqqqqqqqqqqqqqqqqqqqqqqqqqqqqqqqqqqqqqpppppppppooooooooonnmmllkkjhgfdbb __51__ ******** *** ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^**************************************** __51__ ######## CNS CTTCACTGCGCACCGCAGTGAAGTCGCCACACATTTCACAAAGAATGGCGAGATGGCTCTCATTCTTTGCGGAGT __51__ ######## QLT XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX __51__ >CONSENSUS__51__ Length: 2075 [gain: 40] ATGGCGTCGAGGTGACGAAGGCGTGTCAACTCCGGGAGTTGACGCTGCAAACAGTGCGGACGGTTGCAAACGTACCGCACTGACGCAATTTGCATGCTGTCGTGCAGCCGGGCTGCACGACGAAGCGCCATGCGATCAAGCCGGGCTTGATATCGCGCGCCCGCAGACAGGGTCTGCCGGCGAAGGGACACATTACCGTGCAGCCGGGCTGCACGAAGGAAAATGCGGTCAAGCCGGGCTTGATACCGCGCGCCCGCGGACAGGGTCCGCCGGCGAACGACTGTCCACGGCCGGGCCTGGACCAGAAGAACAACTGTGCGGAGCCGGGCTCCGCACAACAAGAAGACGGCGCAAGCGGAAAACGCTGCGCAAGTCTCGGTCCGGGACCGAGACGCAACAAGAGCAGTCTGCTGGGCAGACTGCGGCGGTGACGCCGAATGTCAAGACGCTAAGCGTCTTGACGCGCACCGATACTGGATTCCAGTATCGTGACATGGAACTCGCTAGTCCTCCGACGACGGCGTCGGAGTTGACTTCGCTTCCAGCCATGAGCTGGAAGCGCTTCACGCGCGACTTGCACGATGGACGCATCGAGCAAGTCTGCGTTCTTTCGGACAGCGAAAGAACGGAGAGCGAGAGCGAAGAGCTGAGGCAGCTCTTCATGGGAAGTACCACTGAGAGTGAAGACACTCTCAGTGCGAAGACGAAGCGAGAGCGCTTCGAGGAACAAGGTTGGGACTCGCTGAAGTCGAGTCCCTATTACGAATTGTTGAGGGAGTACAAAGACGTACTCCCGGAAGAGATTCCTGCGGAGCTTCCGCAGGATAAGGGCATTCAGCACGAGATTGATCTCGTGCCGGGCACGAAGTACTGTGTCACGCGGCAGTGGCCACTGCCGCGAGAGCAAGTGAAAGCGATCGACGACTTCTTTGAAAGTCGTCGTAAAGCAGGACAAGTGCGGGAATCAAAGTCCCCGCACAGTGCTCCGACGTTCTGTGTCAAGAAGCCACAGGGCGGATGGCGCATCGTTCATGCCTACAACAAGCTGAACGATGCGACGGTACCGGCGCAGACGCCGATACCGCGAAAAGATGTTATCATCGATTCGATGGCCGGGAGCACCGTTTACAGTGCTCTCGACTTGCGAGATGGATTTTATCAAATCCTAATGCGTGAGAGCGATATCCCTCTCACGGCAGTGAGCACGCCAAGCGGCATGCTCTGGGAATGGCTAGTAATGCCACAGGGGCTTAAGAACGCCCCTGCGACTTTCAACAGGTGCGTGACGCACTTGTTGCGCTCGGTGCGCGACTTCGCACCGAGCTACTTCGATGATGTATTCATCCACAGCCGGGCTGTGGACGGGAAGACCGACGTAGAGATGCACAGGGTGCATCTCCGGAAGCTACTTGAGCTTATGCGAAAGCATAAGCTCTACGCGAACCTGAAGAAGTGTATCTTCGGGGCGAGCGAGATACCCGTCCTCGGGTGTCTCGTAGGGAAGAATGGTGTTCGCCCTGACCCGGAAAAGGTCAGAGTGATCAATGAATGGCCAACGCCTTCAAGTGTCAAGGAACTGAGGCAGTTCCTTGGCTTGGCCACGTACTTGTGCAAGTACGTGGAGGATTATGCGGGCAAGATCCGCCCGCTGTCACAGCTTCTTAAGAAAGAAGCTGTGTGGAATTGGACACCCGATTGCCAAAAGGCATTCGATGCAGTCAAGCGGGGCTTGACTGAGGCGCCGATCTTGGCAGTGGCTGACCAAGATCGCCCATTTCACGTAGTGTGTGACGCATCCGATTTCGCGATCGGATGCGCGTTGATGCAGCACGATCACGAGGGCCGTGATCGTGTCGTCTACTACCAATCGCGTCAGCTGAAGCCAGCTGAGCGCAACTATCCGGTGCATGACAAGGAACTCCTTGCCATGAAGTATGCACTCGCAAAGTTCCGAGTGTACTTGCTTGGGAGTAGACCATTTGTGGTCTACACCGACCATGCTTCACTGCGCACCGCAGTGAAGTCGCCACACATTTCACAAAGAATGGCGAGATGGCTCTCATTCTTTGCGGAGT OLD KEY: CTTCACTGCGCACCGCAGTGAAGTCGCCACACATT NEW KEY: AAGAATGGCGAGATGGCTCTCATTCTTTGCGGAGT ........ _A_ XX0XX00000X0X00000000X0000000000X00X0XX00000000000XX0X0XXX00000XX0X000XX000 __52__ ........ _T_ 00000X0000000X000X0X00XX0XXX000000X0X000XX00000X0000X000000000000009X00050X __52__ ........ _G_ 00X000XX0X0X00XX000000000000X0XX0X0000000000XXX00X00000000000XX00X000X000X0 __52__ ........ _C_ 00000000X0000000X0X0X000X0000X000000000X00XX0000X00000X000XXX00000000000500 __52__ ........ _N_ 000000000000000000000000000000000000000000000000000000000000000000000000000 __52__ ........ ALL PPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPOOOOOOOOOOOOwwwwwwwwwwwwvuutrrqpon __52__ ******** *** ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^**************************************** __52__ ######## CNS AAGAATGGCGAGATGGCTCTCATTCTTTGCGGAGTATAACTTCCGGGTCGAATACAAACCCGGAAGAtTGAAcGT __52__ ######## QLT XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX+XXXX?XX __52__ >CONSENSUS__52__ Length: 2115 [gain: 40] ATGGCGTCGAGGTGACGAAGGCGTGTCAACTCCGGGAGTTGACGCTGCAAACAGTGCGGACGGTTGCAAACGTACCGCACTGACGCAATTTGCATGCTGTCGTGCAGCCGGGCTGCACGACGAAGCGCCATGCGATCAAGCCGGGCTTGATATCGCGCGCCCGCAGACAGGGTCTGCCGGCGAAGGGACACATTACCGTGCAGCCGGGCTGCACGAAGGAAAATGCGGTCAAGCCGGGCTTGATACCGCGCGCCCGCGGACAGGGTCCGCCGGCGAACGACTGTCCACGGCCGGGCCTGGACCAGAAGAACAACTGTGCGGAGCCGGGCTCCGCACAACAAGAAGACGGCGCAAGCGGAAAACGCTGCGCAAGTCTCGGTCCGGGACCGAGACGCAACAAGAGCAGTCTGCTGGGCAGACTGCGGCGGTGACGCCGAATGTCAAGACGCTAAGCGTCTTGACGCGCACCGATACTGGATTCCAGTATCGTGACATGGAACTCGCTAGTCCTCCGACGACGGCGTCGGAGTTGACTTCGCTTCCAGCCATGAGCTGGAAGCGCTTCACGCGCGACTTGCACGATGGACGCATCGAGCAAGTCTGCGTTCTTTCGGACAGCGAAAGAACGGAGAGCGAGAGCGAAGAGCTGAGGCAGCTCTTCATGGGAAGTACCACTGAGAGTGAAGACACTCTCAGTGCGAAGACGAAGCGAGAGCGCTTCGAGGAACAAGGTTGGGACTCGCTGAAGTCGAGTCCCTATTACGAATTGTTGAGGGAGTACAAAGACGTACTCCCGGAAGAGATTCCTGCGGAGCTTCCGCAGGATAAGGGCATTCAGCACGAGATTGATCTCGTGCCGGGCACGAAGTACTGTGTCACGCGGCAGTGGCCACTGCCGCGAGAGCAAGTGAAAGCGATCGACGACTTCTTTGAAAGTCGTCGTAAAGCAGGACAAGTGCGGGAATCAAAGTCCCCGCACAGTGCTCCGACGTTCTGTGTCAAGAAGCCACAGGGCGGATGGCGCATCGTTCATGCCTACAACAAGCTGAACGATGCGACGGTACCGGCGCAGACGCCGATACCGCGAAAAGATGTTATCATCGATTCGATGGCCGGGAGCACCGTTTACAGTGCTCTCGACTTGCGAGATGGATTTTATCAAATCCTAATGCGTGAGAGCGATATCCCTCTCACGGCAGTGAGCACGCCAAGCGGCATGCTCTGGGAATGGCTAGTAATGCCACAGGGGCTTAAGAACGCCCCTGCGACTTTCAACAGGTGCGTGACGCACTTGTTGCGCTCGGTGCGCGACTTCGCACCGAGCTACTTCGATGATGTATTCATCCACAGCCGGGCTGTGGACGGGAAGACCGACGTAGAGATGCACAGGGTGCATCTCCGGAAGCTACTTGAGCTTATGCGAAAGCATAAGCTCTACGCGAACCTGAAGAAGTGTATCTTCGGGGCGAGCGAGATACCCGTCCTCGGGTGTCTCGTAGGGAAGAATGGTGTTCGCCCTGACCCGGAAAAGGTCAGAGTGATCAATGAATGGCCAACGCCTTCAAGTGTCAAGGAACTGAGGCAGTTCCTTGGCTTGGCCACGTACTTGTGCAAGTACGTGGAGGATTATGCGGGCAAGATCCGCCCGCTGTCACAGCTTCTTAAGAAAGAAGCTGTGTGGAATTGGACACCCGATTGCCAAAAGGCATTCGATGCAGTCAAGCGGGGCTTGACTGAGGCGCCGATCTTGGCAGTGGCTGACCAAGATCGCCCATTTCACGTAGTGTGTGACGCATCCGATTTCGCGATCGGATGCGCGTTGATGCAGCACGATCACGAGGGCCGTGATCGTGTCGTCTACTACCAATCGCGTCAGCTGAAGCCAGCTGAGCGCAACTATCCGGTGCATGACAAGGAACTCCTTGCCATGAAGTATGCACTCGCAAAGTTCCGAGTGTACTTGCTTGGGAGTAGACCATTTGTGGTCTACACCGACCATGCTTCACTGCGCACCGCAGTGAAGTCGCCACACATTTCACAAAGAATGGCGAGATGGCTCTCATTCTTTGCGGAGTATAACTTCCGGGTCGAATACAAACCCGGAAGATTGAACGT OLD KEY: AAGAATGGCGAGATGGCTCTCATTCTTTGCGGAGT NEW KEY: TTCCGGGTCGAATACAAACCCGGAAGATTGAACGT ........ _A_ 0000000000XX0X0XXX00000XX0X000XX00000000000X000000X00X0000000010X00X000X0XX __53__ ........ _T_ XX00000X0000X00000000000000XX00000X00X0000000000XX0X0000X000000000X09000000 __53__ ........ _G_ 0000XXX00X00000000000XX00X000X000X0XX0XX00X00X0X0000000X00XX009X00000X00X00 __53__ ........ _C_ 00XX0000X00000X000XXX00000000000X0000000XX00X0X00000X0X00X00XX000X0010X0000 __53__ ........ _N_ 000000000000000000000000000000000000000000000000000000000000000000000000000 __53__ ........ ALL wwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwvvvvuuuttssrrrqqqqqqpppoonljfe __53__ ******** *** ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^**************************************** __53__ ######## CNS TTCCGGGTCGAATACAAACCCGGAAGATTGAACGTGGTGGCCGACGCGTTATCACGTCGGCCgGACTAtGCAGAA __53__ ######## QLT XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX+XXXXX+XXXXXX __53__ >CONSENSUS__53__ Length: 2155 [gain: 40] ATGGCGTCGAGGTGACGAAGGCGTGTCAACTCCGGGAGTTGACGCTGCAAACAGTGCGGACGGTTGCAAACGTACCGCACTGACGCAATTTGCATGCTGTCGTGCAGCCGGGCTGCACGACGAAGCGCCATGCGATCAAGCCGGGCTTGATATCGCGCGCCCGCAGACAGGGTCTGCCGGCGAAGGGACACATTACCGTGCAGCCGGGCTGCACGAAGGAAAATGCGGTCAAGCCGGGCTTGATACCGCGCGCCCGCGGACAGGGTCCGCCGGCGAACGACTGTCCACGGCCGGGCCTGGACCAGAAGAACAACTGTGCGGAGCCGGGCTCCGCACAACAAGAAGACGGCGCAAGCGGAAAACGCTGCGCAAGTCTCGGTCCGGGACCGAGACGCAACAAGAGCAGTCTGCTGGGCAGACTGCGGCGGTGACGCCGAATGTCAAGACGCTAAGCGTCTTGACGCGCACCGATACTGGATTCCAGTATCGTGACATGGAACTCGCTAGTCCTCCGACGACGGCGTCGGAGTTGACTTCGCTTCCAGCCATGAGCTGGAAGCGCTTCACGCGCGACTTGCACGATGGACGCATCGAGCAAGTCTGCGTTCTTTCGGACAGCGAAAGAACGGAGAGCGAGAGCGAAGAGCTGAGGCAGCTCTTCATGGGAAGTACCACTGAGAGTGAAGACACTCTCAGTGCGAAGACGAAGCGAGAGCGCTTCGAGGAACAAGGTTGGGACTCGCTGAAGTCGAGTCCCTATTACGAATTGTTGAGGGAGTACAAAGACGTACTCCCGGAAGAGATTCCTGCGGAGCTTCCGCAGGATAAGGGCATTCAGCACGAGATTGATCTCGTGCCGGGCACGAAGTACTGTGTCACGCGGCAGTGGCCACTGCCGCGAGAGCAAGTGAAAGCGATCGACGACTTCTTTGAAAGTCGTCGTAAAGCAGGACAAGTGCGGGAATCAAAGTCCCCGCACAGTGCTCCGACGTTCTGTGTCAAGAAGCCACAGGGCGGATGGCGCATCGTTCATGCCTACAACAAGCTGAACGATGCGACGGTACCGGCGCAGACGCCGATACCGCGAAAAGATGTTATCATCGATTCGATGGCCGGGAGCACCGTTTACAGTGCTCTCGACTTGCGAGATGGATTTTATCAAATCCTAATGCGTGAGAGCGATATCCCTCTCACGGCAGTGAGCACGCCAAGCGGCATGCTCTGGGAATGGCTAGTAATGCCACAGGGGCTTAAGAACGCCCCTGCGACTTTCAACAGGTGCGTGACGCACTTGTTGCGCTCGGTGCGCGACTTCGCACCGAGCTACTTCGATGATGTATTCATCCACAGCCGGGCTGTGGACGGGAAGACCGACGTAGAGATGCACAGGGTGCATCTCCGGAAGCTACTTGAGCTTATGCGAAAGCATAAGCTCTACGCGAACCTGAAGAAGTGTATCTTCGGGGCGAGCGAGATACCCGTCCTCGGGTGTCTCGTAGGGAAGAATGGTGTTCGCCCTGACCCGGAAAAGGTCAGAGTGATCAATGAATGGCCAACGCCTTCAAGTGTCAAGGAACTGAGGCAGTTCCTTGGCTTGGCCACGTACTTGTGCAAGTACGTGGAGGATTATGCGGGCAAGATCCGCCCGCTGTCACAGCTTCTTAAGAAAGAAGCTGTGTGGAATTGGACACCCGATTGCCAAAAGGCATTCGATGCAGTCAAGCGGGGCTTGACTGAGGCGCCGATCTTGGCAGTGGCTGACCAAGATCGCCCATTTCACGTAGTGTGTGACGCATCCGATTTCGCGATCGGATGCGCGTTGATGCAGCACGATCACGAGGGCCGTGATCGTGTCGTCTACTACCAATCGCGTCAGCTGAAGCCAGCTGAGCGCAACTATCCGGTGCATGACAAGGAACTCCTTGCCATGAAGTATGCACTCGCAAAGTTCCGAGTGTACTTGCTTGGGAGTAGACCATTTGTGGTCTACACCGACCATGCTTCACTGCGCACCGCAGTGAAGTCGCCACACATTTCACAAAGAATGGCGAGATGGCTCTCATTCTTTGCGGAGTATAACTTCCGGGTCGAATACAAACCCGGAAGATTGAACGTGGTGGCCGACGCGTTATCACGTCGGCCGGACTATGCAGAA OLD KEY: TTCCGGGTCGAATACAAACCCGGAAGATTGAACGT NEW KEY: CCGACGCGTTATCACGTCGGCCGGACTATGCAGAA ........ _A_ 000X000000X00X0000000000X00X000X0XX0000000X0000XX0000X000X0000X0100X000X00X __54__ ........ _T_ 00000000XX0X0000X000000000X0X00000000X09X0000X000X0000XX0000100X00009000000 __54__ ........ _G_ 00X00X0X0000000X00XX00XX00000X00X00X00X00X00X00000X00000X00X000090X000X0X00 __54__ ........ _C_ XX00X0X00000X0X00X00XX000X0000X00000X001000X00X0000XX00000X09X000X000X000X0 __54__ ........ _N_ 000000000000000000000000000000000000000000000000000000000000000000000000000 __54__ ........ ALL wwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwvvvuuutsssrrrqqppooonljfe __54__ ******** *** ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^**************************************** __54__ ######## CNS CCGACGCGTTATCACGTCGGCCGGACTATGCAGAAGCTGtTGACGTCAATGCCATTGACGcCATgCGAtCGAGCA __54__ ######## QLT XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX+XXXXXXXXXXXXXXXXXXXX+XXX+XXX+XXXXXX __54__ >CONSENSUS__54__ Length: 2195 [gain: 40] ATGGCGTCGAGGTGACGAAGGCGTGTCAACTCCGGGAGTTGACGCTGCAAACAGTGCGGACGGTTGCAAACGTACCGCACTGACGCAATTTGCATGCTGTCGTGCAGCCGGGCTGCACGACGAAGCGCCATGCGATCAAGCCGGGCTTGATATCGCGCGCCCGCAGACAGGGTCTGCCGGCGAAGGGACACATTACCGTGCAGCCGGGCTGCACGAAGGAAAATGCGGTCAAGCCGGGCTTGATACCGCGCGCCCGCGGACAGGGTCCGCCGGCGAACGACTGTCCACGGCCGGGCCTGGACCAGAAGAACAACTGTGCGGAGCCGGGCTCCGCACAACAAGAAGACGGCGCAAGCGGAAAACGCTGCGCAAGTCTCGGTCCGGGACCGAGACGCAACAAGAGCAGTCTGCTGGGCAGACTGCGGCGGTGACGCCGAATGTCAAGACGCTAAGCGTCTTGACGCGCACCGATACTGGATTCCAGTATCGTGACATGGAACTCGCTAGTCCTCCGACGACGGCGTCGGAGTTGACTTCGCTTCCAGCCATGAGCTGGAAGCGCTTCACGCGCGACTTGCACGATGGACGCATCGAGCAAGTCTGCGTTCTTTCGGACAGCGAAAGAACGGAGAGCGAGAGCGAAGAGCTGAGGCAGCTCTTCATGGGAAGTACCACTGAGAGTGAAGACACTCTCAGTGCGAAGACGAAGCGAGAGCGCTTCGAGGAACAAGGTTGGGACTCGCTGAAGTCGAGTCCCTATTACGAATTGTTGAGGGAGTACAAAGACGTACTCCCGGAAGAGATTCCTGCGGAGCTTCCGCAGGATAAGGGCATTCAGCACGAGATTGATCTCGTGCCGGGCACGAAGTACTGTGTCACGCGGCAGTGGCCACTGCCGCGAGAGCAAGTGAAAGCGATCGACGACTTCTTTGAAAGTCGTCGTAAAGCAGGACAAGTGCGGGAATCAAAGTCCCCGCACAGTGCTCCGACGTTCTGTGTCAAGAAGCCACAGGGCGGATGGCGCATCGTTCATGCCTACAACAAGCTGAACGATGCGACGGTACCGGCGCAGACGCCGATACCGCGAAAAGATGTTATCATCGATTCGATGGCCGGGAGCACCGTTTACAGTGCTCTCGACTTGCGAGATGGATTTTATCAAATCCTAATGCGTGAGAGCGATATCCCTCTCACGGCAGTGAGCACGCCAAGCGGCATGCTCTGGGAATGGCTAGTAATGCCACAGGGGCTTAAGAACGCCCCTGCGACTTTCAACAGGTGCGTGACGCACTTGTTGCGCTCGGTGCGCGACTTCGCACCGAGCTACTTCGATGATGTATTCATCCACAGCCGGGCTGTGGACGGGAAGACCGACGTAGAGATGCACAGGGTGCATCTCCGGAAGCTACTTGAGCTTATGCGAAAGCATAAGCTCTACGCGAACCTGAAGAAGTGTATCTTCGGGGCGAGCGAGATACCCGTCCTCGGGTGTCTCGTAGGGAAGAATGGTGTTCGCCCTGACCCGGAAAAGGTCAGAGTGATCAATGAATGGCCAACGCCTTCAAGTGTCAAGGAACTGAGGCAGTTCCTTGGCTTGGCCACGTACTTGTGCAAGTACGTGGAGGATTATGCGGGCAAGATCCGCCCGCTGTCACAGCTTCTTAAGAAAGAAGCTGTGTGGAATTGGACACCCGATTGCCAAAAGGCATTCGATGCAGTCAAGCGGGGCTTGACTGAGGCGCCGATCTTGGCAGTGGCTGACCAAGATCGCCCATTTCACGTAGTGTGTGACGCATCCGATTTCGCGATCGGATGCGCGTTGATGCAGCACGATCACGAGGGCCGTGATCGTGTCGTCTACTACCAATCGCGTCAGCTGAAGCCAGCTGAGCGCAACTATCCGGTGCATGACAAGGAACTCCTTGCCATGAAGTATGCACTCGCAAAGTTCCGAGTGTACTTGCTTGGGAGTAGACCATTTGTGGTCTACACCGACCATGCTTCACTGCGCACCGCAGTGAAGTCGCCACACATTTCACAAAGAATGGCGAGATGGCTCTCATTCTTTGCGGAGTATAACTTCCGGGTCGAATACAAACCCGGAAGATTGAACGTGGTGGCCGACGCGTTATCACGTCGGCCGGACTATGCAGAAGCTGTTGACGTCAATGCCATTGACGCCATGCGATCGAGCA OLD KEY: CCGACGCGTTATCACGTCGGCCGGACTATGCAGAA NEW KEY: TGACGTCAATGCCATTGACGCCATGCGATCGAGCA ........ _A_ 00X0000XX0000X000X0000X0000X000X00XXX000X0X0080000000000X00X0000XX000000009 __55__ ........ _T_ X0000X000X0000XX0000000X0000X00000000000000X00X090X0XX00080090X000000000090 __55__ ........ _G_ 0X00X00000X00000X00X0000X0X000X0X000010000000200000X00XX00X00X0X00XX00X0X00 __55__ ........ _C_ 000X00X0000XX00000X0XX000X000X000X0009XX0X00X00X0X000000020010000000XX0X000 __55__ ........ _N_ 000000000000000000000000000000000000000000000000000000000000000000000000000 __55__ ........ ALL wwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwvuuttssrrqppooomki __55__ ******** *** ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^**************************************** __55__ ######## CNS TGACGTCAATGCCATTGACGCCATGCGATCGAGCAAAcCCACATCaTCtCTGTTGGAtGAtGTGAAGGCCGCGta __55__ ######## QLT XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX+XXXXXXX+XX+XXXXXXXX+XX+XXXXXXXXXXXX++ __55__ >CONSENSUS__55__ Length: 2235 [gain: 40] ATGGCGTCGAGGTGACGAAGGCGTGTCAACTCCGGGAGTTGACGCTGCAAACAGTGCGGACGGTTGCAAACGTACCGCACTGACGCAATTTGCATGCTGTCGTGCAGCCGGGCTGCACGACGAAGCGCCATGCGATCAAGCCGGGCTTGATATCGCGCGCCCGCAGACAGGGTCTGCCGGCGAAGGGACACATTACCGTGCAGCCGGGCTGCACGAAGGAAAATGCGGTCAAGCCGGGCTTGATACCGCGCGCCCGCGGACAGGGTCCGCCGGCGAACGACTGTCCACGGCCGGGCCTGGACCAGAAGAACAACTGTGCGGAGCCGGGCTCCGCACAACAAGAAGACGGCGCAAGCGGAAAACGCTGCGCAAGTCTCGGTCCGGGACCGAGACGCAACAAGAGCAGTCTGCTGGGCAGACTGCGGCGGTGACGCCGAATGTCAAGACGCTAAGCGTCTTGACGCGCACCGATACTGGATTCCAGTATCGTGACATGGAACTCGCTAGTCCTCCGACGACGGCGTCGGAGTTGACTTCGCTTCCAGCCATGAGCTGGAAGCGCTTCACGCGCGACTTGCACGATGGACGCATCGAGCAAGTCTGCGTTCTTTCGGACAGCGAAAGAACGGAGAGCGAGAGCGAAGAGCTGAGGCAGCTCTTCATGGGAAGTACCACTGAGAGTGAAGACACTCTCAGTGCGAAGACGAAGCGAGAGCGCTTCGAGGAACAAGGTTGGGACTCGCTGAAGTCGAGTCCCTATTACGAATTGTTGAGGGAGTACAAAGACGTACTCCCGGAAGAGATTCCTGCGGAGCTTCCGCAGGATAAGGGCATTCAGCACGAGATTGATCTCGTGCCGGGCACGAAGTACTGTGTCACGCGGCAGTGGCCACTGCCGCGAGAGCAAGTGAAAGCGATCGACGACTTCTTTGAAAGTCGTCGTAAAGCAGGACAAGTGCGGGAATCAAAGTCCCCGCACAGTGCTCCGACGTTCTGTGTCAAGAAGCCACAGGGCGGATGGCGCATCGTTCATGCCTACAACAAGCTGAACGATGCGACGGTACCGGCGCAGACGCCGATACCGCGAAAAGATGTTATCATCGATTCGATGGCCGGGAGCACCGTTTACAGTGCTCTCGACTTGCGAGATGGATTTTATCAAATCCTAATGCGTGAGAGCGATATCCCTCTCACGGCAGTGAGCACGCCAAGCGGCATGCTCTGGGAATGGCTAGTAATGCCACAGGGGCTTAAGAACGCCCCTGCGACTTTCAACAGGTGCGTGACGCACTTGTTGCGCTCGGTGCGCGACTTCGCACCGAGCTACTTCGATGATGTATTCATCCACAGCCGGGCTGTGGACGGGAAGACCGACGTAGAGATGCACAGGGTGCATCTCCGGAAGCTACTTGAGCTTATGCGAAAGCATAAGCTCTACGCGAACCTGAAGAAGTGTATCTTCGGGGCGAGCGAGATACCCGTCCTCGGGTGTCTCGTAGGGAAGAATGGTGTTCGCCCTGACCCGGAAAAGGTCAGAGTGATCAATGAATGGCCAACGCCTTCAAGTGTCAAGGAACTGAGGCAGTTCCTTGGCTTGGCCACGTACTTGTGCAAGTACGTGGAGGATTATGCGGGCAAGATCCGCCCGCTGTCACAGCTTCTTAAGAAAGAAGCTGTGTGGAATTGGACACCCGATTGCCAAAAGGCATTCGATGCAGTCAAGCGGGGCTTGACTGAGGCGCCGATCTTGGCAGTGGCTGACCAAGATCGCCCATTTCACGTAGTGTGTGACGCATCCGATTTCGCGATCGGATGCGCGTTGATGCAGCACGATCACGAGGGCCGTGATCGTGTCGTCTACTACCAATCGCGTCAGCTGAAGCCAGCTGAGCGCAACTATCCGGTGCATGACAAGGAACTCCTTGCCATGAAGTATGCACTCGCAAAGTTCCGAGTGTACTTGCTTGGGAGTAGACCATTTGTGGTCTACACCGACCATGCTTCACTGCGCACCGCAGTGAAGTCGCCACACATTTCACAAAGAATGGCGAGATGGCTCTCATTCTTTGCGGAGTATAACTTCCGGGTCGAATACAAACCCGGAAGATTGAACGTGGTGGCCGACGCGTTATCACGTCGGCCGGACTATGCAGAAGCTGTTGACGTCAATGCCATTGACGCCATGCGATCGAGCAAACCCACATCATCTCTGTTGGATGATGTGAAGGCCGCGTA OLD KEY: TGACGTCAATGCCATTGACGCCATGCGATCGAGCA NEW KEY: ACATCATCTCTGTTGGATGATGTGAAGGCCGCGTA ........ _A_ X0X00X0000000000X00X0000XX00000000X00000X00X00000X0000XX10000000000000X0000 __56__ ........ _T_ 000X00X0X0X0XX000X00X0X0000000000X000000000000000000000000X0XX00X0000X09000 __56__ ........ _G_ 00000000000X00XX00X00X0X00XX00X0X000X0X000X00X0XX00X0X00900000X00XX00000XX0 __56__ ........ _C_ 0X00X00X0X000000000000000000XX0X000X0X0X0X00X0X000X0X0000X0X000X000XX00000X __56__ ........ _N_ 000000000000000000000000000000000000000000000000000000000000000000000000000 __56__ ........ ALL wwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwvvvuuutttttssssrrqqqpppoomkie __56__ ******** *** ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^**************************************** __56__ ######## CNS ACATCATCTCTGTTGGATGATGTGAAGGCCGCGTACGCGCACGACGCGGACGCGAAgCTCTTGCTGGCCTAtGGC __56__ ######## QLT XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX+XXXXXXXXXXXXXX+XXX __56__ >CONSENSUS__56__ Length: 2275 [gain: 40] ATGGCGTCGAGGTGACGAAGGCGTGTCAACTCCGGGAGTTGACGCTGCAAACAGTGCGGACGGTTGCAAACGTACCGCACTGACGCAATTTGCATGCTGTCGTGCAGCCGGGCTGCACGACGAAGCGCCATGCGATCAAGCCGGGCTTGATATCGCGCGCCCGCAGACAGGGTCTGCCGGCGAAGGGACACATTACCGTGCAGCCGGGCTGCACGAAGGAAAATGCGGTCAAGCCGGGCTTGATACCGCGCGCCCGCGGACAGGGTCCGCCGGCGAACGACTGTCCACGGCCGGGCCTGGACCAGAAGAACAACTGTGCGGAGCCGGGCTCCGCACAACAAGAAGACGGCGCAAGCGGAAAACGCTGCGCAAGTCTCGGTCCGGGACCGAGACGCAACAAGAGCAGTCTGCTGGGCAGACTGCGGCGGTGACGCCGAATGTCAAGACGCTAAGCGTCTTGACGCGCACCGATACTGGATTCCAGTATCGTGACATGGAACTCGCTAGTCCTCCGACGACGGCGTCGGAGTTGACTTCGCTTCCAGCCATGAGCTGGAAGCGCTTCACGCGCGACTTGCACGATGGACGCATCGAGCAAGTCTGCGTTCTTTCGGACAGCGAAAGAACGGAGAGCGAGAGCGAAGAGCTGAGGCAGCTCTTCATGGGAAGTACCACTGAGAGTGAAGACACTCTCAGTGCGAAGACGAAGCGAGAGCGCTTCGAGGAACAAGGTTGGGACTCGCTGAAGTCGAGTCCCTATTACGAATTGTTGAGGGAGTACAAAGACGTACTCCCGGAAGAGATTCCTGCGGAGCTTCCGCAGGATAAGGGCATTCAGCACGAGATTGATCTCGTGCCGGGCACGAAGTACTGTGTCACGCGGCAGTGGCCACTGCCGCGAGAGCAAGTGAAAGCGATCGACGACTTCTTTGAAAGTCGTCGTAAAGCAGGACAAGTGCGGGAATCAAAGTCCCCGCACAGTGCTCCGACGTTCTGTGTCAAGAAGCCACAGGGCGGATGGCGCATCGTTCATGCCTACAACAAGCTGAACGATGCGACGGTACCGGCGCAGACGCCGATACCGCGAAAAGATGTTATCATCGATTCGATGGCCGGGAGCACCGTTTACAGTGCTCTCGACTTGCGAGATGGATTTTATCAAATCCTAATGCGTGAGAGCGATATCCCTCTCACGGCAGTGAGCACGCCAAGCGGCATGCTCTGGGAATGGCTAGTAATGCCACAGGGGCTTAAGAACGCCCCTGCGACTTTCAACAGGTGCGTGACGCACTTGTTGCGCTCGGTGCGCGACTTCGCACCGAGCTACTTCGATGATGTATTCATCCACAGCCGGGCTGTGGACGGGAAGACCGACGTAGAGATGCACAGGGTGCATCTCCGGAAGCTACTTGAGCTTATGCGAAAGCATAAGCTCTACGCGAACCTGAAGAAGTGTATCTTCGGGGCGAGCGAGATACCCGTCCTCGGGTGTCTCGTAGGGAAGAATGGTGTTCGCCCTGACCCGGAAAAGGTCAGAGTGATCAATGAATGGCCAACGCCTTCAAGTGTCAAGGAACTGAGGCAGTTCCTTGGCTTGGCCACGTACTTGTGCAAGTACGTGGAGGATTATGCGGGCAAGATCCGCCCGCTGTCACAGCTTCTTAAGAAAGAAGCTGTGTGGAATTGGACACCCGATTGCCAAAAGGCATTCGATGCAGTCAAGCGGGGCTTGACTGAGGCGCCGATCTTGGCAGTGGCTGACCAAGATCGCCCATTTCACGTAGTGTGTGACGCATCCGATTTCGCGATCGGATGCGCGTTGATGCAGCACGATCACGAGGGCCGTGATCGTGTCGTCTACTACCAATCGCGTCAGCTGAAGCCAGCTGAGCGCAACTATCCGGTGCATGACAAGGAACTCCTTGCCATGAAGTATGCACTCGCAAAGTTCCGAGTGTACTTGCTTGGGAGTAGACCATTTGTGGTCTACACCGACCATGCTTCACTGCGCACCGCAGTGAAGTCGCCACACATTTCACAAAGAATGGCGAGATGGCTCTCATTCTTTGCGGAGTATAACTTCCGGGTCGAATACAAACCCGGAAGATTGAACGTGGTGGCCGACGCGTTATCACGTCGGCCGGACTATGCAGAAGCTGTTGACGTCAATGCCATTGACGCCATGCGATCGAGCAAACCCACATCATCTCTGTTGGATGATGTGAAGGCCGCGTACGCGCACGACGCGGACGCGAAGCTCTTGCTGGCCTATGGC OLD KEY: ACATCATCTCTGTTGGATGATGTGAAGGCCGCGTA NEW KEY: ACGACGCGGACGCGAAGCTCTTGCTGGCCTATGGC ........ _A_ X00X00000X0000XX00000000000000X0000X0X0010000000X0XX00000000X0XX1000000XX00 __57__ ........ _T_ 000000000000000000X0XX00X0000X0X00000000000XX0X00000090100X0000001X00000000 __57__ ........ _G_ 00X00X0XX00X0X00X00000X00XX00000XX0000X09000000X0000X1000X000X00900X0000090 __57__ ........ _C_ 0X00X0X000X0X0000X0X000X000XX00000X0X00X0XX00X000X0000X9X00X00000900XXX000X __57__ ........ _N_ 000000000000000000000000000000000000000000000000000000000000000000000000000 __57__ ........ ALL wwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwvvuuttttsrrrqqqppppooomkif __57__ ******** *** ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^**************************************** __57__ ######## CNS ACGACGCGGACGCGAAGCTCTTGCTGGCCTATGGCACAGCgCCTTCTGACAAGtCcCGTCAGAAgcTGCCCAAgC __57__ ######## QLT XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX+XXXXXXXXXXXX+X+XXXXXXXX++XXXXXXX+X __57__ >CONSENSUS__57__ Length: 2315 [gain: 40] ATGGCGTCGAGGTGACGAAGGCGTGTCAACTCCGGGAGTTGACGCTGCAAACAGTGCGGACGGTTGCAAACGTACCGCACTGACGCAATTTGCATGCTGTCGTGCAGCCGGGCTGCACGACGAAGCGCCATGCGATCAAGCCGGGCTTGATATCGCGCGCCCGCAGACAGGGTCTGCCGGCGAAGGGACACATTACCGTGCAGCCGGGCTGCACGAAGGAAAATGCGGTCAAGCCGGGCTTGATACCGCGCGCCCGCGGACAGGGTCCGCCGGCGAACGACTGTCCACGGCCGGGCCTGGACCAGAAGAACAACTGTGCGGAGCCGGGCTCCGCACAACAAGAAGACGGCGCAAGCGGAAAACGCTGCGCAAGTCTCGGTCCGGGACCGAGACGCAACAAGAGCAGTCTGCTGGGCAGACTGCGGCGGTGACGCCGAATGTCAAGACGCTAAGCGTCTTGACGCGCACCGATACTGGATTCCAGTATCGTGACATGGAACTCGCTAGTCCTCCGACGACGGCGTCGGAGTTGACTTCGCTTCCAGCCATGAGCTGGAAGCGCTTCACGCGCGACTTGCACGATGGACGCATCGAGCAAGTCTGCGTTCTTTCGGACAGCGAAAGAACGGAGAGCGAGAGCGAAGAGCTGAGGCAGCTCTTCATGGGAAGTACCACTGAGAGTGAAGACACTCTCAGTGCGAAGACGAAGCGAGAGCGCTTCGAGGAACAAGGTTGGGACTCGCTGAAGTCGAGTCCCTATTACGAATTGTTGAGGGAGTACAAAGACGTACTCCCGGAAGAGATTCCTGCGGAGCTTCCGCAGGATAAGGGCATTCAGCACGAGATTGATCTCGTGCCGGGCACGAAGTACTGTGTCACGCGGCAGTGGCCACTGCCGCGAGAGCAAGTGAAAGCGATCGACGACTTCTTTGAAAGTCGTCGTAAAGCAGGACAAGTGCGGGAATCAAAGTCCCCGCACAGTGCTCCGACGTTCTGTGTCAAGAAGCCACAGGGCGGATGGCGCATCGTTCATGCCTACAACAAGCTGAACGATGCGACGGTACCGGCGCAGACGCCGATACCGCGAAAAGATGTTATCATCGATTCGATGGCCGGGAGCACCGTTTACAGTGCTCTCGACTTGCGAGATGGATTTTATCAAATCCTAATGCGTGAGAGCGATATCCCTCTCACGGCAGTGAGCACGCCAAGCGGCATGCTCTGGGAATGGCTAGTAATGCCACAGGGGCTTAAGAACGCCCCTGCGACTTTCAACAGGTGCGTGACGCACTTGTTGCGCTCGGTGCGCGACTTCGCACCGAGCTACTTCGATGATGTATTCATCCACAGCCGGGCTGTGGACGGGAAGACCGACGTAGAGATGCACAGGGTGCATCTCCGGAAGCTACTTGAGCTTATGCGAAAGCATAAGCTCTACGCGAACCTGAAGAAGTGTATCTTCGGGGCGAGCGAGATACCCGTCCTCGGGTGTCTCGTAGGGAAGAATGGTGTTCGCCCTGACCCGGAAAAGGTCAGAGTGATCAATGAATGGCCAACGCCTTCAAGTGTCAAGGAACTGAGGCAGTTCCTTGGCTTGGCCACGTACTTGTGCAAGTACGTGGAGGATTATGCGGGCAAGATCCGCCCGCTGTCACAGCTTCTTAAGAAAGAAGCTGTGTGGAATTGGACACCCGATTGCCAAAAGGCATTCGATGCAGTCAAGCGGGGCTTGACTGAGGCGCCGATCTTGGCAGTGGCTGACCAAGATCGCCCATTTCACGTAGTGTGTGACGCATCCGATTTCGCGATCGGATGCGCGTTGATGCAGCACGATCACGAGGGCCGTGATCGTGTCGTCTACTACCAATCGCGTCAGCTGAAGCCAGCTGAGCGCAACTATCCGGTGCATGACAAGGAACTCCTTGCCATGAAGTATGCACTCGCAAAGTTCCGAGTGTACTTGCTTGGGAGTAGACCATTTGTGGTCTACACCGACCATGCTTCACTGCGCACCGCAGTGAAGTCGCCACACATTTCACAAAGAATGGCGAGATGGCTCTCATTCTTTGCGGAGTATAACTTCCGGGTCGAATACAAACCCGGAAGATTGAACGTGGTGGCCGACGCGTTATCACGTCGGCCGGACTATGCAGAAGCTGTTGACGTCAATGCCATTGACGCCATGCGATCGAGCAAACCCACATCATCTCTGTTGGATGATGTGAAGGCCGCGTACGCGCACGACGCGGACGCGAAGCTCTTGCTGGCCTATGGCACAGCGCCTTCTGACAAGTCCCGTCAGAAGCTGCCCAAGC OLD KEY: ACGACGCGGACGCGAAGCTCTTGCTGGCCTATGGC NEW KEY: GCCTTCTGACAAGTCCCGTCAGAAGCTGCCCAAGC ........ _A_ 00000000X0XX00000000X0XX0000000XX00X000000900000000X0X00010100010000X00X200 __58__ ........ _T_ 000XX0X000000X0000X0000000X00000000000XX001000009000000000X9X00809000000000 __58__ ........ _G_ X000000X0000X0000X000X00X00X00000X0000000X0X0X0X0X000000X00000X1X0X000X00XX __58__ ........ _C_ 0XX00X000X0000XXX00X00000X00XXX000X0XX00X000X0X000X0X0XX09000X00000X0X00800 __58__ ........ _N_ 000000000000000000000000000000000000000000000000000000000000000000000000000 __58__ ........ ALL wwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwvvvuuutttssrrqqpppoomkjge __58__ ******** *** ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^**************************************** __58__ ######## CNS GCCTTCTGACAAGTCCCGTCAGAAGCTGCCCAAGCACCTTCGaGCGCGtGCACACCGcTtTCGtGtGCACGAcGG __58__ ######## QLT XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX+XXXXX+XXXXXXXX+X+XXX+X+XXXXXX+XX __58__ >CONSENSUS__58__ Length: 2355 [gain: 40] ATGGCGTCGAGGTGACGAAGGCGTGTCAACTCCGGGAGTTGACGCTGCAAACAGTGCGGACGGTTGCAAACGTACCGCACTGACGCAATTTGCATGCTGTCGTGCAGCCGGGCTGCACGACGAAGCGCCATGCGATCAAGCCGGGCTTGATATCGCGCGCCCGCAGACAGGGTCTGCCGGCGAAGGGACACATTACCGTGCAGCCGGGCTGCACGAAGGAAAATGCGGTCAAGCCGGGCTTGATACCGCGCGCCCGCGGACAGGGTCCGCCGGCGAACGACTGTCCACGGCCGGGCCTGGACCAGAAGAACAACTGTGCGGAGCCGGGCTCCGCACAACAAGAAGACGGCGCAAGCGGAAAACGCTGCGCAAGTCTCGGTCCGGGACCGAGACGCAACAAGAGCAGTCTGCTGGGCAGACTGCGGCGGTGACGCCGAATGTCAAGACGCTAAGCGTCTTGACGCGCACCGATACTGGATTCCAGTATCGTGACATGGAACTCGCTAGTCCTCCGACGACGGCGTCGGAGTTGACTTCGCTTCCAGCCATGAGCTGGAAGCGCTTCACGCGCGACTTGCACGATGGACGCATCGAGCAAGTCTGCGTTCTTTCGGACAGCGAAAGAACGGAGAGCGAGAGCGAAGAGCTGAGGCAGCTCTTCATGGGAAGTACCACTGAGAGTGAAGACACTCTCAGTGCGAAGACGAAGCGAGAGCGCTTCGAGGAACAAGGTTGGGACTCGCTGAAGTCGAGTCCCTATTACGAATTGTTGAGGGAGTACAAAGACGTACTCCCGGAAGAGATTCCTGCGGAGCTTCCGCAGGATAAGGGCATTCAGCACGAGATTGATCTCGTGCCGGGCACGAAGTACTGTGTCACGCGGCAGTGGCCACTGCCGCGAGAGCAAGTGAAAGCGATCGACGACTTCTTTGAAAGTCGTCGTAAAGCAGGACAAGTGCGGGAATCAAAGTCCCCGCACAGTGCTCCGACGTTCTGTGTCAAGAAGCCACAGGGCGGATGGCGCATCGTTCATGCCTACAACAAGCTGAACGATGCGACGGTACCGGCGCAGACGCCGATACCGCGAAAAGATGTTATCATCGATTCGATGGCCGGGAGCACCGTTTACAGTGCTCTCGACTTGCGAGATGGATTTTATCAAATCCTAATGCGTGAGAGCGATATCCCTCTCACGGCAGTGAGCACGCCAAGCGGCATGCTCTGGGAATGGCTAGTAATGCCACAGGGGCTTAAGAACGCCCCTGCGACTTTCAACAGGTGCGTGACGCACTTGTTGCGCTCGGTGCGCGACTTCGCACCGAGCTACTTCGATGATGTATTCATCCACAGCCGGGCTGTGGACGGGAAGACCGACGTAGAGATGCACAGGGTGCATCTCCGGAAGCTACTTGAGCTTATGCGAAAGCATAAGCTCTACGCGAACCTGAAGAAGTGTATCTTCGGGGCGAGCGAGATACCCGTCCTCGGGTGTCTCGTAGGGAAGAATGGTGTTCGCCCTGACCCGGAAAAGGTCAGAGTGATCAATGAATGGCCAACGCCTTCAAGTGTCAAGGAACTGAGGCAGTTCCTTGGCTTGGCCACGTACTTGTGCAAGTACGTGGAGGATTATGCGGGCAAGATCCGCCCGCTGTCACAGCTTCTTAAGAAAGAAGCTGTGTGGAATTGGACACCCGATTGCCAAAAGGCATTCGATGCAGTCAAGCGGGGCTTGACTGAGGCGCCGATCTTGGCAGTGGCTGACCAAGATCGCCCATTTCACGTAGTGTGTGACGCATCCGATTTCGCGATCGGATGCGCGTTGATGCAGCACGATCACGAGGGCCGTGATCGTGTCGTCTACTACCAATCGCGTCAGCTGAAGCCAGCTGAGCGCAACTATCCGGTGCATGACAAGGAACTCCTTGCCATGAAGTATGCACTCGCAAAGTTCCGAGTGTACTTGCTTGGGAGTAGACCATTTGTGGTCTACACCGACCATGCTTCACTGCGCACCGCAGTGAAGTCGCCACACATTTCACAAAGAATGGCGAGATGGCTCTCATTCTTTGCGGAGTATAACTTCCGGGTCGAATACAAACCCGGAAGATTGAACGTGGTGGCCGACGCGTTATCACGTCGGCCGGACTATGCAGAAGCTGTTGACGTCAATGCCATTGACGCCATGCGATCGAGCAAACCCACATCATCTCTGTTGGATGATGTGAAGGCCGCGTACGCGCACGACGCGGACGCGAAGCTCTTGCTGGCCTATGGCACAGCGCCTTCTGACAAGTCCCGTCAGAAGCTGCCCAAGCACCTTCGAGCGCGTGCACACCGCTTTCGTGTGCACGACGG OLD KEY: GCCTTCTGACAAGTCCCGTCAGAAGCTGCCCAAGC NEW KEY: CGAGCGCGTGCACACCGCTTTCGTGTGCACGACGG ........ _A_ 00X00000000X0X00000000000000X00X000X0060040000X0XX000X0000X00809X1101071000 __59__ ........ _T_ 00000000X000000000XXX00X0X00000000000X00X00X7X010060000X0000000000000006000 __59__ ........ _G_ 0X0X0X0X0X000000X00000X0X0X000X00XX0004006000000000X00X00X00810000708921081 __59__ ........ _C_ X000X0X000X0X0XX0X000X00000X0X00X000X00X00X030090040X000X00X1191082X1112929 __59__ ........ _N_ 000000000000000000000000000000000000000000000000000000000000000000000000000 __59__ ........ ALL wwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwvvvuuutttssrrqqqqpppooonmljfd __59__ ******** *** ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^**************************************** __59__ ######## CNS CGAGCGCGTGCACACCGCTTTCGTGTGCACGACGGACTaCTgCTtTAcAAtGCAGTCGACgacaAcgCggatcgc __59__ ######## QLT XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX!XX!XX@XX+XX!XXXXXXXXX++++X+@X++@!+++ __59__ >CONSENSUS__59__ Length: 2395 [gain: 40] ATGGCGTCGAGGTGACGAAGGCGTGTCAACTCCGGGAGTTGACGCTGCAAACAGTGCGGACGGTTGCAAACGTACCGCACTGACGCAATTTGCATGCTGTCGTGCAGCCGGGCTGCACGACGAAGCGCCATGCGATCAAGCCGGGCTTGATATCGCGCGCCCGCAGACAGGGTCTGCCGGCGAAGGGACACATTACCGTGCAGCCGGGCTGCACGAAGGAAAATGCGGTCAAGCCGGGCTTGATACCGCGCGCCCGCGGACAGGGTCCGCCGGCGAACGACTGTCCACGGCCGGGCCTGGACCAGAAGAACAACTGTGCGGAGCCGGGCTCCGCACAACAAGAAGACGGCGCAAGCGGAAAACGCTGCGCAAGTCTCGGTCCGGGACCGAGACGCAACAAGAGCAGTCTGCTGGGCAGACTGCGGCGGTGACGCCGAATGTCAAGACGCTAAGCGTCTTGACGCGCACCGATACTGGATTCCAGTATCGTGACATGGAACTCGCTAGTCCTCCGACGACGGCGTCGGAGTTGACTTCGCTTCCAGCCATGAGCTGGAAGCGCTTCACGCGCGACTTGCACGATGGACGCATCGAGCAAGTCTGCGTTCTTTCGGACAGCGAAAGAACGGAGAGCGAGAGCGAAGAGCTGAGGCAGCTCTTCATGGGAAGTACCACTGAGAGTGAAGACACTCTCAGTGCGAAGACGAAGCGAGAGCGCTTCGAGGAACAAGGTTGGGACTCGCTGAAGTCGAGTCCCTATTACGAATTGTTGAGGGAGTACAAAGACGTACTCCCGGAAGAGATTCCTGCGGAGCTTCCGCAGGATAAGGGCATTCAGCACGAGATTGATCTCGTGCCGGGCACGAAGTACTGTGTCACGCGGCAGTGGCCACTGCCGCGAGAGCAAGTGAAAGCGATCGACGACTTCTTTGAAAGTCGTCGTAAAGCAGGACAAGTGCGGGAATCAAAGTCCCCGCACAGTGCTCCGACGTTCTGTGTCAAGAAGCCACAGGGCGGATGGCGCATCGTTCATGCCTACAACAAGCTGAACGATGCGACGGTACCGGCGCAGACGCCGATACCGCGAAAAGATGTTATCATCGATTCGATGGCCGGGAGCACCGTTTACAGTGCTCTCGACTTGCGAGATGGATTTTATCAAATCCTAATGCGTGAGAGCGATATCCCTCTCACGGCAGTGAGCACGCCAAGCGGCATGCTCTGGGAATGGCTAGTAATGCCACAGGGGCTTAAGAACGCCCCTGCGACTTTCAACAGGTGCGTGACGCACTTGTTGCGCTCGGTGCGCGACTTCGCACCGAGCTACTTCGATGATGTATTCATCCACAGCCGGGCTGTGGACGGGAAGACCGACGTAGAGATGCACAGGGTGCATCTCCGGAAGCTACTTGAGCTTATGCGAAAGCATAAGCTCTACGCGAACCTGAAGAAGTGTATCTTCGGGGCGAGCGAGATACCCGTCCTCGGGTGTCTCGTAGGGAAGAATGGTGTTCGCCCTGACCCGGAAAAGGTCAGAGTGATCAATGAATGGCCAACGCCTTCAAGTGTCAAGGAACTGAGGCAGTTCCTTGGCTTGGCCACGTACTTGTGCAAGTACGTGGAGGATTATGCGGGCAAGATCCGCCCGCTGTCACAGCTTCTTAAGAAAGAAGCTGTGTGGAATTGGACACCCGATTGCCAAAAGGCATTCGATGCAGTCAAGCGGGGCTTGACTGAGGCGCCGATCTTGGCAGTGGCTGACCAAGATCGCCCATTTCACGTAGTGTGTGACGCATCCGATTTCGCGATCGGATGCGCGTTGATGCAGCACGATCACGAGGGCCGTGATCGTGTCGTCTACTACCAATCGCGTCAGCTGAAGCCAGCTGAGCGCAACTATCCGGTGCATGACAAGGAACTCCTTGCCATGAAGTATGCACTCGCAAAGTTCCGAGTGTACTTGCTTGGGAGTAGACCATTTGTGGTCTACACCGACCATGCTTCACTGCGCACCGCAGTGAAGTCGCCACACATTTCACAAAGAATGGCGAGATGGCTCTCATTCTTTGCGGAGTATAACTTCCGGGTCGAATACAAACCCGGAAGATTGAACGTGGTGGCCGACGCGTTATCACGTCGGCCGGACTATGCAGAAGCTGTTGACGTCAATGCCATTGACGCCATGCGATCGAGCAAACCCACATCATCTCTGTTGGATGATGTGAAGGCCGCGTACGCGCACGACGCGGACGCGAAGCTCTTGCTGGCCTATGGCACAGCGCCTTCTGACAAGTCCCGTCAGAAGCTGCCCAAGCACCTTCGAGCGCGTGCACACCGCTTTCGTGTGCACGACGGACTACTGCTTTACAATGCAGTCGACGACAACGCGGATCGC OLD KEY: CGAGCGCGTGCACACCGCTTTCGTGTGCACGACGG NEW KEY: TGCTTTACAATGCAGTCGACGACAACGCGGATCGC ........ _A_ 000000X0XX000X0000X00X0XX00000X0000000000001006XX00X00X00X0000009000900X00X __60__ ........ _T_ X00XXX0000X0000X000000000000000X00009X0X00X000000900100X0000900000900000X00 __60__ ........ _G_ 0X000000000X00X00X00X00000X0XX000X0X00X00X09003000X00000X0000X0X00000XX0000 __60__ ........ _C_ 00X0000X0000X000X00X00X00X0X0000X0X00000X000XX0001009X0000XX10X00X1X10000X0 __60__ ........ _N_ 000000000000000000000000000000000000000000000000000000000000000000000000000 __60__ ........ ALL qqqqqqqqqqqqqqqqqqqqqqqqqqqqqqqqqqqqqqqqqpppppppppooooooooonnmmllkkkjigfdba __60__ ******** *** ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^**************************************** __60__ ######## CNS TGCTTTACAATGCAGTCGACGACAACGCGGATCGCGtTGTCGTgCCaAAtGAcCATGACCtGCGaCtCaGGATCA __60__ ######## QLT XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX+XXXXXX+XX!XX+XX+XXXXXXX+XXX+X+X+XXXXXX __60__ >CONSENSUS__60__ Length: 2435 [gain: 40] ATGGCGTCGAGGTGACGAAGGCGTGTCAACTCCGGGAGTTGACGCTGCAAACAGTGCGGACGGTTGCAAACGTACCGCACTGACGCAATTTGCATGCTGTCGTGCAGCCGGGCTGCACGACGAAGCGCCATGCGATCAAGCCGGGCTTGATATCGCGCGCCCGCAGACAGGGTCTGCCGGCGAAGGGACACATTACCGTGCAGCCGGGCTGCACGAAGGAAAATGCGGTCAAGCCGGGCTTGATACCGCGCGCCCGCGGACAGGGTCCGCCGGCGAACGACTGTCCACGGCCGGGCCTGGACCAGAAGAACAACTGTGCGGAGCCGGGCTCCGCACAACAAGAAGACGGCGCAAGCGGAAAACGCTGCGCAAGTCTCGGTCCGGGACCGAGACGCAACAAGAGCAGTCTGCTGGGCAGACTGCGGCGGTGACGCCGAATGTCAAGACGCTAAGCGTCTTGACGCGCACCGATACTGGATTCCAGTATCGTGACATGGAACTCGCTAGTCCTCCGACGACGGCGTCGGAGTTGACTTCGCTTCCAGCCATGAGCTGGAAGCGCTTCACGCGCGACTTGCACGATGGACGCATCGAGCAAGTCTGCGTTCTTTCGGACAGCGAAAGAACGGAGAGCGAGAGCGAAGAGCTGAGGCAGCTCTTCATGGGAAGTACCACTGAGAGTGAAGACACTCTCAGTGCGAAGACGAAGCGAGAGCGCTTCGAGGAACAAGGTTGGGACTCGCTGAAGTCGAGTCCCTATTACGAATTGTTGAGGGAGTACAAAGACGTACTCCCGGAAGAGATTCCTGCGGAGCTTCCGCAGGATAAGGGCATTCAGCACGAGATTGATCTCGTGCCGGGCACGAAGTACTGTGTCACGCGGCAGTGGCCACTGCCGCGAGAGCAAGTGAAAGCGATCGACGACTTCTTTGAAAGTCGTCGTAAAGCAGGACAAGTGCGGGAATCAAAGTCCCCGCACAGTGCTCCGACGTTCTGTGTCAAGAAGCCACAGGGCGGATGGCGCATCGTTCATGCCTACAACAAGCTGAACGATGCGACGGTACCGGCGCAGACGCCGATACCGCGAAAAGATGTTATCATCGATTCGATGGCCGGGAGCACCGTTTACAGTGCTCTCGACTTGCGAGATGGATTTTATCAAATCCTAATGCGTGAGAGCGATATCCCTCTCACGGCAGTGAGCACGCCAAGCGGCATGCTCTGGGAATGGCTAGTAATGCCACAGGGGCTTAAGAACGCCCCTGCGACTTTCAACAGGTGCGTGACGCACTTGTTGCGCTCGGTGCGCGACTTCGCACCGAGCTACTTCGATGATGTATTCATCCACAGCCGGGCTGTGGACGGGAAGACCGACGTAGAGATGCACAGGGTGCATCTCCGGAAGCTACTTGAGCTTATGCGAAAGCATAAGCTCTACGCGAACCTGAAGAAGTGTATCTTCGGGGCGAGCGAGATACCCGTCCTCGGGTGTCTCGTAGGGAAGAATGGTGTTCGCCCTGACCCGGAAAAGGTCAGAGTGATCAATGAATGGCCAACGCCTTCAAGTGTCAAGGAACTGAGGCAGTTCCTTGGCTTGGCCACGTACTTGTGCAAGTACGTGGAGGATTATGCGGGCAAGATCCGCCCGCTGTCACAGCTTCTTAAGAAAGAAGCTGTGTGGAATTGGACACCCGATTGCCAAAAGGCATTCGATGCAGTCAAGCGGGGCTTGACTGAGGCGCCGATCTTGGCAGTGGCTGACCAAGATCGCCCATTTCACGTAGTGTGTGACGCATCCGATTTCGCGATCGGATGCGCGTTGATGCAGCACGATCACGAGGGCCGTGATCGTGTCGTCTACTACCAATCGCGTCAGCTGAAGCCAGCTGAGCGCAACTATCCGGTGCATGACAAGGAACTCCTTGCCATGAAGTATGCACTCGCAAAGTTCCGAGTGTACTTGCTTGGGAGTAGACCATTTGTGGTCTACACCGACCATGCTTCACTGCGCACCGCAGTGAAGTCGCCACACATTTCACAAAGAATGGCGAGATGGCTCTCATTCTTTGCGGAGTATAACTTCCGGGTCGAATACAAACCCGGAAGATTGAACGTGGTGGCCGACGCGTTATCACGTCGGCCGGACTATGCAGAAGCTGTTGACGTCAATGCCATTGACGCCATGCGATCGAGCAAACCCACATCATCTCTGTTGGATGATGTGAAGGCCGCGTACGCGCACGACGCGGACGCGAAGCTCTTGCTGGCCTATGGCACAGCGCCTTCTGACAAGTCCCGTCAGAAGCTGCCCAAGCACCTTCGAGCGCGTGCACACCGCTTTCGTGTGCACGACGGACTACTGCTTTACAATGCAGTCGACGACAACGCGGATCGCGTTGTCGTGCCAAATGACCATGACCTGCGACTCAGGATCA OLD KEY: TGCTTTACAATGCAGTCGACGACAACGCGGATCGC NEW KEY: CGTGCCAAATGACCATGACCTGCGACTCAGGATCA ........ _A_ 000000XXX00X00X00X000000X000X00X00X000X00X10X00X00X000000090000000X0X000000 __61__ ........ _T_ 00X000000X00000X0000X00000X00000X00X0X00000X0900800X00000010X00000000X0X000 __61__ ........ _G_ 0X0X000000X00000X0000X0X00000XX00000X000X09000000X00X0000X000X0XXX0000000XX __61__ ........ _C_ X000XX000000XX0000XX00X00X0X00000X00000X000001X020000XXXX00X00X0000X00X0X00 __61__ ........ _N_ 000000000000000000000000000000000000000000000000000000000000000000000000000 __61__ ........ ALL wwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwvvvuuttsssrrqqqppponif __61__ ******** *** ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^**************************************** __61__ ######## CNS CGTGCCAAATGACCATGACCTGCGACTCAGGATCATGTACGAgTAtCAtGATGCCCCGaCTGCGGGACATCTCGG __61__ ######## QLT XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX+XX+XX+XXXXXXXXX+XXXXXXXXXXXXXXXX __61__ >CONSENSUS__61__ Length: 2475 [gain: 40] ATGGCGTCGAGGTGACGAAGGCGTGTCAACTCCGGGAGTTGACGCTGCAAACAGTGCGGACGGTTGCAAACGTACCGCACTGACGCAATTTGCATGCTGTCGTGCAGCCGGGCTGCACGACGAAGCGCCATGCGATCAAGCCGGGCTTGATATCGCGCGCCCGCAGACAGGGTCTGCCGGCGAAGGGACACATTACCGTGCAGCCGGGCTGCACGAAGGAAAATGCGGTCAAGCCGGGCTTGATACCGCGCGCCCGCGGACAGGGTCCGCCGGCGAACGACTGTCCACGGCCGGGCCTGGACCAGAAGAACAACTGTGCGGAGCCGGGCTCCGCACAACAAGAAGACGGCGCAAGCGGAAAACGCTGCGCAAGTCTCGGTCCGGGACCGAGACGCAACAAGAGCAGTCTGCTGGGCAGACTGCGGCGGTGACGCCGAATGTCAAGACGCTAAGCGTCTTGACGCGCACCGATACTGGATTCCAGTATCGTGACATGGAACTCGCTAGTCCTCCGACGACGGCGTCGGAGTTGACTTCGCTTCCAGCCATGAGCTGGAAGCGCTTCACGCGCGACTTGCACGATGGACGCATCGAGCAAGTCTGCGTTCTTTCGGACAGCGAAAGAACGGAGAGCGAGAGCGAAGAGCTGAGGCAGCTCTTCATGGGAAGTACCACTGAGAGTGAAGACACTCTCAGTGCGAAGACGAAGCGAGAGCGCTTCGAGGAACAAGGTTGGGACTCGCTGAAGTCGAGTCCCTATTACGAATTGTTGAGGGAGTACAAAGACGTACTCCCGGAAGAGATTCCTGCGGAGCTTCCGCAGGATAAGGGCATTCAGCACGAGATTGATCTCGTGCCGGGCACGAAGTACTGTGTCACGCGGCAGTGGCCACTGCCGCGAGAGCAAGTGAAAGCGATCGACGACTTCTTTGAAAGTCGTCGTAAAGCAGGACAAGTGCGGGAATCAAAGTCCCCGCACAGTGCTCCGACGTTCTGTGTCAAGAAGCCACAGGGCGGATGGCGCATCGTTCATGCCTACAACAAGCTGAACGATGCGACGGTACCGGCGCAGACGCCGATACCGCGAAAAGATGTTATCATCGATTCGATGGCCGGGAGCACCGTTTACAGTGCTCTCGACTTGCGAGATGGATTTTATCAAATCCTAATGCGTGAGAGCGATATCCCTCTCACGGCAGTGAGCACGCCAAGCGGCATGCTCTGGGAATGGCTAGTAATGCCACAGGGGCTTAAGAACGCCCCTGCGACTTTCAACAGGTGCGTGACGCACTTGTTGCGCTCGGTGCGCGACTTCGCACCGAGCTACTTCGATGATGTATTCATCCACAGCCGGGCTGTGGACGGGAAGACCGACGTAGAGATGCACAGGGTGCATCTCCGGAAGCTACTTGAGCTTATGCGAAAGCATAAGCTCTACGCGAACCTGAAGAAGTGTATCTTCGGGGCGAGCGAGATACCCGTCCTCGGGTGTCTCGTAGGGAAGAATGGTGTTCGCCCTGACCCGGAAAAGGTCAGAGTGATCAATGAATGGCCAACGCCTTCAAGTGTCAAGGAACTGAGGCAGTTCCTTGGCTTGGCCACGTACTTGTGCAAGTACGTGGAGGATTATGCGGGCAAGATCCGCCCGCTGTCACAGCTTCTTAAGAAAGAAGCTGTGTGGAATTGGACACCCGATTGCCAAAAGGCATTCGATGCAGTCAAGCGGGGCTTGACTGAGGCGCCGATCTTGGCAGTGGCTGACCAAGATCGCCCATTTCACGTAGTGTGTGACGCATCCGATTTCGCGATCGGATGCGCGTTGATGCAGCACGATCACGAGGGCCGTGATCGTGTCGTCTACTACCAATCGCGTCAGCTGAAGCCAGCTGAGCGCAACTATCCGGTGCATGACAAGGAACTCCTTGCCATGAAGTATGCACTCGCAAAGTTCCGAGTGTACTTGCTTGGGAGTAGACCATTTGTGGTCTACACCGACCATGCTTCACTGCGCACCGCAGTGAAGTCGCCACACATTTCACAAAGAATGGCGAGATGGCTCTCATTCTTTGCGGAGTATAACTTCCGGGTCGAATACAAACCCGGAAGATTGAACGTGGTGGCCGACGCGTTATCACGTCGGCCGGACTATGCAGAAGCTGTTGACGTCAATGCCATTGACGCCATGCGATCGAGCAAACCCACATCATCTCTGTTGGATGATGTGAAGGCCGCGTACGCGCACGACGCGGACGCGAAGCTCTTGCTGGCCTATGGCACAGCGCCTTCTGACAAGTCCCGTCAGAAGCTGCCCAAGCACCTTCGAGCGCGTGCACACCGCTTTCGTGTGCACGACGGACTACTGCTTTACAATGCAGTCGACGACAACGCGGATCGCGTTGTCGTGCCAAATGACCATGACCTGCGACTCAGGATCATGTACGAGTATCATGATGCCCCGACTGCGGGACATCTCGG OLD KEY: CGTGCCAAATGACCATGACCTGCGACTCAGGATCA NEW KEY: GAGTATCATGATGCCCCGACTGCGGGACATCTCGG ........ _A_ 0X00X00X00X0000000X0000000X0X000000X0000X0XX0X020X0000000000X000000X00000X0 __62__ ........ _T_ 000X0X00X00X00000000X00000000X0X000000X000000007X000X00XX0X0000000000XX0X00 __62__ ........ _G_ X0X000000X00X0000X000X0XXX0000000XX00X0X0X00X000000X0000000000X0X0X00000000 __62__ ........ _C_ 000000X000000XXXX00X00X0000X00X0X000X000000000X000X00XX00X0X0X0X0900X00X00X __62__ ........ _N_ 000000000000000000000000000000000000000000000000000000000000000000000000000 __62__ ........ ALL wwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwvvuuutttsssrrrqqqpppooomkh __62__ ******** *** ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^**************************************** __62__ ######## CNS GAGTATCATGATGCCCCGACTGCGGGACATCTCGGACGTGAGAAGACtTACGTCCTTCTCACGCGcGACTTCTAC __62__ ######## QLT XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX@XXXXXXXXXXXXXXXXX+XXXXXXXXX __62__ >CONSENSUS__62__ Length: 2515 [gain: 40] ATGGCGTCGAGGTGACGAAGGCGTGTCAACTCCGGGAGTTGACGCTGCAAACAGTGCGGACGGTTGCAAACGTACCGCACTGACGCAATTTGCATGCTGTCGTGCAGCCGGGCTGCACGACGAAGCGCCATGCGATCAAGCCGGGCTTGATATCGCGCGCCCGCAGACAGGGTCTGCCGGCGAAGGGACACATTACCGTGCAGCCGGGCTGCACGAAGGAAAATGCGGTCAAGCCGGGCTTGATACCGCGCGCCCGCGGACAGGGTCCGCCGGCGAACGACTGTCCACGGCCGGGCCTGGACCAGAAGAACAACTGTGCGGAGCCGGGCTCCGCACAACAAGAAGACGGCGCAAGCGGAAAACGCTGCGCAAGTCTCGGTCCGGGACCGAGACGCAACAAGAGCAGTCTGCTGGGCAGACTGCGGCGGTGACGCCGAATGTCAAGACGCTAAGCGTCTTGACGCGCACCGATACTGGATTCCAGTATCGTGACATGGAACTCGCTAGTCCTCCGACGACGGCGTCGGAGTTGACTTCGCTTCCAGCCATGAGCTGGAAGCGCTTCACGCGCGACTTGCACGATGGACGCATCGAGCAAGTCTGCGTTCTTTCGGACAGCGAAAGAACGGAGAGCGAGAGCGAAGAGCTGAGGCAGCTCTTCATGGGAAGTACCACTGAGAGTGAAGACACTCTCAGTGCGAAGACGAAGCGAGAGCGCTTCGAGGAACAAGGTTGGGACTCGCTGAAGTCGAGTCCCTATTACGAATTGTTGAGGGAGTACAAAGACGTACTCCCGGAAGAGATTCCTGCGGAGCTTCCGCAGGATAAGGGCATTCAGCACGAGATTGATCTCGTGCCGGGCACGAAGTACTGTGTCACGCGGCAGTGGCCACTGCCGCGAGAGCAAGTGAAAGCGATCGACGACTTCTTTGAAAGTCGTCGTAAAGCAGGACAAGTGCGGGAATCAAAGTCCCCGCACAGTGCTCCGACGTTCTGTGTCAAGAAGCCACAGGGCGGATGGCGCATCGTTCATGCCTACAACAAGCTGAACGATGCGACGGTACCGGCGCAGACGCCGATACCGCGAAAAGATGTTATCATCGATTCGATGGCCGGGAGCACCGTTTACAGTGCTCTCGACTTGCGAGATGGATTTTATCAAATCCTAATGCGTGAGAGCGATATCCCTCTCACGGCAGTGAGCACGCCAAGCGGCATGCTCTGGGAATGGCTAGTAATGCCACAGGGGCTTAAGAACGCCCCTGCGACTTTCAACAGGTGCGTGACGCACTTGTTGCGCTCGGTGCGCGACTTCGCACCGAGCTACTTCGATGATGTATTCATCCACAGCCGGGCTGTGGACGGGAAGACCGACGTAGAGATGCACAGGGTGCATCTCCGGAAGCTACTTGAGCTTATGCGAAAGCATAAGCTCTACGCGAACCTGAAGAAGTGTATCTTCGGGGCGAGCGAGATACCCGTCCTCGGGTGTCTCGTAGGGAAGAATGGTGTTCGCCCTGACCCGGAAAAGGTCAGAGTGATCAATGAATGGCCAACGCCTTCAAGTGTCAAGGAACTGAGGCAGTTCCTTGGCTTGGCCACGTACTTGTGCAAGTACGTGGAGGATTATGCGGGCAAGATCCGCCCGCTGTCACAGCTTCTTAAGAAAGAAGCTGTGTGGAATTGGACACCCGATTGCCAAAAGGCATTCGATGCAGTCAAGCGGGGCTTGACTGAGGCGCCGATCTTGGCAGTGGCTGACCAAGATCGCCCATTTCACGTAGTGTGTGACGCATCCGATTTCGCGATCGGATGCGCGTTGATGCAGCACGATCACGAGGGCCGTGATCGTGTCGTCTACTACCAATCGCGTCAGCTGAAGCCAGCTGAGCGCAACTATCCGGTGCATGACAAGGAACTCCTTGCCATGAAGTATGCACTCGCAAAGTTCCGAGTGTACTTGCTTGGGAGTAGACCATTTGTGGTCTACACCGACCATGCTTCACTGCGCACCGCAGTGAAGTCGCCACACATTTCACAAAGAATGGCGAGATGGCTCTCATTCTTTGCGGAGTATAACTTCCGGGTCGAATACAAACCCGGAAGATTGAACGTGGTGGCCGACGCGTTATCACGTCGGCCGGACTATGCAGAAGCTGTTGACGTCAATGCCATTGACGCCATGCGATCGAGCAAACCCACATCATCTCTGTTGGATGATGTGAAGGCCGCGTACGCGCACGACGCGGACGCGAAGCTCTTGCTGGCCTATGGCACAGCGCCTTCTGACAAGTCCCGTCAGAAGCTGCCCAAGCACCTTCGAGCGCGTGCACACCGCTTTCGTGTGCACGACGGACTACTGCTTTACAATGCAGTCGACGACAACGCGGATCGCGTTGTCGTGCCAAATGACCATGACCTGCGACTCAGGATCATGTACGAGTATCATGATGCCCCGACTGCGGGACATCTCGGACGTGAGAAGACTTACGTCCTTCTCACGCGCGACTTCTAC OLD KEY: GAGTATCATGATGCCCCGACTGCGGGACATCTCGG NEW KEY: AGAAGACTTACGTCCTTCTCACGCGCGACTTCTAC ........ _A_ X0XX0X000X0000000000X000000X00000X00000X00X00X00X0XX0000000000XX00X0X000000 __63__ ........ _T_ 0000000XX000X00XX0X0000000000XX0X00X00000000000X0X000X000X00000009000X00090 __63__ ........ _G_ 0X00X000000X0000000000X0X0X000000000XX00000000X00000X0XXX0X0X000X0000000X0X __63__ ........ _C_ 000000X000X00XX00X0X0X0X0X00X00X00X000X0XX0XX00000000000000X0X00000X00XX000 __63__ ........ _N_ 000000000000000000000000000000000000000000000000000000000000000000000000000 __63__ ........ ALL wwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwvvvvuuutttsssrrrrqqqpppoooljh __63__ ******** *** ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^**************************************** __63__ ######## CNS AGAAGACTTACGTCCTTCTCACGCGCGACTTCTACTGGCACCACCAGTATAAGTGGGTGCGCAAGtACATCCGtG __63__ ######## QLT XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX+XXXXXXX+X __63__ >CONSENSUS__63__ Length: 2555 [gain: 40] ATGGCGTCGAGGTGACGAAGGCGTGTCAACTCCGGGAGTTGACGCTGCAAACAGTGCGGACGGTTGCAAACGTACCGCACTGACGCAATTTGCATGCTGTCGTGCAGCCGGGCTGCACGACGAAGCGCCATGCGATCAAGCCGGGCTTGATATCGCGCGCCCGCAGACAGGGTCTGCCGGCGAAGGGACACATTACCGTGCAGCCGGGCTGCACGAAGGAAAATGCGGTCAAGCCGGGCTTGATACCGCGCGCCCGCGGACAGGGTCCGCCGGCGAACGACTGTCCACGGCCGGGCCTGGACCAGAAGAACAACTGTGCGGAGCCGGGCTCCGCACAACAAGAAGACGGCGCAAGCGGAAAACGCTGCGCAAGTCTCGGTCCGGGACCGAGACGCAACAAGAGCAGTCTGCTGGGCAGACTGCGGCGGTGACGCCGAATGTCAAGACGCTAAGCGTCTTGACGCGCACCGATACTGGATTCCAGTATCGTGACATGGAACTCGCTAGTCCTCCGACGACGGCGTCGGAGTTGACTTCGCTTCCAGCCATGAGCTGGAAGCGCTTCACGCGCGACTTGCACGATGGACGCATCGAGCAAGTCTGCGTTCTTTCGGACAGCGAAAGAACGGAGAGCGAGAGCGAAGAGCTGAGGCAGCTCTTCATGGGAAGTACCACTGAGAGTGAAGACACTCTCAGTGCGAAGACGAAGCGAGAGCGCTTCGAGGAACAAGGTTGGGACTCGCTGAAGTCGAGTCCCTATTACGAATTGTTGAGGGAGTACAAAGACGTACTCCCGGAAGAGATTCCTGCGGAGCTTCCGCAGGATAAGGGCATTCAGCACGAGATTGATCTCGTGCCGGGCACGAAGTACTGTGTCACGCGGCAGTGGCCACTGCCGCGAGAGCAAGTGAAAGCGATCGACGACTTCTTTGAAAGTCGTCGTAAAGCAGGACAAGTGCGGGAATCAAAGTCCCCGCACAGTGCTCCGACGTTCTGTGTCAAGAAGCCACAGGGCGGATGGCGCATCGTTCATGCCTACAACAAGCTGAACGATGCGACGGTACCGGCGCAGACGCCGATACCGCGAAAAGATGTTATCATCGATTCGATGGCCGGGAGCACCGTTTACAGTGCTCTCGACTTGCGAGATGGATTTTATCAAATCCTAATGCGTGAGAGCGATATCCCTCTCACGGCAGTGAGCACGCCAAGCGGCATGCTCTGGGAATGGCTAGTAATGCCACAGGGGCTTAAGAACGCCCCTGCGACTTTCAACAGGTGCGTGACGCACTTGTTGCGCTCGGTGCGCGACTTCGCACCGAGCTACTTCGATGATGTATTCATCCACAGCCGGGCTGTGGACGGGAAGACCGACGTAGAGATGCACAGGGTGCATCTCCGGAAGCTACTTGAGCTTATGCGAAAGCATAAGCTCTACGCGAACCTGAAGAAGTGTATCTTCGGGGCGAGCGAGATACCCGTCCTCGGGTGTCTCGTAGGGAAGAATGGTGTTCGCCCTGACCCGGAAAAGGTCAGAGTGATCAATGAATGGCCAACGCCTTCAAGTGTCAAGGAACTGAGGCAGTTCCTTGGCTTGGCCACGTACTTGTGCAAGTACGTGGAGGATTATGCGGGCAAGATCCGCCCGCTGTCACAGCTTCTTAAGAAAGAAGCTGTGTGGAATTGGACACCCGATTGCCAAAAGGCATTCGATGCAGTCAAGCGGGGCTTGACTGAGGCGCCGATCTTGGCAGTGGCTGACCAAGATCGCCCATTTCACGTAGTGTGTGACGCATCCGATTTCGCGATCGGATGCGCGTTGATGCAGCACGATCACGAGGGCCGTGATCGTGTCGTCTACTACCAATCGCGTCAGCTGAAGCCAGCTGAGCGCAACTATCCGGTGCATGACAAGGAACTCCTTGCCATGAAGTATGCACTCGCAAAGTTCCGAGTGTACTTGCTTGGGAGTAGACCATTTGTGGTCTACACCGACCATGCTTCACTGCGCACCGCAGTGAAGTCGCCACACATTTCACAAAGAATGGCGAGATGGCTCTCATTCTTTGCGGAGTATAACTTCCGGGTCGAATACAAACCCGGAAGATTGAACGTGGTGGCCGACGCGTTATCACGTCGGCCGGACTATGCAGAAGCTGTTGACGTCAATGCCATTGACGCCATGCGATCGAGCAAACCCACATCATCTCTGTTGGATGATGTGAAGGCCGCGTACGCGCACGACGCGGACGCGAAGCTCTTGCTGGCCTATGGCACAGCGCCTTCTGACAAGTCCCGTCAGAAGCTGCCCAAGCACCTTCGAGCGCGTGCACACCGCTTTCGTGTGCACGACGGACTACTGCTTTACAATGCAGTCGACGACAACGCGGATCGCGTTGTCGTGCCAAATGACCATGACCTGCGACTCAGGATCATGTACGAGTATCATGATGCCCCGACTGCGGGACATCTCGGACGTGAGAAGACTTACGTCCTTCTCACGCGCGACTTCTACTGGCACCACCAGTATAAGTGGGTGCGCAAGTACATCCGTG OLD KEY: AGAAGACTTACGTCCTTCTCACGCGCGACTTCTAC NEW KEY: CCACCAGTATAAGTGGGTGCGCAAGTACATCCGTG ........ _A_ 00X00X00X0XX0000000000XX00X0X000000000000X000X0000XX000008XX000000000900000 __64__ ........ _T_ 0000000X0X000X000X0000000X000X000X00XX000000X0X010000000X000000X000000XX100 __64__ ........ _G_ 000000X00000X0XXX0X0X000X0000000X0X000X0X0XX000X00000X0X0200X000X0X001000X0 __64__ ........ _C_ XX0XX00000000000000X0X00000X00XX000X000X000000009X00X0X000000XX00X0XX00090X __64__ ........ _N_ 000000000000000000000000000000000000000000000000000000000000000000000000000 __64__ ........ ALL OOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOwwwwwwwwwwwwwwwwwwwvvuuttsrrqqqponkf __64__ ******** *** ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^**************************************** __64__ ######## CNS CCACCAGTATAAGTGGGTGCGCAAGTACATCCGTGCTTGCGAGGTATGcCAACGCGTaAAGCCTGCGCCaTTcGC __64__ ######## QLT XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX+XXXXXXXX+XXXXXXXXXXX+XX+XX __64__ >CONSENSUS__64__ Length: 2595 [gain: 40] ATGGCGTCGAGGTGACGAAGGCGTGTCAACTCCGGGAGTTGACGCTGCAAACAGTGCGGACGGTTGCAAACGTACCGCACTGACGCAATTTGCATGCTGTCGTGCAGCCGGGCTGCACGACGAAGCGCCATGCGATCAAGCCGGGCTTGATATCGCGCGCCCGCAGACAGGGTCTGCCGGCGAAGGGACACATTACCGTGCAGCCGGGCTGCACGAAGGAAAATGCGGTCAAGCCGGGCTTGATACCGCGCGCCCGCGGACAGGGTCCGCCGGCGAACGACTGTCCACGGCCGGGCCTGGACCAGAAGAACAACTGTGCGGAGCCGGGCTCCGCACAACAAGAAGACGGCGCAAGCGGAAAACGCTGCGCAAGTCTCGGTCCGGGACCGAGACGCAACAAGAGCAGTCTGCTGGGCAGACTGCGGCGGTGACGCCGAATGTCAAGACGCTAAGCGTCTTGACGCGCACCGATACTGGATTCCAGTATCGTGACATGGAACTCGCTAGTCCTCCGACGACGGCGTCGGAGTTGACTTCGCTTCCAGCCATGAGCTGGAAGCGCTTCACGCGCGACTTGCACGATGGACGCATCGAGCAAGTCTGCGTTCTTTCGGACAGCGAAAGAACGGAGAGCGAGAGCGAAGAGCTGAGGCAGCTCTTCATGGGAAGTACCACTGAGAGTGAAGACACTCTCAGTGCGAAGACGAAGCGAGAGCGCTTCGAGGAACAAGGTTGGGACTCGCTGAAGTCGAGTCCCTATTACGAATTGTTGAGGGAGTACAAAGACGTACTCCCGGAAGAGATTCCTGCGGAGCTTCCGCAGGATAAGGGCATTCAGCACGAGATTGATCTCGTGCCGGGCACGAAGTACTGTGTCACGCGGCAGTGGCCACTGCCGCGAGAGCAAGTGAAAGCGATCGACGACTTCTTTGAAAGTCGTCGTAAAGCAGGACAAGTGCGGGAATCAAAGTCCCCGCACAGTGCTCCGACGTTCTGTGTCAAGAAGCCACAGGGCGGATGGCGCATCGTTCATGCCTACAACAAGCTGAACGATGCGACGGTACCGGCGCAGACGCCGATACCGCGAAAAGATGTTATCATCGATTCGATGGCCGGGAGCACCGTTTACAGTGCTCTCGACTTGCGAGATGGATTTTATCAAATCCTAATGCGTGAGAGCGATATCCCTCTCACGGCAGTGAGCACGCCAAGCGGCATGCTCTGGGAATGGCTAGTAATGCCACAGGGGCTTAAGAACGCCCCTGCGACTTTCAACAGGTGCGTGACGCACTTGTTGCGCTCGGTGCGCGACTTCGCACCGAGCTACTTCGATGATGTATTCATCCACAGCCGGGCTGTGGACGGGAAGACCGACGTAGAGATGCACAGGGTGCATCTCCGGAAGCTACTTGAGCTTATGCGAAAGCATAAGCTCTACGCGAACCTGAAGAAGTGTATCTTCGGGGCGAGCGAGATACCCGTCCTCGGGTGTCTCGTAGGGAAGAATGGTGTTCGCCCTGACCCGGAAAAGGTCAGAGTGATCAATGAATGGCCAACGCCTTCAAGTGTCAAGGAACTGAGGCAGTTCCTTGGCTTGGCCACGTACTTGTGCAAGTACGTGGAGGATTATGCGGGCAAGATCCGCCCGCTGTCACAGCTTCTTAAGAAAGAAGCTGTGTGGAATTGGACACCCGATTGCCAAAAGGCATTCGATGCAGTCAAGCGGGGCTTGACTGAGGCGCCGATCTTGGCAGTGGCTGACCAAGATCGCCCATTTCACGTAGTGTGTGACGCATCCGATTTCGCGATCGGATGCGCGTTGATGCAGCACGATCACGAGGGCCGTGATCGTGTCGTCTACTACCAATCGCGTCAGCTGAAGCCAGCTGAGCGCAACTATCCGGTGCATGACAAGGAACTCCTTGCCATGAAGTATGCACTCGCAAAGTTCCGAGTGTACTTGCTTGGGAGTAGACCATTTGTGGTCTACACCGACCATGCTTCACTGCGCACCGCAGTGAAGTCGCCACACATTTCACAAAGAATGGCGAGATGGCTCTCATTCTTTGCGGAGTATAACTTCCGGGTCGAATACAAACCCGGAAGATTGAACGTGGTGGCCGACGCGTTATCACGTCGGCCGGACTATGCAGAAGCTGTTGACGTCAATGCCATTGACGCCATGCGATCGAGCAAACCCACATCATCTCTGTTGGATGATGTGAAGGCCGCGTACGCGCACGACGCGGACGCGAAGCTCTTGCTGGCCTATGGCACAGCGCCTTCTGACAAGTCCCGTCAGAAGCTGCCCAAGCACCTTCGAGCGCGTGCACACCGCTTTCGTGTGCACGACGGACTACTGCTTTACAATGCAGTCGACGACAACGCGGATCGCGTTGTCGTGCCAAATGACCATGACCTGCGACTCAGGATCATGTACGAGTATCATGATGCCCCGACTGCGGGACATCTCGGACGTGAGAAGACTTACGTCCTTCTCACGCGCGACTTCTACTGGCACCACCAGTATAAGTGGGTGCGCAAGTACATCCGTGCTTGCGAGGTATGCCAACGCGTAAAGCCTGCGCCATTCGC OLD KEY: CCACCAGTATAAGTGGGTGCGCAAGTACATCCGTG NEW KEY: GAGGTATGCCAACGCGTAAAGCCTGCGCCATTCGC ........ _A_ 0X000X0000XX00000XXX000000000X0000000X00000050040XX00X00X000900000000090000 __65__ ........ _T_ 0000X0X000000000X000000X000000XX000000000X0025X0000X000X0000009000900000909 __65__ ........ _G_ X0XX000X00000X0X0000X000X0X000000X0X00XX0000200600000000000X00000X00XX0X0X0 __65__ ........ _C_ 00000000XX00X0X000000XX00X0XX000X0X0X000X0XX0500X000X0X00XX00X0XX00X0000001 __65__ ........ _N_ 000000000000000000000000000000000000000000000000000000000000000000000000000 __65__ ........ ALL wwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwvvvuuttssrrqpppoooomlji __65__ ******** *** ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^**************************************** __65__ ######## CNS GAGGTATGCCAACGCGTAAAGCCTGCGCCATTCGCGCAGGCTCCacTgCAATCACTACCGaCtCCGtCGGaGtGt __65__ ######## QLT XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX??X!XXXXXXXXXXXX+X+XXX+XXX+X+X+ __65__ >CONSENSUS__65__ Length: 2604 [gain: 9] ATGGCGTCGAGGTGACGAAGGCGTGTCAACTCCGGGAGTTGACGCTGCAAACAGTGCGGACGGTTGCAAACGTACCGCACTGACGCAATTTGCATGCTGTCGTGCAGCCGGGCTGCACGACGAAGCGCCATGCGATCAAGCCGGGCTTGATATCGCGCGCCCGCAGACAGGGTCTGCCGGCGAAGGGACACATTACCGTGCAGCCGGGCTGCACGAAGGAAAATGCGGTCAAGCCGGGCTTGATACCGCGCGCCCGCGGACAGGGTCCGCCGGCGAACGACTGTCCACGGCCGGGCCTGGACCAGAAGAACAACTGTGCGGAGCCGGGCTCCGCACAACAAGAAGACGGCGCAAGCGGAAAACGCTGCGCAAGTCTCGGTCCGGGACCGAGACGCAACAAGAGCAGTCTGCTGGGCAGACTGCGGCGGTGACGCCGAATGTCAAGACGCTAAGCGTCTTGACGCGCACCGATACTGGATTCCAGTATCGTGACATGGAACTCGCTAGTCCTCCGACGACGGCGTCGGAGTTGACTTCGCTTCCAGCCATGAGCTGGAAGCGCTTCACGCGCGACTTGCACGATGGACGCATCGAGCAAGTCTGCGTTCTTTCGGACAGCGAAAGAACGGAGAGCGAGAGCGAAGAGCTGAGGCAGCTCTTCATGGGAAGTACCACTGAGAGTGAAGACACTCTCAGTGCGAAGACGAAGCGAGAGCGCTTCGAGGAACAAGGTTGGGACTCGCTGAAGTCGAGTCCCTATTACGAATTGTTGAGGGAGTACAAAGACGTACTCCCGGAAGAGATTCCTGCGGAGCTTCCGCAGGATAAGGGCATTCAGCACGAGATTGATCTCGTGCCGGGCACGAAGTACTGTGTCACGCGGCAGTGGCCACTGCCGCGAGAGCAAGTGAAAGCGATCGACGACTTCTTTGAAAGTCGTCGTAAAGCAGGACAAGTGCGGGAATCAAAGTCCCCGCACAGTGCTCCGACGTTCTGTGTCAAGAAGCCACAGGGCGGATGGCGCATCGTTCATGCCTACAACAAGCTGAACGATGCGACGGTACCGGCGCAGACGCCGATACCGCGAAAAGATGTTATCATCGATTCGATGGCCGGGAGCACCGTTTACAGTGCTCTCGACTTGCGAGATGGATTTTATCAAATCCTAATGCGTGAGAGCGATATCCCTCTCACGGCAGTGAGCACGCCAAGCGGCATGCTCTGGGAATGGCTAGTAATGCCACAGGGGCTTAAGAACGCCCCTGCGACTTTCAACAGGTGCGTGACGCACTTGTTGCGCTCGGTGCGCGACTTCGCACCGAGCTACTTCGATGATGTATTCATCCACAGCCGGGCTGTGGACGGGAAGACCGACGTAGAGATGCACAGGGTGCATCTCCGGAAGCTACTTGAGCTTATGCGAAAGCATAAGCTCTACGCGAACCTGAAGAAGTGTATCTTCGGGGCGAGCGAGATACCCGTCCTCGGGTGTCTCGTAGGGAAGAATGGTGTTCGCCCTGACCCGGAAAAGGTCAGAGTGATCAATGAATGGCCAACGCCTTCAAGTGTCAAGGAACTGAGGCAGTTCCTTGGCTTGGCCACGTACTTGTGCAAGTACGTGGAGGATTATGCGGGCAAGATCCGCCCGCTGTCACAGCTTCTTAAGAAAGAAGCTGTGTGGAATTGGACACCCGATTGCCAAAAGGCATTCGATGCAGTCAAGCGGGGCTTGACTGAGGCGCCGATCTTGGCAGTGGCTGACCAAGATCGCCCATTTCACGTAGTGTGTGACGCATCCGATTTCGCGATCGGATGCGCGTTGATGCAGCACGATCACGAGGGCCGTGATCGTGTCGTCTACTACCAATCGCGTCAGCTGAAGCCAGCTGAGCGCAACTATCCGGTGCATGACAAGGAACTCCTTGCCATGAAGTATGCACTCGCAAAGTTCCGAGTGTACTTGCTTGGGAGTAGACCATTTGTGGTCTACACCGACCATGCTTCACTGCGCACCGCAGTGAAGTCGCCACACATTTCACAAAGAATGGCGAGATGGCTCTCATTCTTTGCGGAGTATAACTTCCGGGTCGAATACAAACCCGGAAGATTGAACGTGGTGGCCGACGCGTTATCACGTCGGCCGGACTATGCAGAAGCTGTTGACGTCAATGCCATTGACGCCATGCGATCGAGCAAACCCACATCATCTCTGTTGGATGATGTGAAGGCCGCGTACGCGCACGACGCGGACGCGAAGCTCTTGCTGGCCTATGGCACAGCGCCTTCTGACAAGTCCCGTCAGAAGCTGCCCAAGCACCTTCGAGCGCGTGCACACCGCTTTCGTGTGCACGACGGACTACTGCTTTACAATGCAGTCGACGACAACGCGGATCGCGTTGTCGTGCCAAATGACCATGACCTGCGACTCAGGATCATGTACGAGTATCATGATGCCCCGACTGCGGGACATCTCGGACGTGAGAAGACTTACGTCCTTCTCACGCGCGACTTCTACTGGCACCACCAGTATAAGTGGGTGCGCAAGTACATCCGTGCTTGCGAGGTATGCCAACGCGTAAAGCCTGCGCCATTCGCGCAGGCTCC OLD KEY: GAGGTATGCCAACGCGTAAAGCCTGCGCCATTCGC NEW KEY: CAACGCGTAAAGCCTGCGCCATTCGCGCAGGCTCC ........ _A_ 0XX00000XXX000000000X0000000X00000060040XX00X00X000X000000000X0000000XX0000 __66__ ........ _T_ 0000000X000000X000000XX000000000X0025X0000X000X000000X000X00000909X00000900 __66__ ........ _G_ 0000X0X0000X000X0X000000X0X00XX0000200600000000000X00000X00XX0X0X00XX00X000 __66__ ........ _C_ X00X0X000000XX00X0XX000X0X0X000X0XX0500X000X0X00XX00X0XX00X00000000000000XX __66__ ........ _N_ 000000000000000000000000000000000000000000000000000000000000000000000000000 __66__ ........ ALL wwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwvvuutttsssrrrqppoomki __66__ ******** *** ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^**************************************** __66__ ######## CNS CAACGCGTAAAGCCTGCGCCATTCGCGCAGGCTCCacTgCAATCACTACCGACTCCGTCGGAGtGtTGGAAGtCC __66__ ######## QLT XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX!?X!XXXXXXXXXXXXXXXXXXXXXXXX+X+XXXXXX+XX __66__ >CONSENSUS__66__ Length: 2644 [gain: 40] ATGGCGTCGAGGTGACGAAGGCGTGTCAACTCCGGGAGTTGACGCTGCAAACAGTGCGGACGGTTGCAAACGTACCGCACTGACGCAATTTGCATGCTGTCGTGCAGCCGGGCTGCACGACGAAGCGCCATGCGATCAAGCCGGGCTTGATATCGCGCGCCCGCAGACAGGGTCTGCCGGCGAAGGGACACATTACCGTGCAGCCGGGCTGCACGAAGGAAAATGCGGTCAAGCCGGGCTTGATACCGCGCGCCCGCGGACAGGGTCCGCCGGCGAACGACTGTCCACGGCCGGGCCTGGACCAGAAGAACAACTGTGCGGAGCCGGGCTCCGCACAACAAGAAGACGGCGCAAGCGGAAAACGCTGCGCAAGTCTCGGTCCGGGACCGAGACGCAACAAGAGCAGTCTGCTGGGCAGACTGCGGCGGTGACGCCGAATGTCAAGACGCTAAGCGTCTTGACGCGCACCGATACTGGATTCCAGTATCGTGACATGGAACTCGCTAGTCCTCCGACGACGGCGTCGGAGTTGACTTCGCTTCCAGCCATGAGCTGGAAGCGCTTCACGCGCGACTTGCACGATGGACGCATCGAGCAAGTCTGCGTTCTTTCGGACAGCGAAAGAACGGAGAGCGAGAGCGAAGAGCTGAGGCAGCTCTTCATGGGAAGTACCACTGAGAGTGAAGACACTCTCAGTGCGAAGACGAAGCGAGAGCGCTTCGAGGAACAAGGTTGGGACTCGCTGAAGTCGAGTCCCTATTACGAATTGTTGAGGGAGTACAAAGACGTACTCCCGGAAGAGATTCCTGCGGAGCTTCCGCAGGATAAGGGCATTCAGCACGAGATTGATCTCGTGCCGGGCACGAAGTACTGTGTCACGCGGCAGTGGCCACTGCCGCGAGAGCAAGTGAAAGCGATCGACGACTTCTTTGAAAGTCGTCGTAAAGCAGGACAAGTGCGGGAATCAAAGTCCCCGCACAGTGCTCCGACGTTCTGTGTCAAGAAGCCACAGGGCGGATGGCGCATCGTTCATGCCTACAACAAGCTGAACGATGCGACGGTACCGGCGCAGACGCCGATACCGCGAAAAGATGTTATCATCGATTCGATGGCCGGGAGCACCGTTTACAGTGCTCTCGACTTGCGAGATGGATTTTATCAAATCCTAATGCGTGAGAGCGATATCCCTCTCACGGCAGTGAGCACGCCAAGCGGCATGCTCTGGGAATGGCTAGTAATGCCACAGGGGCTTAAGAACGCCCCTGCGACTTTCAACAGGTGCGTGACGCACTTGTTGCGCTCGGTGCGCGACTTCGCACCGAGCTACTTCGATGATGTATTCATCCACAGCCGGGCTGTGGACGGGAAGACCGACGTAGAGATGCACAGGGTGCATCTCCGGAAGCTACTTGAGCTTATGCGAAAGCATAAGCTCTACGCGAACCTGAAGAAGTGTATCTTCGGGGCGAGCGAGATACCCGTCCTCGGGTGTCTCGTAGGGAAGAATGGTGTTCGCCCTGACCCGGAAAAGGTCAGAGTGATCAATGAATGGCCAACGCCTTCAAGTGTCAAGGAACTGAGGCAGTTCCTTGGCTTGGCCACGTACTTGTGCAAGTACGTGGAGGATTATGCGGGCAAGATCCGCCCGCTGTCACAGCTTCTTAAGAAAGAAGCTGTGTGGAATTGGACACCCGATTGCCAAAAGGCATTCGATGCAGTCAAGCGGGGCTTGACTGAGGCGCCGATCTTGGCAGTGGCTGACCAAGATCGCCCATTTCACGTAGTGTGTGACGCATCCGATTTCGCGATCGGATGCGCGTTGATGCAGCACGATCACGAGGGCCGTGATCGTGTCGTCTACTACCAATCGCGTCAGCTGAAGCCAGCTGAGCGCAACTATCCGGTGCATGACAAGGAACTCCTTGCCATGAAGTATGCACTCGCAAAGTTCCGAGTGTACTTGCTTGGGAGTAGACCATTTGTGGTCTACACCGACCATGCTTCACTGCGCACCGCAGTGAAGTCGCCACACATTTCACAAAGAATGGCGAGATGGCTCTCATTCTTTGCGGAGTATAACTTCCGGGTCGAATACAAACCCGGAAGATTGAACGTGGTGGCCGACGCGTTATCACGTCGGCCGGACTATGCAGAAGCTGTTGACGTCAATGCCATTGACGCCATGCGATCGAGCAAACCCACATCATCTCTGTTGGATGATGTGAAGGCCGCGTACGCGCACGACGCGGACGCGAAGCTCTTGCTGGCCTATGGCACAGCGCCTTCTGACAAGTCCCGTCAGAAGCTGCCCAAGCACCTTCGAGCGCGTGCACACCGCTTTCGTGTGCACGACGGACTACTGCTTTACAATGCAGTCGACGACAACGCGGATCGCGTTGTCGTGCCAAATGACCATGACCTGCGACTCAGGATCATGTACGAGTATCATGATGCCCCGACTGCGGGACATCTCGGACGTGAGAAGACTTACGTCCTTCTCACGCGCGACTTCTACTGGCACCACCAGTATAAGTGGGTGCGCAAGTACATCCGTGCTTGCGAGGTATGCCAACGCGTAAAGCCTGCGCCATTCGCGCAGGCTCCACTGCAATCACTACCGACTCCGTCGGAGTGTTGGAAGTCC OLD KEY: CAACGCGTAAAGCCTGCGCCATTCGCGCAGGCTCC NEW KEY: AATCACTACCGACTCCGTCGGAGTGTTGGAAGTCC ........ _A_ XX00X00X000X000000000X0000000XX0000X000010000X0000X000000000000000000X0X000 __67__ ........ _T_ 00X000X000000X000X00000X0XX00000X000X0X09XX0000XX00X0XXX00X0XX0000000040000 __67__ ........ _G_ 0000000000X00000X00XX0X0X00XX00X00000X00000XX00000000000XX000000000XX000X0X __67__ ........ _C_ 000X0X00XX00X0XX00X00000000000000XX0000X000000X00X00X000000X00XXXXX000600X0 __67__ ........ _N_ 000000000000000000000000000000000000000000000000000000000000000000000000000 __67__ ........ ALL PPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPOOOOOOOOOOOOOwwwwwwwwwwwwvutsrrqpoom __67__ ******** *** ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^**************************************** __67__ ######## CNS AATCACTACCGACTCCGTCGGAGTGTTGGAAGTCCATGTCtTTGGACTTCATCTTTGGTCTTCCCCCGGAcAGCG __67__ ######## QLT XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX+XXXXXXXXXXXXXXXXXXXXXXXXXXXXX!XXXX __67__ >CONSENSUS__67__ Length: 2684 [gain: 40] ATGGCGTCGAGGTGACGAAGGCGTGTCAACTCCGGGAGTTGACGCTGCAAACAGTGCGGACGGTTGCAAACGTACCGCACTGACGCAATTTGCATGCTGTCGTGCAGCCGGGCTGCACGACGAAGCGCCATGCGATCAAGCCGGGCTTGATATCGCGCGCCCGCAGACAGGGTCTGCCGGCGAAGGGACACATTACCGTGCAGCCGGGCTGCACGAAGGAAAATGCGGTCAAGCCGGGCTTGATACCGCGCGCCCGCGGACAGGGTCCGCCGGCGAACGACTGTCCACGGCCGGGCCTGGACCAGAAGAACAACTGTGCGGAGCCGGGCTCCGCACAACAAGAAGACGGCGCAAGCGGAAAACGCTGCGCAAGTCTCGGTCCGGGACCGAGACGCAACAAGAGCAGTCTGCTGGGCAGACTGCGGCGGTGACGCCGAATGTCAAGACGCTAAGCGTCTTGACGCGCACCGATACTGGATTCCAGTATCGTGACATGGAACTCGCTAGTCCTCCGACGACGGCGTCGGAGTTGACTTCGCTTCCAGCCATGAGCTGGAAGCGCTTCACGCGCGACTTGCACGATGGACGCATCGAGCAAGTCTGCGTTCTTTCGGACAGCGAAAGAACGGAGAGCGAGAGCGAAGAGCTGAGGCAGCTCTTCATGGGAAGTACCACTGAGAGTGAAGACACTCTCAGTGCGAAGACGAAGCGAGAGCGCTTCGAGGAACAAGGTTGGGACTCGCTGAAGTCGAGTCCCTATTACGAATTGTTGAGGGAGTACAAAGACGTACTCCCGGAAGAGATTCCTGCGGAGCTTCCGCAGGATAAGGGCATTCAGCACGAGATTGATCTCGTGCCGGGCACGAAGTACTGTGTCACGCGGCAGTGGCCACTGCCGCGAGAGCAAGTGAAAGCGATCGACGACTTCTTTGAAAGTCGTCGTAAAGCAGGACAAGTGCGGGAATCAAAGTCCCCGCACAGTGCTCCGACGTTCTGTGTCAAGAAGCCACAGGGCGGATGGCGCATCGTTCATGCCTACAACAAGCTGAACGATGCGACGGTACCGGCGCAGACGCCGATACCGCGAAAAGATGTTATCATCGATTCGATGGCCGGGAGCACCGTTTACAGTGCTCTCGACTTGCGAGATGGATTTTATCAAATCCTAATGCGTGAGAGCGATATCCCTCTCACGGCAGTGAGCACGCCAAGCGGCATGCTCTGGGAATGGCTAGTAATGCCACAGGGGCTTAAGAACGCCCCTGCGACTTTCAACAGGTGCGTGACGCACTTGTTGCGCTCGGTGCGCGACTTCGCACCGAGCTACTTCGATGATGTATTCATCCACAGCCGGGCTGTGGACGGGAAGACCGACGTAGAGATGCACAGGGTGCATCTCCGGAAGCTACTTGAGCTTATGCGAAAGCATAAGCTCTACGCGAACCTGAAGAAGTGTATCTTCGGGGCGAGCGAGATACCCGTCCTCGGGTGTCTCGTAGGGAAGAATGGTGTTCGCCCTGACCCGGAAAAGGTCAGAGTGATCAATGAATGGCCAACGCCTTCAAGTGTCAAGGAACTGAGGCAGTTCCTTGGCTTGGCCACGTACTTGTGCAAGTACGTGGAGGATTATGCGGGCAAGATCCGCCCGCTGTCACAGCTTCTTAAGAAAGAAGCTGTGTGGAATTGGACACCCGATTGCCAAAAGGCATTCGATGCAGTCAAGCGGGGCTTGACTGAGGCGCCGATCTTGGCAGTGGCTGACCAAGATCGCCCATTTCACGTAGTGTGTGACGCATCCGATTTCGCGATCGGATGCGCGTTGATGCAGCACGATCACGAGGGCCGTGATCGTGTCGTCTACTACCAATCGCGTCAGCTGAAGCCAGCTGAGCGCAACTATCCGGTGCATGACAAGGAACTCCTTGCCATGAAGTATGCACTCGCAAAGTTCCGAGTGTACTTGCTTGGGAGTAGACCATTTGTGGTCTACACCGACCATGCTTCACTGCGCACCGCAGTGAAGTCGCCACACATTTCACAAAGAATGGCGAGATGGCTCTCATTCTTTGCGGAGTATAACTTCCGGGTCGAATACAAACCCGGAAGATTGAACGTGGTGGCCGACGCGTTATCACGTCGGCCGGACTATGCAGAAGCTGTTGACGTCAATGCCATTGACGCCATGCGATCGAGCAAACCCACATCATCTCTGTTGGATGATGTGAAGGCCGCGTACGCGCACGACGCGGACGCGAAGCTCTTGCTGGCCTATGGCACAGCGCCTTCTGACAAGTCCCGTCAGAAGCTGCCCAAGCACCTTCGAGCGCGTGCACACCGCTTTCGTGTGCACGACGGACTACTGCTTTACAATGCAGTCGACGACAACGCGGATCGCGTTGTCGTGCCAAATGACCATGACCTGCGACTCAGGATCATGTACGAGTATCATGATGCCCCGACTGCGGGACATCTCGGACGTGAGAAGACTTACGTCCTTCTCACGCGCGACTTCTACTGGCACCACCAGTATAAGTGGGTGCGCAAGTACATCCGTGCTTGCGAGGTATGCCAACGCGTAAAGCCTGCGCCATTCGCGCAGGCTCCACTGCAATCACTACCGACTCCGTCGGAGTGTTGGAAGTCCATGTCTTTGGACTTCATCTTTGGTCTTCCCCCGGACAGCG OLD KEY: AATCACTACCGACTCCGTCGGAGTGTTGGAAGTCC NEW KEY: TTTGGACTTCATCTTTGGTCTTCCCCCGGACAGCG ........ _A_ 00000X0000X000000000000000000X0X0000X000XX0X000000000000000000040X0000000X0 __68__ ........ _T_ XXX0000XX00X0XXX00X0XX00000000000000000000600000X0XX0X00X0XX40X0000004XX000 __68__ ........ _G_ 000XX00000000000XX000000000XX000X0XX0XXX000000XX0X00X0XX00000X00X000X00000X __68__ ........ _C_ 000000X00X00X000000X00XXXXX000X00X0000000040XX00000000000X00600600XX0600X00 __68__ ........ _N_ 000000000000000000000000000000000000000000000000000000000000000000000000000 __68__ ........ ALL wwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwvvvuuutttsrrqqqpppoooljf __68__ ******** *** ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^**************************************** __68__ ######## CNS TTTGGACTTCATCTTTGGTCTTCCCCCGGACAGCGGAGGGAAtACCGGTGTTGTGGTCTTcGTcGACCGcTTCAG __68__ ######## QLT XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX!XXXXXXXXXXXXXXXXX!XX!XXXXX!XXXXX __68__ >CONSENSUS__68__ Length: 2724 [gain: 40] ATGGCGTCGAGGTGACGAAGGCGTGTCAACTCCGGGAGTTGACGCTGCAAACAGTGCGGACGGTTGCAAACGTACCGCACTGACGCAATTTGCATGCTGTCGTGCAGCCGGGCTGCACGACGAAGCGCCATGCGATCAAGCCGGGCTTGATATCGCGCGCCCGCAGACAGGGTCTGCCGGCGAAGGGACACATTACCGTGCAGCCGGGCTGCACGAAGGAAAATGCGGTCAAGCCGGGCTTGATACCGCGCGCCCGCGGACAGGGTCCGCCGGCGAACGACTGTCCACGGCCGGGCCTGGACCAGAAGAACAACTGTGCGGAGCCGGGCTCCGCACAACAAGAAGACGGCGCAAGCGGAAAACGCTGCGCAAGTCTCGGTCCGGGACCGAGACGCAACAAGAGCAGTCTGCTGGGCAGACTGCGGCGGTGACGCCGAATGTCAAGACGCTAAGCGTCTTGACGCGCACCGATACTGGATTCCAGTATCGTGACATGGAACTCGCTAGTCCTCCGACGACGGCGTCGGAGTTGACTTCGCTTCCAGCCATGAGCTGGAAGCGCTTCACGCGCGACTTGCACGATGGACGCATCGAGCAAGTCTGCGTTCTTTCGGACAGCGAAAGAACGGAGAGCGAGAGCGAAGAGCTGAGGCAGCTCTTCATGGGAAGTACCACTGAGAGTGAAGACACTCTCAGTGCGAAGACGAAGCGAGAGCGCTTCGAGGAACAAGGTTGGGACTCGCTGAAGTCGAGTCCCTATTACGAATTGTTGAGGGAGTACAAAGACGTACTCCCGGAAGAGATTCCTGCGGAGCTTCCGCAGGATAAGGGCATTCAGCACGAGATTGATCTCGTGCCGGGCACGAAGTACTGTGTCACGCGGCAGTGGCCACTGCCGCGAGAGCAAGTGAAAGCGATCGACGACTTCTTTGAAAGTCGTCGTAAAGCAGGACAAGTGCGGGAATCAAAGTCCCCGCACAGTGCTCCGACGTTCTGTGTCAAGAAGCCACAGGGCGGATGGCGCATCGTTCATGCCTACAACAAGCTGAACGATGCGACGGTACCGGCGCAGACGCCGATACCGCGAAAAGATGTTATCATCGATTCGATGGCCGGGAGCACCGTTTACAGTGCTCTCGACTTGCGAGATGGATTTTATCAAATCCTAATGCGTGAGAGCGATATCCCTCTCACGGCAGTGAGCACGCCAAGCGGCATGCTCTGGGAATGGCTAGTAATGCCACAGGGGCTTAAGAACGCCCCTGCGACTTTCAACAGGTGCGTGACGCACTTGTTGCGCTCGGTGCGCGACTTCGCACCGAGCTACTTCGATGATGTATTCATCCACAGCCGGGCTGTGGACGGGAAGACCGACGTAGAGATGCACAGGGTGCATCTCCGGAAGCTACTTGAGCTTATGCGAAAGCATAAGCTCTACGCGAACCTGAAGAAGTGTATCTTCGGGGCGAGCGAGATACCCGTCCTCGGGTGTCTCGTAGGGAAGAATGGTGTTCGCCCTGACCCGGAAAAGGTCAGAGTGATCAATGAATGGCCAACGCCTTCAAGTGTCAAGGAACTGAGGCAGTTCCTTGGCTTGGCCACGTACTTGTGCAAGTACGTGGAGGATTATGCGGGCAAGATCCGCCCGCTGTCACAGCTTCTTAAGAAAGAAGCTGTGTGGAATTGGACACCCGATTGCCAAAAGGCATTCGATGCAGTCAAGCGGGGCTTGACTGAGGCGCCGATCTTGGCAGTGGCTGACCAAGATCGCCCATTTCACGTAGTGTGTGACGCATCCGATTTCGCGATCGGATGCGCGTTGATGCAGCACGATCACGAGGGCCGTGATCGTGTCGTCTACTACCAATCGCGTCAGCTGAAGCCAGCTGAGCGCAACTATCCGGTGCATGACAAGGAACTCCTTGCCATGAAGTATGCACTCGCAAAGTTCCGAGTGTACTTGCTTGGGAGTAGACCATTTGTGGTCTACACCGACCATGCTTCACTGCGCACCGCAGTGAAGTCGCCACACATTTCACAAAGAATGGCGAGATGGCTCTCATTCTTTGCGGAGTATAACTTCCGGGTCGAATACAAACCCGGAAGATTGAACGTGGTGGCCGACGCGTTATCACGTCGGCCGGACTATGCAGAAGCTGTTGACGTCAATGCCATTGACGCCATGCGATCGAGCAAACCCACATCATCTCTGTTGGATGATGTGAAGGCCGCGTACGCGCACGACGCGGACGCGAAGCTCTTGCTGGCCTATGGCACAGCGCCTTCTGACAAGTCCCGTCAGAAGCTGCCCAAGCACCTTCGAGCGCGTGCACACCGCTTTCGTGTGCACGACGGACTACTGCTTTACAATGCAGTCGACGACAACGCGGATCGCGTTGTCGTGCCAAATGACCATGACCTGCGACTCAGGATCATGTACGAGTATCATGATGCCCCGACTGCGGGACATCTCGGACGTGAGAAGACTTACGTCCTTCTCACGCGCGACTTCTACTGGCACCACCAGTATAAGTGGGTGCGCAAGTACATCCGTGCTTGCGAGGTATGCCAACGCGTAAAGCCTGCGCCATTCGCGCAGGCTCCACTGCAATCACTACCGACTCCGTCGGAGTGTTGGAAGTCCATGTCTTTGGACTTCATCTTTGGTCTTCCCCCGGACAGCGGAGGGAATACCGGTGTTGTGGTCTTCGTCGACCGCTTCAG OLD KEY: TTTGGACTTCATCTTTGGTCTTCCCCCGGACAGCG NEW KEY: AATACCGGTGTTGTGGTCTTCGTCGACCGCTTCAG ........ _A_ XX0X000000000000000000000X0000000X00XX0X000180X00000000000000020090X5000X00 __69__ ........ _T_ 00X00000X0XX0X00X0XX00X0000000XX00000000X019000X0XX00X0000X0000000000090002 __69__ ........ _G_ 000000XX0X00X0XX00000X00X000X00000X000X00X900000000X00X0XX09008X00X04X1X000 __69__ ........ _C_ 0000XX00000000000X00X00X00XX0X00X00X000000001X00X000X00X0000XX00X0000000098 __69__ ........ _N_ 000000000000000000000000000000000000000000000000000000000000000000000000000 __69__ ........ ALL wwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwvvvuuuuuttttsssrrrrqqqqqppppoooooonmkjh __69__ ******** *** ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^**************************************** __69__ ######## CNS AATACCGGTGTTGTGGTCTTCGTCGACCGCTTCAGCAAGATGgtaCATCTTGCTGCGGTgCCgGCaGAaGtGAcc __69__ ######## QLT XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX+++XXXXXXXXXXXXXX+XX+XX+XX?X+XX++ __69__ >CONSENSUS__69__ Length: 2764 [gain: 40] ATGGCGTCGAGGTGACGAAGGCGTGTCAACTCCGGGAGTTGACGCTGCAAACAGTGCGGACGGTTGCAAACGTACCGCACTGACGCAATTTGCATGCTGTCGTGCAGCCGGGCTGCACGACGAAGCGCCATGCGATCAAGCCGGGCTTGATATCGCGCGCCCGCAGACAGGGTCTGCCGGCGAAGGGACACATTACCGTGCAGCCGGGCTGCACGAAGGAAAATGCGGTCAAGCCGGGCTTGATACCGCGCGCCCGCGGACAGGGTCCGCCGGCGAACGACTGTCCACGGCCGGGCCTGGACCAGAAGAACAACTGTGCGGAGCCGGGCTCCGCACAACAAGAAGACGGCGCAAGCGGAAAACGCTGCGCAAGTCTCGGTCCGGGACCGAGACGCAACAAGAGCAGTCTGCTGGGCAGACTGCGGCGGTGACGCCGAATGTCAAGACGCTAAGCGTCTTGACGCGCACCGATACTGGATTCCAGTATCGTGACATGGAACTCGCTAGTCCTCCGACGACGGCGTCGGAGTTGACTTCGCTTCCAGCCATGAGCTGGAAGCGCTTCACGCGCGACTTGCACGATGGACGCATCGAGCAAGTCTGCGTTCTTTCGGACAGCGAAAGAACGGAGAGCGAGAGCGAAGAGCTGAGGCAGCTCTTCATGGGAAGTACCACTGAGAGTGAAGACACTCTCAGTGCGAAGACGAAGCGAGAGCGCTTCGAGGAACAAGGTTGGGACTCGCTGAAGTCGAGTCCCTATTACGAATTGTTGAGGGAGTACAAAGACGTACTCCCGGAAGAGATTCCTGCGGAGCTTCCGCAGGATAAGGGCATTCAGCACGAGATTGATCTCGTGCCGGGCACGAAGTACTGTGTCACGCGGCAGTGGCCACTGCCGCGAGAGCAAGTGAAAGCGATCGACGACTTCTTTGAAAGTCGTCGTAAAGCAGGACAAGTGCGGGAATCAAAGTCCCCGCACAGTGCTCCGACGTTCTGTGTCAAGAAGCCACAGGGCGGATGGCGCATCGTTCATGCCTACAACAAGCTGAACGATGCGACGGTACCGGCGCAGACGCCGATACCGCGAAAAGATGTTATCATCGATTCGATGGCCGGGAGCACCGTTTACAGTGCTCTCGACTTGCGAGATGGATTTTATCAAATCCTAATGCGTGAGAGCGATATCCCTCTCACGGCAGTGAGCACGCCAAGCGGCATGCTCTGGGAATGGCTAGTAATGCCACAGGGGCTTAAGAACGCCCCTGCGACTTTCAACAGGTGCGTGACGCACTTGTTGCGCTCGGTGCGCGACTTCGCACCGAGCTACTTCGATGATGTATTCATCCACAGCCGGGCTGTGGACGGGAAGACCGACGTAGAGATGCACAGGGTGCATCTCCGGAAGCTACTTGAGCTTATGCGAAAGCATAAGCTCTACGCGAACCTGAAGAAGTGTATCTTCGGGGCGAGCGAGATACCCGTCCTCGGGTGTCTCGTAGGGAAGAATGGTGTTCGCCCTGACCCGGAAAAGGTCAGAGTGATCAATGAATGGCCAACGCCTTCAAGTGTCAAGGAACTGAGGCAGTTCCTTGGCTTGGCCACGTACTTGTGCAAGTACGTGGAGGATTATGCGGGCAAGATCCGCCCGCTGTCACAGCTTCTTAAGAAAGAAGCTGTGTGGAATTGGACACCCGATTGCCAAAAGGCATTCGATGCAGTCAAGCGGGGCTTGACTGAGGCGCCGATCTTGGCAGTGGCTGACCAAGATCGCCCATTTCACGTAGTGTGTGACGCATCCGATTTCGCGATCGGATGCGCGTTGATGCAGCACGATCACGAGGGCCGTGATCGTGTCGTCTACTACCAATCGCGTCAGCTGAAGCCAGCTGAGCGCAACTATCCGGTGCATGACAAGGAACTCCTTGCCATGAAGTATGCACTCGCAAAGTTCCGAGTGTACTTGCTTGGGAGTAGACCATTTGTGGTCTACACCGACCATGCTTCACTGCGCACCGCAGTGAAGTCGCCACACATTTCACAAAGAATGGCGAGATGGCTCTCATTCTTTGCGGAGTATAACTTCCGGGTCGAATACAAACCCGGAAGATTGAACGTGGTGGCCGACGCGTTATCACGTCGGCCGGACTATGCAGAAGCTGTTGACGTCAATGCCATTGACGCCATGCGATCGAGCAAACCCACATCATCTCTGTTGGATGATGTGAAGGCCGCGTACGCGCACGACGCGGACGCGAAGCTCTTGCTGGCCTATGGCACAGCGCCTTCTGACAAGTCCCGTCAGAAGCTGCCCAAGCACCTTCGAGCGCGTGCACACCGCTTTCGTGTGCACGACGGACTACTGCTTTACAATGCAGTCGACGACAACGCGGATCGCGTTGTCGTGCCAAATGACCATGACCTGCGACTCAGGATCATGTACGAGTATCATGATGCCCCGACTGCGGGACATCTCGGACGTGAGAAGACTTACGTCCTTCTCACGCGCGACTTCTACTGGCACCACCAGTATAAGTGGGTGCGCAAGTACATCCGTGCTTGCGAGGTATGCCAACGCGTAAAGCCTGCGCCATTCGCGCAGGCTCCACTGCAATCACTACCGACTCCGTCGGAGTGTTGGAAGTCCATGTCTTTGGACTTCATCTTTGGTCTTCCCCCGGACAGCGGAGGGAATACCGGTGTTGTGGTCTTCGTCGACCGCTTCAGCAAGATGGTACATCTTGCTGCGGTGCCGGCAGAAGTGACC OLD KEY: AATACCGGTGTTGTGGTCTTCGTCGACCGCTTCAG NEW KEY: TGGTACATCTTGCTGCGGTGCCGGCAGAAGTGACC ........ _A_ 0000X0X000000000000000000X0XX000X00000XX30X0X000000000000000000X0X00000000X __70__ ........ _T_ X00X000X0XX00X0000X00000000000X00000000000000000000090X09X00910000X0090X920 __70__ ........ _G_ 0XX00000000X00X0XX0X00XX00X00X0X000X0X00700X00XX000X0009000X00X0000X91X0000 __70__ ........ _C_ 00000X00X000X00X0000XX00X00000000XX0X0000X000X009XX00X0010X0090090000000180 __70__ ........ _N_ 000000000000000000000000000000000000000000000000000000000000000000000000000 __70__ ........ ALL ppppppppppppppppppppppppppppppppppppppppppppooooooooooonnmmlkkkjjiihgffecba __70__ ******** *** ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^**************************************** __70__ ######## CNS TGGTACATCTTGCTGCGGTGCCGGCAGAAGTGACCGCGAAgCAGACGGcCCGtCTgtTCGtcGAcATGgtGTtcA __70__ ######## QLT XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX@XXXXXXX+XXX+XX++XXX++XX+XXX++XX++X __70__ >CONSENSUS__70__ Length: 2804 [gain: 40] ATGGCGTCGAGGTGACGAAGGCGTGTCAACTCCGGGAGTTGACGCTGCAAACAGTGCGGACGGTTGCAAACGTACCGCACTGACGCAATTTGCATGCTGTCGTGCAGCCGGGCTGCACGACGAAGCGCCATGCGATCAAGCCGGGCTTGATATCGCGCGCCCGCAGACAGGGTCTGCCGGCGAAGGGACACATTACCGTGCAGCCGGGCTGCACGAAGGAAAATGCGGTCAAGCCGGGCTTGATACCGCGCGCCCGCGGACAGGGTCCGCCGGCGAACGACTGTCCACGGCCGGGCCTGGACCAGAAGAACAACTGTGCGGAGCCGGGCTCCGCACAACAAGAAGACGGCGCAAGCGGAAAACGCTGCGCAAGTCTCGGTCCGGGACCGAGACGCAACAAGAGCAGTCTGCTGGGCAGACTGCGGCGGTGACGCCGAATGTCAAGACGCTAAGCGTCTTGACGCGCACCGATACTGGATTCCAGTATCGTGACATGGAACTCGCTAGTCCTCCGACGACGGCGTCGGAGTTGACTTCGCTTCCAGCCATGAGCTGGAAGCGCTTCACGCGCGACTTGCACGATGGACGCATCGAGCAAGTCTGCGTTCTTTCGGACAGCGAAAGAACGGAGAGCGAGAGCGAAGAGCTGAGGCAGCTCTTCATGGGAAGTACCACTGAGAGTGAAGACACTCTCAGTGCGAAGACGAAGCGAGAGCGCTTCGAGGAACAAGGTTGGGACTCGCTGAAGTCGAGTCCCTATTACGAATTGTTGAGGGAGTACAAAGACGTACTCCCGGAAGAGATTCCTGCGGAGCTTCCGCAGGATAAGGGCATTCAGCACGAGATTGATCTCGTGCCGGGCACGAAGTACTGTGTCACGCGGCAGTGGCCACTGCCGCGAGAGCAAGTGAAAGCGATCGACGACTTCTTTGAAAGTCGTCGTAAAGCAGGACAAGTGCGGGAATCAAAGTCCCCGCACAGTGCTCCGACGTTCTGTGTCAAGAAGCCACAGGGCGGATGGCGCATCGTTCATGCCTACAACAAGCTGAACGATGCGACGGTACCGGCGCAGACGCCGATACCGCGAAAAGATGTTATCATCGATTCGATGGCCGGGAGCACCGTTTACAGTGCTCTCGACTTGCGAGATGGATTTTATCAAATCCTAATGCGTGAGAGCGATATCCCTCTCACGGCAGTGAGCACGCCAAGCGGCATGCTCTGGGAATGGCTAGTAATGCCACAGGGGCTTAAGAACGCCCCTGCGACTTTCAACAGGTGCGTGACGCACTTGTTGCGCTCGGTGCGCGACTTCGCACCGAGCTACTTCGATGATGTATTCATCCACAGCCGGGCTGTGGACGGGAAGACCGACGTAGAGATGCACAGGGTGCATCTCCGGAAGCTACTTGAGCTTATGCGAAAGCATAAGCTCTACGCGAACCTGAAGAAGTGTATCTTCGGGGCGAGCGAGATACCCGTCCTCGGGTGTCTCGTAGGGAAGAATGGTGTTCGCCCTGACCCGGAAAAGGTCAGAGTGATCAATGAATGGCCAACGCCTTCAAGTGTCAAGGAACTGAGGCAGTTCCTTGGCTTGGCCACGTACTTGTGCAAGTACGTGGAGGATTATGCGGGCAAGATCCGCCCGCTGTCACAGCTTCTTAAGAAAGAAGCTGTGTGGAATTGGACACCCGATTGCCAAAAGGCATTCGATGCAGTCAAGCGGGGCTTGACTGAGGCGCCGATCTTGGCAGTGGCTGACCAAGATCGCCCATTTCACGTAGTGTGTGACGCATCCGATTTCGCGATCGGATGCGCGTTGATGCAGCACGATCACGAGGGCCGTGATCGTGTCGTCTACTACCAATCGCGTCAGCTGAAGCCAGCTGAGCGCAACTATCCGGTGCATGACAAGGAACTCCTTGCCATGAAGTATGCACTCGCAAAGTTCCGAGTGTACTTGCTTGGGAGTAGACCATTTGTGGTCTACACCGACCATGCTTCACTGCGCACCGCAGTGAAGTCGCCACACATTTCACAAAGAATGGCGAGATGGCTCTCATTCTTTGCGGAGTATAACTTCCGGGTCGAATACAAACCCGGAAGATTGAACGTGGTGGCCGACGCGTTATCACGTCGGCCGGACTATGCAGAAGCTGTTGACGTCAATGCCATTGACGCCATGCGATCGAGCAAACCCACATCATCTCTGTTGGATGATGTGAAGGCCGCGTACGCGCACGACGCGGACGCGAAGCTCTTGCTGGCCTATGGCACAGCGCCTTCTGACAAGTCCCGTCAGAAGCTGCCCAAGCACCTTCGAGCGCGTGCACACCGCTTTCGTGTGCACGACGGACTACTGCTTTACAATGCAGTCGACGACAACGCGGATCGCGTTGTCGTGCCAAATGACCATGACCTGCGACTCAGGATCATGTACGAGTATCATGATGCCCCGACTGCGGGACATCTCGGACGTGAGAAGACTTACGTCCTTCTCACGCGCGACTTCTACTGGCACCACCAGTATAAGTGGGTGCGCAAGTACATCCGTGCTTGCGAGGTATGCCAACGCGTAAAGCCTGCGCCATTCGCGCAGGCTCCACTGCAATCACTACCGACTCCGTCGGAGTGTTGGAAGTCCATGTCTTTGGACTTCATCTTTGGTCTTCCCCCGGACAGCGGAGGGAATACCGGTGTTGTGGTCTTCGTCGACCGCTTCAGCAAGATGGTACATCTTGCTGCGGTGCCGGCAGAAGTGACCGCGAAGCAGACGGCCCGTCTGTTCGTCGACATGGTGTTCA OLD KEY: TGGTACATCTTGCTGCGGTGCCGGCAGAAGTGACC NEW KEY: GCAGACGGCCCGTCTGTTCGTCGACATGGTGTTCA ........ _A_ 00X0X000000000000000000X0X00000000XXX0X00X0000X000006000X0X000000000X090X09 __71__ ........ _T_ 000000000000X0X0XX00X00000X00X0XX000000000X0000X00004000000X10X0X0000000000 __71__ ........ _G_ X00X00XX000X000X000X00X0000XX0X000000000000XX000900X000900000X0X00XX000X0X0 __71__ ........ _C_ 0X000X00XXX00X0000X00X00X00000000X000X0XX0000X000XX00XX00X0090000X000X10000 __71__ ........ _N_ 000000000000000000000000000000000000000000000000000000000000000000000000000 __71__ ........ ALL ttttttttttttttttttttttttttttttttttttttssssssrrrrrqqqqqppppppooooonmmlkkjifc __71__ ******** *** ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^**************************************** __71__ ######## CNS GCAGACGGCCCGTCTGTTCGTCGACATGGTGTTCAAACACCATGGCATgCCGaCCgACATcGTGTCGGACaGAGa __71__ ######## QLT XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX+XXX!XX+XXXX+XXXXXXXXX+XXX+ __71__ >CONSENSUS__71__ Length: 2844 [gain: 40] ATGGCGTCGAGGTGACGAAGGCGTGTCAACTCCGGGAGTTGACGCTGCAAACAGTGCGGACGGTTGCAAACGTACCGCACTGACGCAATTTGCATGCTGTCGTGCAGCCGGGCTGCACGACGAAGCGCCATGCGATCAAGCCGGGCTTGATATCGCGCGCCCGCAGACAGGGTCTGCCGGCGAAGGGACACATTACCGTGCAGCCGGGCTGCACGAAGGAAAATGCGGTCAAGCCGGGCTTGATACCGCGCGCCCGCGGACAGGGTCCGCCGGCGAACGACTGTCCACGGCCGGGCCTGGACCAGAAGAACAACTGTGCGGAGCCGGGCTCCGCACAACAAGAAGACGGCGCAAGCGGAAAACGCTGCGCAAGTCTCGGTCCGGGACCGAGACGCAACAAGAGCAGTCTGCTGGGCAGACTGCGGCGGTGACGCCGAATGTCAAGACGCTAAGCGTCTTGACGCGCACCGATACTGGATTCCAGTATCGTGACATGGAACTCGCTAGTCCTCCGACGACGGCGTCGGAGTTGACTTCGCTTCCAGCCATGAGCTGGAAGCGCTTCACGCGCGACTTGCACGATGGACGCATCGAGCAAGTCTGCGTTCTTTCGGACAGCGAAAGAACGGAGAGCGAGAGCGAAGAGCTGAGGCAGCTCTTCATGGGAAGTACCACTGAGAGTGAAGACACTCTCAGTGCGAAGACGAAGCGAGAGCGCTTCGAGGAACAAGGTTGGGACTCGCTGAAGTCGAGTCCCTATTACGAATTGTTGAGGGAGTACAAAGACGTACTCCCGGAAGAGATTCCTGCGGAGCTTCCGCAGGATAAGGGCATTCAGCACGAGATTGATCTCGTGCCGGGCACGAAGTACTGTGTCACGCGGCAGTGGCCACTGCCGCGAGAGCAAGTGAAAGCGATCGACGACTTCTTTGAAAGTCGTCGTAAAGCAGGACAAGTGCGGGAATCAAAGTCCCCGCACAGTGCTCCGACGTTCTGTGTCAAGAAGCCACAGGGCGGATGGCGCATCGTTCATGCCTACAACAAGCTGAACGATGCGACGGTACCGGCGCAGACGCCGATACCGCGAAAAGATGTTATCATCGATTCGATGGCCGGGAGCACCGTTTACAGTGCTCTCGACTTGCGAGATGGATTTTATCAAATCCTAATGCGTGAGAGCGATATCCCTCTCACGGCAGTGAGCACGCCAAGCGGCATGCTCTGGGAATGGCTAGTAATGCCACAGGGGCTTAAGAACGCCCCTGCGACTTTCAACAGGTGCGTGACGCACTTGTTGCGCTCGGTGCGCGACTTCGCACCGAGCTACTTCGATGATGTATTCATCCACAGCCGGGCTGTGGACGGGAAGACCGACGTAGAGATGCACAGGGTGCATCTCCGGAAGCTACTTGAGCTTATGCGAAAGCATAAGCTCTACGCGAACCTGAAGAAGTGTATCTTCGGGGCGAGCGAGATACCCGTCCTCGGGTGTCTCGTAGGGAAGAATGGTGTTCGCCCTGACCCGGAAAAGGTCAGAGTGATCAATGAATGGCCAACGCCTTCAAGTGTCAAGGAACTGAGGCAGTTCCTTGGCTTGGCCACGTACTTGTGCAAGTACGTGGAGGATTATGCGGGCAAGATCCGCCCGCTGTCACAGCTTCTTAAGAAAGAAGCTGTGTGGAATTGGACACCCGATTGCCAAAAGGCATTCGATGCAGTCAAGCGGGGCTTGACTGAGGCGCCGATCTTGGCAGTGGCTGACCAAGATCGCCCATTTCACGTAGTGTGTGACGCATCCGATTTCGCGATCGGATGCGCGTTGATGCAGCACGATCACGAGGGCCGTGATCGTGTCGTCTACTACCAATCGCGTCAGCTGAAGCCAGCTGAGCGCAACTATCCGGTGCATGACAAGGAACTCCTTGCCATGAAGTATGCACTCGCAAAGTTCCGAGTGTACTTGCTTGGGAGTAGACCATTTGTGGTCTACACCGACCATGCTTCACTGCGCACCGCAGTGAAGTCGCCACACATTTCACAAAGAATGGCGAGATGGCTCTCATTCTTTGCGGAGTATAACTTCCGGGTCGAATACAAACCCGGAAGATTGAACGTGGTGGCCGACGCGTTATCACGTCGGCCGGACTATGCAGAAGCTGTTGACGTCAATGCCATTGACGCCATGCGATCGAGCAAACCCACATCATCTCTGTTGGATGATGTGAAGGCCGCGTACGCGCACGACGCGGACGCGAAGCTCTTGCTGGCCTATGGCACAGCGCCTTCTGACAAGTCCCGTCAGAAGCTGCCCAAGCACCTTCGAGCGCGTGCACACCGCTTTCGTGTGCACGACGGACTACTGCTTTACAATGCAGTCGACGACAACGCGGATCGCGTTGTCGTGCCAAATGACCATGACCTGCGACTCAGGATCATGTACGAGTATCATGATGCCCCGACTGCGGGACATCTCGGACGTGAGAAGACTTACGTCCTTCTCACGCGCGACTTCTACTGGCACCACCAGTATAAGTGGGTGCGCAAGTACATCCGTGCTTGCGAGGTATGCCAACGCGTAAAGCCTGCGCCATTCGCGCAGGCTCCACTGCAATCACTACCGACTCCGTCGGAGTGTTGGAAGTCCATGTCTTTGGACTTCATCTTTGGTCTTCCCCCGGACAGCGGAGGGAATACCGGTGTTGTGGTCTTCGTCGACCGCTTCAGCAAGATGGTACATCTTGCTGCGGTGCCGGCAGAAGTGACCGCGAAGCAGACGGCCCGTCTGTTCGTCGACATGGTGTTCAAACACCATGGCATGCCGACCGACATCGTGTCGGACAGAGA OLD KEY: GCAGACGGCCCGTCTGTTCGTCGACATGGTGTTCA NEW KEY: CATGGCATGCCGACCGACATCGTGTCGGACAGAGA ........ _A_ 0X0000X00000X000X0X000000000X0X0X0X0000000000X0X00009000000009X09X000000X0X __72__ ........ _T_ 00X0000X00000000000X00X0X000000000000000009X000000000109090000000008099X000 __72__ ........ _G_ 000XX000X00X000X00000X0X00XX000X0X0000X0X0000000X0X0000090XX000X00919100000 __72__ ........ _C_ X0000X000XX00XX00X00X0000X000X00000XXX0X0X00X0X00X0909X00100X100000000000X0 __72__ ........ _N_ 000000000000000000000000000000000000000000000000000000000000000000000000000 __72__ ........ ALL ttttttttttttttttttttttttttttttttttttttttssssssrrrrqqqqqqppppoooonnmlkjigfcb __72__ ******** *** ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^**************************************** __72__ ######## CNS CATGGCATGCCGACCGACATCGTGTCGGACAGAGACCCGCGCtTCACAGCGcacCtgtGGCaAGaAgtgttTACA __72__ ######## QLT XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX+XXXXXXXX+++X+++XXX+XX+X+++++XXXX __72__ >CONSENSUS__72__ Length: 2884 [gain: 40] ATGGCGTCGAGGTGACGAAGGCGTGTCAACTCCGGGAGTTGACGCTGCAAACAGTGCGGACGGTTGCAAACGTACCGCACTGACGCAATTTGCATGCTGTCGTGCAGCCGGGCTGCACGACGAAGCGCCATGCGATCAAGCCGGGCTTGATATCGCGCGCCCGCAGACAGGGTCTGCCGGCGAAGGGACACATTACCGTGCAGCCGGGCTGCACGAAGGAAAATGCGGTCAAGCCGGGCTTGATACCGCGCGCCCGCGGACAGGGTCCGCCGGCGAACGACTGTCCACGGCCGGGCCTGGACCAGAAGAACAACTGTGCGGAGCCGGGCTCCGCACAACAAGAAGACGGCGCAAGCGGAAAACGCTGCGCAAGTCTCGGTCCGGGACCGAGACGCAACAAGAGCAGTCTGCTGGGCAGACTGCGGCGGTGACGCCGAATGTCAAGACGCTAAGCGTCTTGACGCGCACCGATACTGGATTCCAGTATCGTGACATGGAACTCGCTAGTCCTCCGACGACGGCGTCGGAGTTGACTTCGCTTCCAGCCATGAGCTGGAAGCGCTTCACGCGCGACTTGCACGATGGACGCATCGAGCAAGTCTGCGTTCTTTCGGACAGCGAAAGAACGGAGAGCGAGAGCGAAGAGCTGAGGCAGCTCTTCATGGGAAGTACCACTGAGAGTGAAGACACTCTCAGTGCGAAGACGAAGCGAGAGCGCTTCGAGGAACAAGGTTGGGACTCGCTGAAGTCGAGTCCCTATTACGAATTGTTGAGGGAGTACAAAGACGTACTCCCGGAAGAGATTCCTGCGGAGCTTCCGCAGGATAAGGGCATTCAGCACGAGATTGATCTCGTGCCGGGCACGAAGTACTGTGTCACGCGGCAGTGGCCACTGCCGCGAGAGCAAGTGAAAGCGATCGACGACTTCTTTGAAAGTCGTCGTAAAGCAGGACAAGTGCGGGAATCAAAGTCCCCGCACAGTGCTCCGACGTTCTGTGTCAAGAAGCCACAGGGCGGATGGCGCATCGTTCATGCCTACAACAAGCTGAACGATGCGACGGTACCGGCGCAGACGCCGATACCGCGAAAAGATGTTATCATCGATTCGATGGCCGGGAGCACCGTTTACAGTGCTCTCGACTTGCGAGATGGATTTTATCAAATCCTAATGCGTGAGAGCGATATCCCTCTCACGGCAGTGAGCACGCCAAGCGGCATGCTCTGGGAATGGCTAGTAATGCCACAGGGGCTTAAGAACGCCCCTGCGACTTTCAACAGGTGCGTGACGCACTTGTTGCGCTCGGTGCGCGACTTCGCACCGAGCTACTTCGATGATGTATTCATCCACAGCCGGGCTGTGGACGGGAAGACCGACGTAGAGATGCACAGGGTGCATCTCCGGAAGCTACTTGAGCTTATGCGAAAGCATAAGCTCTACGCGAACCTGAAGAAGTGTATCTTCGGGGCGAGCGAGATACCCGTCCTCGGGTGTCTCGTAGGGAAGAATGGTGTTCGCCCTGACCCGGAAAAGGTCAGAGTGATCAATGAATGGCCAACGCCTTCAAGTGTCAAGGAACTGAGGCAGTTCCTTGGCTTGGCCACGTACTTGTGCAAGTACGTGGAGGATTATGCGGGCAAGATCCGCCCGCTGTCACAGCTTCTTAAGAAAGAAGCTGTGTGGAATTGGACACCCGATTGCCAAAAGGCATTCGATGCAGTCAAGCGGGGCTTGACTGAGGCGCCGATCTTGGCAGTGGCTGACCAAGATCGCCCATTTCACGTAGTGTGTGACGCATCCGATTTCGCGATCGGATGCGCGTTGATGCAGCACGATCACGAGGGCCGTGATCGTGTCGTCTACTACCAATCGCGTCAGCTGAAGCCAGCTGAGCGCAACTATCCGGTGCATGACAAGGAACTCCTTGCCATGAAGTATGCACTCGCAAAGTTCCGAGTGTACTTGCTTGGGAGTAGACCATTTGTGGTCTACACCGACCATGCTTCACTGCGCACCGCAGTGAAGTCGCCACACATTTCACAAAGAATGGCGAGATGGCTCTCATTCTTTGCGGAGTATAACTTCCGGGTCGAATACAAACCCGGAAGATTGAACGTGGTGGCCGACGCGTTATCACGTCGGCCGGACTATGCAGAAGCTGTTGACGTCAATGCCATTGACGCCATGCGATCGAGCAAACCCACATCATCTCTGTTGGATGATGTGAAGGCCGCGTACGCGCACGACGCGGACGCGAAGCTCTTGCTGGCCTATGGCACAGCGCCTTCTGACAAGTCCCGTCAGAAGCTGCCCAAGCACCTTCGAGCGCGTGCACACCGCTTTCGTGTGCACGACGGACTACTGCTTTACAATGCAGTCGACGACAACGCGGATCGCGTTGTCGTGCCAAATGACCATGACCTGCGACTCAGGATCATGTACGAGTATCATGATGCCCCGACTGCGGGACATCTCGGACGTGAGAAGACTTACGTCCTTCTCACGCGCGACTTCTACTGGCACCACCAGTATAAGTGGGTGCGCAAGTACATCCGTGCTTGCGAGGTATGCCAACGCGTAAAGCCTGCGCCATTCGCGCAGGCTCCACTGCAATCACTACCGACTCCGTCGGAGTGTTGGAAGTCCATGTCTTTGGACTTCATCTTTGGTCTTCCCCCGGACAGCGGAGGGAATACCGGTGTTGTGGTCTTCGTCGACCGCTTCAGCAAGATGGTACATCTTGCTGCGGTGCCGGCAGAAGTGACCGCGAAGCAGACGGCCCGTCTGTTCGTCGACATGGTGTTCAAACACCATGGCATGCCGACCGACATCGTGTCGGACAGAGACCCGCGCTTCACAGCGCACCTGTGGCAAGAAGTGTTTACA OLD KEY: CATGGCATGCCGACCGACATCGTGTCGGACAGAGA NEW KEY: GCTTCACAGCGCACCTGTGGCAAGAAGTGTTTACA ........ _A_ 00000X0X0000X00000000XX0XX000000X0X000000000X000X2000004X00000X000000X00X00 __73__ ........ _T_ 00XX00000000000X0X000000000X0XXX0000XX0XX0000000000XXX000X0X0000X00000900X0 __73__ ........ _G_ X0000000X0X00000X0XX000X00X0X000000000000XXX0X000800000000X00X000X0XX000000 __73__ ........ _C_ 0X00X0X00X0X0XX00000X000000000000X0X00X0000000XX00X000X60000X00X00X0001X00X __73__ ........ _N_ 000000000000000000000000000000000000000000000000000000000000000000000000000 __73__ ........ ALL wwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwvvvuuttsssrrrqqppooonjh __73__ ******** *** ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^**************************************** __73__ ######## CNS GCTTCACAGCGCACCTGTGGCAAGAAGTGTTTACACTTCTTGGGAGCCAgCTTTCcATGTCGACTGCGGAtCATC __73__ ######## QLT XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX+XXXXX!XXXXXXXXXXXXXX+XXXX __73__ >CONSENSUS__73__ Length: 2924 [gain: 40] ATGGCGTCGAGGTGACGAAGGCGTGTCAACTCCGGGAGTTGACGCTGCAAACAGTGCGGACGGTTGCAAACGTACCGCACTGACGCAATTTGCATGCTGTCGTGCAGCCGGGCTGCACGACGAAGCGCCATGCGATCAAGCCGGGCTTGATATCGCGCGCCCGCAGACAGGGTCTGCCGGCGAAGGGACACATTACCGTGCAGCCGGGCTGCACGAAGGAAAATGCGGTCAAGCCGGGCTTGATACCGCGCGCCCGCGGACAGGGTCCGCCGGCGAACGACTGTCCACGGCCGGGCCTGGACCAGAAGAACAACTGTGCGGAGCCGGGCTCCGCACAACAAGAAGACGGCGCAAGCGGAAAACGCTGCGCAAGTCTCGGTCCGGGACCGAGACGCAACAAGAGCAGTCTGCTGGGCAGACTGCGGCGGTGACGCCGAATGTCAAGACGCTAAGCGTCTTGACGCGCACCGATACTGGATTCCAGTATCGTGACATGGAACTCGCTAGTCCTCCGACGACGGCGTCGGAGTTGACTTCGCTTCCAGCCATGAGCTGGAAGCGCTTCACGCGCGACTTGCACGATGGACGCATCGAGCAAGTCTGCGTTCTTTCGGACAGCGAAAGAACGGAGAGCGAGAGCGAAGAGCTGAGGCAGCTCTTCATGGGAAGTACCACTGAGAGTGAAGACACTCTCAGTGCGAAGACGAAGCGAGAGCGCTTCGAGGAACAAGGTTGGGACTCGCTGAAGTCGAGTCCCTATTACGAATTGTTGAGGGAGTACAAAGACGTACTCCCGGAAGAGATTCCTGCGGAGCTTCCGCAGGATAAGGGCATTCAGCACGAGATTGATCTCGTGCCGGGCACGAAGTACTGTGTCACGCGGCAGTGGCCACTGCCGCGAGAGCAAGTGAAAGCGATCGACGACTTCTTTGAAAGTCGTCGTAAAGCAGGACAAGTGCGGGAATCAAAGTCCCCGCACAGTGCTCCGACGTTCTGTGTCAAGAAGCCACAGGGCGGATGGCGCATCGTTCATGCCTACAACAAGCTGAACGATGCGACGGTACCGGCGCAGACGCCGATACCGCGAAAAGATGTTATCATCGATTCGATGGCCGGGAGCACCGTTTACAGTGCTCTCGACTTGCGAGATGGATTTTATCAAATCCTAATGCGTGAGAGCGATATCCCTCTCACGGCAGTGAGCACGCCAAGCGGCATGCTCTGGGAATGGCTAGTAATGCCACAGGGGCTTAAGAACGCCCCTGCGACTTTCAACAGGTGCGTGACGCACTTGTTGCGCTCGGTGCGCGACTTCGCACCGAGCTACTTCGATGATGTATTCATCCACAGCCGGGCTGTGGACGGGAAGACCGACGTAGAGATGCACAGGGTGCATCTCCGGAAGCTACTTGAGCTTATGCGAAAGCATAAGCTCTACGCGAACCTGAAGAAGTGTATCTTCGGGGCGAGCGAGATACCCGTCCTCGGGTGTCTCGTAGGGAAGAATGGTGTTCGCCCTGACCCGGAAAAGGTCAGAGTGATCAATGAATGGCCAACGCCTTCAAGTGTCAAGGAACTGAGGCAGTTCCTTGGCTTGGCCACGTACTTGTGCAAGTACGTGGAGGATTATGCGGGCAAGATCCGCCCGCTGTCACAGCTTCTTAAGAAAGAAGCTGTGTGGAATTGGACACCCGATTGCCAAAAGGCATTCGATGCAGTCAAGCGGGGCTTGACTGAGGCGCCGATCTTGGCAGTGGCTGACCAAGATCGCCCATTTCACGTAGTGTGTGACGCATCCGATTTCGCGATCGGATGCGCGTTGATGCAGCACGATCACGAGGGCCGTGATCGTGTCGTCTACTACCAATCGCGTCAGCTGAAGCCAGCTGAGCGCAACTATCCGGTGCATGACAAGGAACTCCTTGCCATGAAGTATGCACTCGCAAAGTTCCGAGTGTACTTGCTTGGGAGTAGACCATTTGTGGTCTACACCGACCATGCTTCACTGCGCACCGCAGTGAAGTCGCCACACATTTCACAAAGAATGGCGAGATGGCTCTCATTCTTTGCGGAGTATAACTTCCGGGTCGAATACAAACCCGGAAGATTGAACGTGGTGGCCGACGCGTTATCACGTCGGCCGGACTATGCAGAAGCTGTTGACGTCAATGCCATTGACGCCATGCGATCGAGCAAACCCACATCATCTCTGTTGGATGATGTGAAGGCCGCGTACGCGCACGACGCGGACGCGAAGCTCTTGCTGGCCTATGGCACAGCGCCTTCTGACAAGTCCCGTCAGAAGCTGCCCAAGCACCTTCGAGCGCGTGCACACCGCTTTCGTGTGCACGACGGACTACTGCTTTACAATGCAGTCGACGACAACGCGGATCGCGTTGTCGTGCCAAATGACCATGACCTGCGACTCAGGATCATGTACGAGTATCATGATGCCCCGACTGCGGGACATCTCGGACGTGAGAAGACTTACGTCCTTCTCACGCGCGACTTCTACTGGCACCACCAGTATAAGTGGGTGCGCAAGTACATCCGTGCTTGCGAGGTATGCCAACGCGTAAAGCCTGCGCCATTCGCGCAGGCTCCACTGCAATCACTACCGACTCCGTCGGAGTGTTGGAAGTCCATGTCTTTGGACTTCATCTTTGGTCTTCCCCCGGACAGCGGAGGGAATACCGGTGTTGTGGTCTTCGTCGACCGCTTCAGCAAGATGGTACATCTTGCTGCGGTGCCGGCAGAAGTGACCGCGAAGCAGACGGCCCGTCTGTTCGTCGACATGGTGTTCAAACACCATGGCATGCCGACCGACATCGTGTCGGACAGAGACCCGCGCTTCACAGCGCACCTGTGGCAAGAAGTGTTTACACTTCTTGGGAGCCAGCTTTCCATGTCGACTGCGGATCATC OLD KEY: GCTTCACAGCGCACCTGTGGCAAGAAGTGTTTACA NEW KEY: TGGGAGCCAGCTTTCCATGTCGACTGCGGATCATC ........ _A_ 0000X000X0000000X00000X000000X00X00000X0X000X00000XXX000X0000000XX000000000 __74__ ........ _T_ X0000000000XXX000X0X0000X00000X00X00000000000000900000000000009000900009009 __74__ ........ _G_ 0XXX0X000X00000000X00X000X0XX0000000X00X00XX00XX0000000X0X0X0X0X0000X0X0X00 __74__ ........ _C_ 000000XX00X000XX0000X00X00X0000X00XX0X000X000X001X000XX000X0X000001X0X000X0 __74__ ........ _N_ 000000000000000000000000000000000000000000000000000000000000000000000000000 __74__ ........ ALL wwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwvvuuttssrrqqppooonmk __74__ ******** *** ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^**************************************** __74__ ######## CNS TGGGAGCCAGCTTTCCATGTCGACTGCGGATCATCCGCAGACGGACGGtCAAACCGAGCGCGtGAAtCGCGtGCt __74__ ######## QLT XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX+XXXXXXXXXXXXX+XXX+XXXX+XX+ __74__ >CONSENSUS__74__ Length: 2964 [gain: 40] ATGGCGTCGAGGTGACGAAGGCGTGTCAACTCCGGGAGTTGACGCTGCAAACAGTGCGGACGGTTGCAAACGTACCGCACTGACGCAATTTGCATGCTGTCGTGCAGCCGGGCTGCACGACGAAGCGCCATGCGATCAAGCCGGGCTTGATATCGCGCGCCCGCAGACAGGGTCTGCCGGCGAAGGGACACATTACCGTGCAGCCGGGCTGCACGAAGGAAAATGCGGTCAAGCCGGGCTTGATACCGCGCGCCCGCGGACAGGGTCCGCCGGCGAACGACTGTCCACGGCCGGGCCTGGACCAGAAGAACAACTGTGCGGAGCCGGGCTCCGCACAACAAGAAGACGGCGCAAGCGGAAAACGCTGCGCAAGTCTCGGTCCGGGACCGAGACGCAACAAGAGCAGTCTGCTGGGCAGACTGCGGCGGTGACGCCGAATGTCAAGACGCTAAGCGTCTTGACGCGCACCGATACTGGATTCCAGTATCGTGACATGGAACTCGCTAGTCCTCCGACGACGGCGTCGGAGTTGACTTCGCTTCCAGCCATGAGCTGGAAGCGCTTCACGCGCGACTTGCACGATGGACGCATCGAGCAAGTCTGCGTTCTTTCGGACAGCGAAAGAACGGAGAGCGAGAGCGAAGAGCTGAGGCAGCTCTTCATGGGAAGTACCACTGAGAGTGAAGACACTCTCAGTGCGAAGACGAAGCGAGAGCGCTTCGAGGAACAAGGTTGGGACTCGCTGAAGTCGAGTCCCTATTACGAATTGTTGAGGGAGTACAAAGACGTACTCCCGGAAGAGATTCCTGCGGAGCTTCCGCAGGATAAGGGCATTCAGCACGAGATTGATCTCGTGCCGGGCACGAAGTACTGTGTCACGCGGCAGTGGCCACTGCCGCGAGAGCAAGTGAAAGCGATCGACGACTTCTTTGAAAGTCGTCGTAAAGCAGGACAAGTGCGGGAATCAAAGTCCCCGCACAGTGCTCCGACGTTCTGTGTCAAGAAGCCACAGGGCGGATGGCGCATCGTTCATGCCTACAACAAGCTGAACGATGCGACGGTACCGGCGCAGACGCCGATACCGCGAAAAGATGTTATCATCGATTCGATGGCCGGGAGCACCGTTTACAGTGCTCTCGACTTGCGAGATGGATTTTATCAAATCCTAATGCGTGAGAGCGATATCCCTCTCACGGCAGTGAGCACGCCAAGCGGCATGCTCTGGGAATGGCTAGTAATGCCACAGGGGCTTAAGAACGCCCCTGCGACTTTCAACAGGTGCGTGACGCACTTGTTGCGCTCGGTGCGCGACTTCGCACCGAGCTACTTCGATGATGTATTCATCCACAGCCGGGCTGTGGACGGGAAGACCGACGTAGAGATGCACAGGGTGCATCTCCGGAAGCTACTTGAGCTTATGCGAAAGCATAAGCTCTACGCGAACCTGAAGAAGTGTATCTTCGGGGCGAGCGAGATACCCGTCCTCGGGTGTCTCGTAGGGAAGAATGGTGTTCGCCCTGACCCGGAAAAGGTCAGAGTGATCAATGAATGGCCAACGCCTTCAAGTGTCAAGGAACTGAGGCAGTTCCTTGGCTTGGCCACGTACTTGTGCAAGTACGTGGAGGATTATGCGGGCAAGATCCGCCCGCTGTCACAGCTTCTTAAGAAAGAAGCTGTGTGGAATTGGACACCCGATTGCCAAAAGGCATTCGATGCAGTCAAGCGGGGCTTGACTGAGGCGCCGATCTTGGCAGTGGCTGACCAAGATCGCCCATTTCACGTAGTGTGTGACGCATCCGATTTCGCGATCGGATGCGCGTTGATGCAGCACGATCACGAGGGCCGTGATCGTGTCGTCTACTACCAATCGCGTCAGCTGAAGCCAGCTGAGCGCAACTATCCGGTGCATGACAAGGAACTCCTTGCCATGAAGTATGCACTCGCAAAGTTCCGAGTGTACTTGCTTGGGAGTAGACCATTTGTGGTCTACACCGACCATGCTTCACTGCGCACCGCAGTGAAGTCGCCACACATTTCACAAAGAATGGCGAGATGGCTCTCATTCTTTGCGGAGTATAACTTCCGGGTCGAATACAAACCCGGAAGATTGAACGTGGTGGCCGACGCGTTATCACGTCGGCCGGACTATGCAGAAGCTGTTGACGTCAATGCCATTGACGCCATGCGATCGAGCAAACCCACATCATCTCTGTTGGATGATGTGAAGGCCGCGTACGCGCACGACGCGGACGCGAAGCTCTTGCTGGCCTATGGCACAGCGCCTTCTGACAAGTCCCGTCAGAAGCTGCCCAAGCACCTTCGAGCGCGTGCACACCGCTTTCGTGTGCACGACGGACTACTGCTTTACAATGCAGTCGACGACAACGCGGATCGCGTTGTCGTGCCAAATGACCATGACCTGCGACTCAGGATCATGTACGAGTATCATGATGCCCCGACTGCGGGACATCTCGGACGTGAGAAGACTTACGTCCTTCTCACGCGCGACTTCTACTGGCACCACCAGTATAAGTGGGTGCGCAAGTACATCCGTGCTTGCGAGGTATGCCAACGCGTAAAGCCTGCGCCATTCGCGCAGGCTCCACTGCAATCACTACCGACTCCGTCGGAGTGTTGGAAGTCCATGTCTTTGGACTTCATCTTTGGTCTTCCCCCGGACAGCGGAGGGAATACCGGTGTTGTGGTCTTCGTCGACCGCTTCAGCAAGATGGTACATCTTGCTGCGGTGCCGGCAGAAGTGACCGCGAAGCAGACGGCCCGTCTGTTCGTCGACATGGTGTTCAAACACCATGGCATGCCGACCGACATCGTGTCGGACAGAGACCCGCGCTTCACAGCGCACCTGTGGCAAGAAGTGTTTACACTTCTTGGGAGCCAGCTTTCCATGTCGACTGCGGATCATCCGCAGACGGACGGTCAAACCGAGCGCGTGAATCGCGTGCT OLD KEY: TGGGAGCCAGCTTTCCATGTCGACTGCGGATCATC NEW KEY: ACGGACGGTCAAACCGAGCGCGTGAATCGCGTGCT ........ _A_ X000X00000XXX000X0000000XX00000000000000X0X00001XX0X000X00000X00000000X90X0 __75__ ........ _T_ 00000000X0000000000000X000X0000X00X00X00080X29X0000000X0000X000X00XX0000X00 __75__ ........ _G_ 00XX00XX0000000X0X0X0X0X0000X0X0X000X00X0000800900X0X0000X0000000X000000000 __75__ ........ _C_ 0X000X000X000XX000X0X000000X0X000X0X00X00200010000000X00X0X0X0X0X000XX0100X __75__ ........ _N_ 000000000000000000000000000000000000000000000000000000000000000000000000000 __75__ ........ ALL OOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOwwwwwwwwwwwwwwwwvuutssrrqppoj __75__ ******** *** ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^**************************************** __75__ ######## CNS ACGGACGGTCAAACCGAGCGCGTGAATCGCGTGCTCGTCGAtATgtTgAAGAGCTACGCTCACTCGTTCCAaTAC __75__ ######## QLT XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX+XX++X+XXXXXXXXXXXXXXXXXXXXXXX+XXX __75__ >CONSENSUS__75__ Length: 3004 [gain: 40] ATGGCGTCGAGGTGACGAAGGCGTGTCAACTCCGGGAGTTGACGCTGCAAACAGTGCGGACGGTTGCAAACGTACCGCACTGACGCAATTTGCATGCTGTCGTGCAGCCGGGCTGCACGACGAAGCGCCATGCGATCAAGCCGGGCTTGATATCGCGCGCCCGCAGACAGGGTCTGCCGGCGAAGGGACACATTACCGTGCAGCCGGGCTGCACGAAGGAAAATGCGGTCAAGCCGGGCTTGATACCGCGCGCCCGCGGACAGGGTCCGCCGGCGAACGACTGTCCACGGCCGGGCCTGGACCAGAAGAACAACTGTGCGGAGCCGGGCTCCGCACAACAAGAAGACGGCGCAAGCGGAAAACGCTGCGCAAGTCTCGGTCCGGGACCGAGACGCAACAAGAGCAGTCTGCTGGGCAGACTGCGGCGGTGACGCCGAATGTCAAGACGCTAAGCGTCTTGACGCGCACCGATACTGGATTCCAGTATCGTGACATGGAACTCGCTAGTCCTCCGACGACGGCGTCGGAGTTGACTTCGCTTCCAGCCATGAGCTGGAAGCGCTTCACGCGCGACTTGCACGATGGACGCATCGAGCAAGTCTGCGTTCTTTCGGACAGCGAAAGAACGGAGAGCGAGAGCGAAGAGCTGAGGCAGCTCTTCATGGGAAGTACCACTGAGAGTGAAGACACTCTCAGTGCGAAGACGAAGCGAGAGCGCTTCGAGGAACAAGGTTGGGACTCGCTGAAGTCGAGTCCCTATTACGAATTGTTGAGGGAGTACAAAGACGTACTCCCGGAAGAGATTCCTGCGGAGCTTCCGCAGGATAAGGGCATTCAGCACGAGATTGATCTCGTGCCGGGCACGAAGTACTGTGTCACGCGGCAGTGGCCACTGCCGCGAGAGCAAGTGAAAGCGATCGACGACTTCTTTGAAAGTCGTCGTAAAGCAGGACAAGTGCGGGAATCAAAGTCCCCGCACAGTGCTCCGACGTTCTGTGTCAAGAAGCCACAGGGCGGATGGCGCATCGTTCATGCCTACAACAAGCTGAACGATGCGACGGTACCGGCGCAGACGCCGATACCGCGAAAAGATGTTATCATCGATTCGATGGCCGGGAGCACCGTTTACAGTGCTCTCGACTTGCGAGATGGATTTTATCAAATCCTAATGCGTGAGAGCGATATCCCTCTCACGGCAGTGAGCACGCCAAGCGGCATGCTCTGGGAATGGCTAGTAATGCCACAGGGGCTTAAGAACGCCCCTGCGACTTTCAACAGGTGCGTGACGCACTTGTTGCGCTCGGTGCGCGACTTCGCACCGAGCTACTTCGATGATGTATTCATCCACAGCCGGGCTGTGGACGGGAAGACCGACGTAGAGATGCACAGGGTGCATCTCCGGAAGCTACTTGAGCTTATGCGAAAGCATAAGCTCTACGCGAACCTGAAGAAGTGTATCTTCGGGGCGAGCGAGATACCCGTCCTCGGGTGTCTCGTAGGGAAGAATGGTGTTCGCCCTGACCCGGAAAAGGTCAGAGTGATCAATGAATGGCCAACGCCTTCAAGTGTCAAGGAACTGAGGCAGTTCCTTGGCTTGGCCACGTACTTGTGCAAGTACGTGGAGGATTATGCGGGCAAGATCCGCCCGCTGTCACAGCTTCTTAAGAAAGAAGCTGTGTGGAATTGGACACCCGATTGCCAAAAGGCATTCGATGCAGTCAAGCGGGGCTTGACTGAGGCGCCGATCTTGGCAGTGGCTGACCAAGATCGCCCATTTCACGTAGTGTGTGACGCATCCGATTTCGCGATCGGATGCGCGTTGATGCAGCACGATCACGAGGGCCGTGATCGTGTCGTCTACTACCAATCGCGTCAGCTGAAGCCAGCTGAGCGCAACTATCCGGTGCATGACAAGGAACTCCTTGCCATGAAGTATGCACTCGCAAAGTTCCGAGTGTACTTGCTTGGGAGTAGACCATTTGTGGTCTACACCGACCATGCTTCACTGCGCACCGCAGTGAAGTCGCCACACATTTCACAAAGAATGGCGAGATGGCTCTCATTCTTTGCGGAGTATAACTTCCGGGTCGAATACAAACCCGGAAGATTGAACGTGGTGGCCGACGCGTTATCACGTCGGCCGGACTATGCAGAAGCTGTTGACGTCAATGCCATTGACGCCATGCGATCGAGCAAACCCACATCATCTCTGTTGGATGATGTGAAGGCCGCGTACGCGCACGACGCGGACGCGAAGCTCTTGCTGGCCTATGGCACAGCGCCTTCTGACAAGTCCCGTCAGAAGCTGCCCAAGCACCTTCGAGCGCGTGCACACCGCTTTCGTGTGCACGACGGACTACTGCTTTACAATGCAGTCGACGACAACGCGGATCGCGTTGTCGTGCCAAATGACCATGACCTGCGACTCAGGATCATGTACGAGTATCATGATGCCCCGACTGCGGGACATCTCGGACGTGAGAAGACTTACGTCCTTCTCACGCGCGACTTCTACTGGCACCACCAGTATAAGTGGGTGCGCAAGTACATCCGTGCTTGCGAGGTATGCCAACGCGTAAAGCCTGCGCCATTCGCGCAGGCTCCACTGCAATCACTACCGACTCCGTCGGAGTGTTGGAAGTCCATGTCTTTGGACTTCATCTTTGGTCTTCCCCCGGACAGCGGAGGGAATACCGGTGTTGTGGTCTTCGTCGACCGCTTCAGCAAGATGGTACATCTTGCTGCGGTGCCGGCAGAAGTGACCGCGAAGCAGACGGCCCGTCTGTTCGTCGACATGGTGTTCAAACACCATGGCATGCCGACCGACATCGTGTCGGACAGAGACCCGCGCTTCACAGCGCACCTGTGGCAAGAAGTGTTTACACTTCTTGGGAGCCAGCTTTCCATGTCGACTGCGGATCATCCGCAGACGGACGGTCAAACCGAGCGCGTGAATCGCGTGCTCGTCGATATGTTGAAGAGCTACGCTCACTCGTTCCAATAC OLD KEY: ACGGACGGTCAAACCGAGCGCGTGAATCGCGTGCT NEW KEY: ATATGTTGAAGAGCTACGCTCACTCGTTCCAATAC ........ _A_ X0X00000XX0X000X00000X00000000XX0X0000X000X0000009000X000090X1000000X00XX0X __76__ ........ _T_ 0X0X0XX0000000X0000X000X00XX0000X00X00000000X029X09000X0000000XX90000X00070 __76__ ........ _G_ 0000X00X00X0X0000X0000000X0000000000XX0X0X0X0X000100X00XX01X09000X000000000 __76__ ........ _C_ 0000000000000X00X0X0X0X0X000XX0000X00000X0000081000X00000X00000010XX00X0030 __76__ ........ _N_ 000000000000000000000000000000000000000000000000000000000000000000000000000 __76__ ........ ALL wwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwvvuutttssrrqqqppool __76__ ******** *** ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^**************************************** __76__ ######## CNS ATATGTTGAAGAGCTACGCTCACTCGTTCCAATACTGGAGCGAGTGctTatCGATGGCaGAgTTtGCCATCAAtA __76__ ######## QLT XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX++X++XXXXXXX+XX+XX+XXXXXXXX@X __76__ >CONSENSUS__76__ Length: 3044 [gain: 40] ATGGCGTCGAGGTGACGAAGGCGTGTCAACTCCGGGAGTTGACGCTGCAAACAGTGCGGACGGTTGCAAACGTACCGCACTGACGCAATTTGCATGCTGTCGTGCAGCCGGGCTGCACGACGAAGCGCCATGCGATCAAGCCGGGCTTGATATCGCGCGCCCGCAGACAGGGTCTGCCGGCGAAGGGACACATTACCGTGCAGCCGGGCTGCACGAAGGAAAATGCGGTCAAGCCGGGCTTGATACCGCGCGCCCGCGGACAGGGTCCGCCGGCGAACGACTGTCCACGGCCGGGCCTGGACCAGAAGAACAACTGTGCGGAGCCGGGCTCCGCACAACAAGAAGACGGCGCAAGCGGAAAACGCTGCGCAAGTCTCGGTCCGGGACCGAGACGCAACAAGAGCAGTCTGCTGGGCAGACTGCGGCGGTGACGCCGAATGTCAAGACGCTAAGCGTCTTGACGCGCACCGATACTGGATTCCAGTATCGTGACATGGAACTCGCTAGTCCTCCGACGACGGCGTCGGAGTTGACTTCGCTTCCAGCCATGAGCTGGAAGCGCTTCACGCGCGACTTGCACGATGGACGCATCGAGCAAGTCTGCGTTCTTTCGGACAGCGAAAGAACGGAGAGCGAGAGCGAAGAGCTGAGGCAGCTCTTCATGGGAAGTACCACTGAGAGTGAAGACACTCTCAGTGCGAAGACGAAGCGAGAGCGCTTCGAGGAACAAGGTTGGGACTCGCTGAAGTCGAGTCCCTATTACGAATTGTTGAGGGAGTACAAAGACGTACTCCCGGAAGAGATTCCTGCGGAGCTTCCGCAGGATAAGGGCATTCAGCACGAGATTGATCTCGTGCCGGGCACGAAGTACTGTGTCACGCGGCAGTGGCCACTGCCGCGAGAGCAAGTGAAAGCGATCGACGACTTCTTTGAAAGTCGTCGTAAAGCAGGACAAGTGCGGGAATCAAAGTCCCCGCACAGTGCTCCGACGTTCTGTGTCAAGAAGCCACAGGGCGGATGGCGCATCGTTCATGCCTACAACAAGCTGAACGATGCGACGGTACCGGCGCAGACGCCGATACCGCGAAAAGATGTTATCATCGATTCGATGGCCGGGAGCACCGTTTACAGTGCTCTCGACTTGCGAGATGGATTTTATCAAATCCTAATGCGTGAGAGCGATATCCCTCTCACGGCAGTGAGCACGCCAAGCGGCATGCTCTGGGAATGGCTAGTAATGCCACAGGGGCTTAAGAACGCCCCTGCGACTTTCAACAGGTGCGTGACGCACTTGTTGCGCTCGGTGCGCGACTTCGCACCGAGCTACTTCGATGATGTATTCATCCACAGCCGGGCTGTGGACGGGAAGACCGACGTAGAGATGCACAGGGTGCATCTCCGGAAGCTACTTGAGCTTATGCGAAAGCATAAGCTCTACGCGAACCTGAAGAAGTGTATCTTCGGGGCGAGCGAGATACCCGTCCTCGGGTGTCTCGTAGGGAAGAATGGTGTTCGCCCTGACCCGGAAAAGGTCAGAGTGATCAATGAATGGCCAACGCCTTCAAGTGTCAAGGAACTGAGGCAGTTCCTTGGCTTGGCCACGTACTTGTGCAAGTACGTGGAGGATTATGCGGGCAAGATCCGCCCGCTGTCACAGCTTCTTAAGAAAGAAGCTGTGTGGAATTGGACACCCGATTGCCAAAAGGCATTCGATGCAGTCAAGCGGGGCTTGACTGAGGCGCCGATCTTGGCAGTGGCTGACCAAGATCGCCCATTTCACGTAGTGTGTGACGCATCCGATTTCGCGATCGGATGCGCGTTGATGCAGCACGATCACGAGGGCCGTGATCGTGTCGTCTACTACCAATCGCGTCAGCTGAAGCCAGCTGAGCGCAACTATCCGGTGCATGACAAGGAACTCCTTGCCATGAAGTATGCACTCGCAAAGTTCCGAGTGTACTTGCTTGGGAGTAGACCATTTGTGGTCTACACCGACCATGCTTCACTGCGCACCGCAGTGAAGTCGCCACACATTTCACAAAGAATGGCGAGATGGCTCTCATTCTTTGCGGAGTATAACTTCCGGGTCGAATACAAACCCGGAAGATTGAACGTGGTGGCCGACGCGTTATCACGTCGGCCGGACTATGCAGAAGCTGTTGACGTCAATGCCATTGACGCCATGCGATCGAGCAAACCCACATCATCTCTGTTGGATGATGTGAAGGCCGCGTACGCGCACGACGCGGACGCGAAGCTCTTGCTGGCCTATGGCACAGCGCCTTCTGACAAGTCCCGTCAGAAGCTGCCCAAGCACCTTCGAGCGCGTGCACACCGCTTTCGTGTGCACGACGGACTACTGCTTTACAATGCAGTCGACGACAACGCGGATCGCGTTGTCGTGCCAAATGACCATGACCTGCGACTCAGGATCATGTACGAGTATCATGATGCCCCGACTGCGGGACATCTCGGACGTGAGAAGACTTACGTCCTTCTCACGCGCGACTTCTACTGGCACCACCAGTATAAGTGGGTGCGCAAGTACATCCGTGCTTGCGAGGTATGCCAACGCGTAAAGCCTGCGCCATTCGCGCAGGCTCCACTGCAATCACTACCGACTCCGTCGGAGTGTTGGAAGTCCATGTCTTTGGACTTCATCTTTGGTCTTCCCCCGGACAGCGGAGGGAATACCGGTGTTGTGGTCTTCGTCGACCGCTTCAGCAAGATGGTACATCTTGCTGCGGTGCCGGCAGAAGTGACCGCGAAGCAGACGGCCCGTCTGTTCGTCGACATGGTGTTCAAACACCATGGCATGCCGACCGACATCGTGTCGGACAGAGACCCGCGCTTCACAGCGCACCTGTGGCAAGAAGTGTTTACACTTCTTGGGAGCCAGCTTTCCATGTCGACTGCGGATCATCCGCAGACGGACGGTCAAACCGAGCGCGTGAATCGCGTGCTCGTCGATATGTTGAAGAGCTACGCTCACTCGTTCCAATACTGGAGCGAGTGCTTATCGATGGCAGAGTTTGCCATCAATA OLD KEY: ATATGTTGAAGAGCTACGCTCACTCGTTCCAATAC NEW KEY: CGAGTGCTTATCGATGGCAGAGTTTGCCATCAATA ........ _A_ 00X000000X000X0000X0X0000000X00XX0XX000X0000X0000000X010000X0X0X0000000X001 __77__ ........ _T_ 0000X00XX0X000X0000000XXX0000X000X000X000X000X000X0000000000X000000XX1X0109 __77__ ........ _G_ 0X0X0X000000X00XX00X0X000X00000000000000X0X000X0000X000XXX00000000X00000090 __77__ ........ _C_ X00000X0000X00000X00000000XX00X00000X0X0000X000XX0X00X8000X000X0XX000900900 __77__ ........ _N_ 000000000000000000000000000000000000000000000000000000000000000000000000000 __77__ ........ ALL wwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwvvvuuttttssssrrqqqppooookigc __77__ ******** *** ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^**************************************** __77__ ######## CNS CGAGTGCTTATCGATGGCAGAGTTTGCCATCAATAACTCAGTGCATGCCTCGACcGGGCATACACCGTTcTAcgt __77__ ######## QLT XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX+XXXXXXXXXXXXXX+XX+++ __77__ >CONSENSUS__77__ Length: 3084 [gain: 40] ATGGCGTCGAGGTGACGAAGGCGTGTCAACTCCGGGAGTTGACGCTGCAAACAGTGCGGACGGTTGCAAACGTACCGCACTGACGCAATTTGCATGCTGTCGTGCAGCCGGGCTGCACGACGAAGCGCCATGCGATCAAGCCGGGCTTGATATCGCGCGCCCGCAGACAGGGTCTGCCGGCGAAGGGACACATTACCGTGCAGCCGGGCTGCACGAAGGAAAATGCGGTCAAGCCGGGCTTGATACCGCGCGCCCGCGGACAGGGTCCGCCGGCGAACGACTGTCCACGGCCGGGCCTGGACCAGAAGAACAACTGTGCGGAGCCGGGCTCCGCACAACAAGAAGACGGCGCAAGCGGAAAACGCTGCGCAAGTCTCGGTCCGGGACCGAGACGCAACAAGAGCAGTCTGCTGGGCAGACTGCGGCGGTGACGCCGAATGTCAAGACGCTAAGCGTCTTGACGCGCACCGATACTGGATTCCAGTATCGTGACATGGAACTCGCTAGTCCTCCGACGACGGCGTCGGAGTTGACTTCGCTTCCAGCCATGAGCTGGAAGCGCTTCACGCGCGACTTGCACGATGGACGCATCGAGCAAGTCTGCGTTCTTTCGGACAGCGAAAGAACGGAGAGCGAGAGCGAAGAGCTGAGGCAGCTCTTCATGGGAAGTACCACTGAGAGTGAAGACACTCTCAGTGCGAAGACGAAGCGAGAGCGCTTCGAGGAACAAGGTTGGGACTCGCTGAAGTCGAGTCCCTATTACGAATTGTTGAGGGAGTACAAAGACGTACTCCCGGAAGAGATTCCTGCGGAGCTTCCGCAGGATAAGGGCATTCAGCACGAGATTGATCTCGTGCCGGGCACGAAGTACTGTGTCACGCGGCAGTGGCCACTGCCGCGAGAGCAAGTGAAAGCGATCGACGACTTCTTTGAAAGTCGTCGTAAAGCAGGACAAGTGCGGGAATCAAAGTCCCCGCACAGTGCTCCGACGTTCTGTGTCAAGAAGCCACAGGGCGGATGGCGCATCGTTCATGCCTACAACAAGCTGAACGATGCGACGGTACCGGCGCAGACGCCGATACCGCGAAAAGATGTTATCATCGATTCGATGGCCGGGAGCACCGTTTACAGTGCTCTCGACTTGCGAGATGGATTTTATCAAATCCTAATGCGTGAGAGCGATATCCCTCTCACGGCAGTGAGCACGCCAAGCGGCATGCTCTGGGAATGGCTAGTAATGCCACAGGGGCTTAAGAACGCCCCTGCGACTTTCAACAGGTGCGTGACGCACTTGTTGCGCTCGGTGCGCGACTTCGCACCGAGCTACTTCGATGATGTATTCATCCACAGCCGGGCTGTGGACGGGAAGACCGACGTAGAGATGCACAGGGTGCATCTCCGGAAGCTACTTGAGCTTATGCGAAAGCATAAGCTCTACGCGAACCTGAAGAAGTGTATCTTCGGGGCGAGCGAGATACCCGTCCTCGGGTGTCTCGTAGGGAAGAATGGTGTTCGCCCTGACCCGGAAAAGGTCAGAGTGATCAATGAATGGCCAACGCCTTCAAGTGTCAAGGAACTGAGGCAGTTCCTTGGCTTGGCCACGTACTTGTGCAAGTACGTGGAGGATTATGCGGGCAAGATCCGCCCGCTGTCACAGCTTCTTAAGAAAGAAGCTGTGTGGAATTGGACACCCGATTGCCAAAAGGCATTCGATGCAGTCAAGCGGGGCTTGACTGAGGCGCCGATCTTGGCAGTGGCTGACCAAGATCGCCCATTTCACGTAGTGTGTGACGCATCCGATTTCGCGATCGGATGCGCGTTGATGCAGCACGATCACGAGGGCCGTGATCGTGTCGTCTACTACCAATCGCGTCAGCTGAAGCCAGCTGAGCGCAACTATCCGGTGCATGACAAGGAACTCCTTGCCATGAAGTATGCACTCGCAAAGTTCCGAGTGTACTTGCTTGGGAGTAGACCATTTGTGGTCTACACCGACCATGCTTCACTGCGCACCGCAGTGAAGTCGCCACACATTTCACAAAGAATGGCGAGATGGCTCTCATTCTTTGCGGAGTATAACTTCCGGGTCGAATACAAACCCGGAAGATTGAACGTGGTGGCCGACGCGTTATCACGTCGGCCGGACTATGCAGAAGCTGTTGACGTCAATGCCATTGACGCCATGCGATCGAGCAAACCCACATCATCTCTGTTGGATGATGTGAAGGCCGCGTACGCGCACGACGCGGACGCGAAGCTCTTGCTGGCCTATGGCACAGCGCCTTCTGACAAGTCCCGTCAGAAGCTGCCCAAGCACCTTCGAGCGCGTGCACACCGCTTTCGTGTGCACGACGGACTACTGCTTTACAATGCAGTCGACGACAACGCGGATCGCGTTGTCGTGCCAAATGACCATGACCTGCGACTCAGGATCATGTACGAGTATCATGATGCCCCGACTGCGGGACATCTCGGACGTGAGAAGACTTACGTCCTTCTCACGCGCGACTTCTACTGGCACCACCAGTATAAGTGGGTGCGCAAGTACATCCGTGCTTGCGAGGTATGCCAACGCGTAAAGCCTGCGCCATTCGCGCAGGCTCCACTGCAATCACTACCGACTCCGTCGGAGTGTTGGAAGTCCATGTCTTTGGACTTCATCTTTGGTCTTCCCCCGGACAGCGGAGGGAATACCGGTGTTGTGGTCTTCGTCGACCGCTTCAGCAAGATGGTACATCTTGCTGCGGTGCCGGCAGAAGTGACCGCGAAGCAGACGGCCCGTCTGTTCGTCGACATGGTGTTCAAACACCATGGCATGCCGACCGACATCGTGTCGGACAGAGACCCGCGCTTCACAGCGCACCTGTGGCAAGAAGTGTTTACACTTCTTGGGAGCCAGCTTTCCATGTCGACTGCGGATCATCCGCAGACGGACGGTCAAACCGAGCGCGTGAATCGCGTGCTCGTCGATATGTTGAAGAGCTACGCTCACTCGTTCCAATACTGGAGCGAGTGCTTATCGATGGCAGAGTTTGCCATCAATAACTCAGTGCATGCCTCGACCGGGCATACACCGTTCTACGT OLD KEY: CGAGTGCTTATCGATGGCAGAGTTTGCCATCAATA NEW KEY: GTGCATGCCTCGACCGGGCATACACCGTTCTACGT ........ _A_ 0000X0000000X000000X0X0X0000000X0000XX0000X000000X000X000008000X0000X00000X __78__ ........ _T_ 0X000X000X0000000000X000000XX0X000X000X0000X000000X0000060X000000XXX00X0000 __78__ ........ _G_ X0X000X0000X000XXX00000000X000000X0X000X0000X0X90000000X000000X0X0000000XX0 __78__ ........ _C_ 000X000XX0X00XX000X000X0XX000X00X0000000XX000X00X00XX0X04X01XX0000000X0X000 __78__ ........ _N_ 000000000000000000000000000000000000000000000000000000000000000000000000000 __78__ ........ ALL OOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOwwwwwwwwwwwwwwwwwvvuutssrqqppolj __78__ ******** *** ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^**************************************** __78__ ######## CNS GTGCATGCCTCGACCGGGCATACACCGTTCTACGTGAATGCCATGCGgCATCCACGtCTaCCGAGTTTACTCGGA __78__ ######## QLT XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX+XXXXXXXX!XX+XXXXXXXXXXXXXXX __78__ >CONSENSUS__78__ Length: 3124 [gain: 40] ATGGCGTCGAGGTGACGAAGGCGTGTCAACTCCGGGAGTTGACGCTGCAAACAGTGCGGACGGTTGCAAACGTACCGCACTGACGCAATTTGCATGCTGTCGTGCAGCCGGGCTGCACGACGAAGCGCCATGCGATCAAGCCGGGCTTGATATCGCGCGCCCGCAGACAGGGTCTGCCGGCGAAGGGACACATTACCGTGCAGCCGGGCTGCACGAAGGAAAATGCGGTCAAGCCGGGCTTGATACCGCGCGCCCGCGGACAGGGTCCGCCGGCGAACGACTGTCCACGGCCGGGCCTGGACCAGAAGAACAACTGTGCGGAGCCGGGCTCCGCACAACAAGAAGACGGCGCAAGCGGAAAACGCTGCGCAAGTCTCGGTCCGGGACCGAGACGCAACAAGAGCAGTCTGCTGGGCAGACTGCGGCGGTGACGCCGAATGTCAAGACGCTAAGCGTCTTGACGCGCACCGATACTGGATTCCAGTATCGTGACATGGAACTCGCTAGTCCTCCGACGACGGCGTCGGAGTTGACTTCGCTTCCAGCCATGAGCTGGAAGCGCTTCACGCGCGACTTGCACGATGGACGCATCGAGCAAGTCTGCGTTCTTTCGGACAGCGAAAGAACGGAGAGCGAGAGCGAAGAGCTGAGGCAGCTCTTCATGGGAAGTACCACTGAGAGTGAAGACACTCTCAGTGCGAAGACGAAGCGAGAGCGCTTCGAGGAACAAGGTTGGGACTCGCTGAAGTCGAGTCCCTATTACGAATTGTTGAGGGAGTACAAAGACGTACTCCCGGAAGAGATTCCTGCGGAGCTTCCGCAGGATAAGGGCATTCAGCACGAGATTGATCTCGTGCCGGGCACGAAGTACTGTGTCACGCGGCAGTGGCCACTGCCGCGAGAGCAAGTGAAAGCGATCGACGACTTCTTTGAAAGTCGTCGTAAAGCAGGACAAGTGCGGGAATCAAAGTCCCCGCACAGTGCTCCGACGTTCTGTGTCAAGAAGCCACAGGGCGGATGGCGCATCGTTCATGCCTACAACAAGCTGAACGATGCGACGGTACCGGCGCAGACGCCGATACCGCGAAAAGATGTTATCATCGATTCGATGGCCGGGAGCACCGTTTACAGTGCTCTCGACTTGCGAGATGGATTTTATCAAATCCTAATGCGTGAGAGCGATATCCCTCTCACGGCAGTGAGCACGCCAAGCGGCATGCTCTGGGAATGGCTAGTAATGCCACAGGGGCTTAAGAACGCCCCTGCGACTTTCAACAGGTGCGTGACGCACTTGTTGCGCTCGGTGCGCGACTTCGCACCGAGCTACTTCGATGATGTATTCATCCACAGCCGGGCTGTGGACGGGAAGACCGACGTAGAGATGCACAGGGTGCATCTCCGGAAGCTACTTGAGCTTATGCGAAAGCATAAGCTCTACGCGAACCTGAAGAAGTGTATCTTCGGGGCGAGCGAGATACCCGTCCTCGGGTGTCTCGTAGGGAAGAATGGTGTTCGCCCTGACCCGGAAAAGGTCAGAGTGATCAATGAATGGCCAACGCCTTCAAGTGTCAAGGAACTGAGGCAGTTCCTTGGCTTGGCCACGTACTTGTGCAAGTACGTGGAGGATTATGCGGGCAAGATCCGCCCGCTGTCACAGCTTCTTAAGAAAGAAGCTGTGTGGAATTGGACACCCGATTGCCAAAAGGCATTCGATGCAGTCAAGCGGGGCTTGACTGAGGCGCCGATCTTGGCAGTGGCTGACCAAGATCGCCCATTTCACGTAGTGTGTGACGCATCCGATTTCGCGATCGGATGCGCGTTGATGCAGCACGATCACGAGGGCCGTGATCGTGTCGTCTACTACCAATCGCGTCAGCTGAAGCCAGCTGAGCGCAACTATCCGGTGCATGACAAGGAACTCCTTGCCATGAAGTATGCACTCGCAAAGTTCCGAGTGTACTTGCTTGGGAGTAGACCATTTGTGGTCTACACCGACCATGCTTCACTGCGCACCGCAGTGAAGTCGCCACACATTTCACAAAGAATGGCGAGATGGCTCTCATTCTTTGCGGAGTATAACTTCCGGGTCGAATACAAACCCGGAAGATTGAACGTGGTGGCCGACGCGTTATCACGTCGGCCGGACTATGCAGAAGCTGTTGACGTCAATGCCATTGACGCCATGCGATCGAGCAAACCCACATCATCTCTGTTGGATGATGTGAAGGCCGCGTACGCGCACGACGCGGACGCGAAGCTCTTGCTGGCCTATGGCACAGCGCCTTCTGACAAGTCCCGTCAGAAGCTGCCCAAGCACCTTCGAGCGCGTGCACACCGCTTTCGTGTGCACGACGGACTACTGCTTTACAATGCAGTCGACGACAACGCGGATCGCGTTGTCGTGCCAAATGACCATGACCTGCGACTCAGGATCATGTACGAGTATCATGATGCCCCGACTGCGGGACATCTCGGACGTGAGAAGACTTACGTCCTTCTCACGCGCGACTTCTACTGGCACCACCAGTATAAGTGGGTGCGCAAGTACATCCGTGCTTGCGAGGTATGCCAACGCGTAAAGCCTGCGCCATTCGCGCAGGCTCCACTGCAATCACTACCGACTCCGTCGGAGTGTTGGAAGTCCATGTCTTTGGACTTCATCTTTGGTCTTCCCCCGGACAGCGGAGGGAATACCGGTGTTGTGGTCTTCGTCGACCGCTTCAGCAAGATGGTACATCTTGCTGCGGTGCCGGCAGAAGTGACCGCGAAGCAGACGGCCCGTCTGTTCGTCGACATGGTGTTCAAACACCATGGCATGCCGACCGACATCGTGTCGGACAGAGACCCGCGCTTCACAGCGCACCTGTGGCAAGAAGTGTTTACACTTCTTGGGAGCCAGCTTTCCATGTCGACTGCGGATCATCCGCAGACGGACGGTCAAACCGAGCGCGTGAATCGCGTGCTCGTCGATATGTTGAAGAGCTACGCTCACTCGTTCCAATACTGGAGCGAGTGCTTATCGATGGCAGAGTTTGCCATCAATAACTCAGTGCATGCCTCGACCGGGCATACACCGTTCTACGTGAATGCCATGCGGCATCCACGTCTACCGAGTTTACTCGGA OLD KEY: GTGCATGCCTCGACCGGGCATACACCGTTCTACGT NEW KEY: CCATGCGGCATCCACGTCTACCGAGTTTACTCGGA ........ _A_ 00X000000X000X00000X000X0000X00000X00090000000090000XX000000090090009009000 __79__ ........ _T_ 000X000000X00000X0X000000XXX00X00000X00X000X000009XX000X0000000009090000090 __79__ ........ _G_ 0000X0XX0000000X000000X0X0000000XX0X0X00XX000000000000X0XXXXX1XX00000090109 __79__ ........ _C_ XX000X00X00XX0X00X00XX0000000X0X0000000000X0XXX0X00000000000000000900901900 __79__ ........ _N_ 000000000000000000000000000000000000000000000000000000000000000000000000000 __79__ ........ ALL wwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwvvuuutttsssrrrqqqpponkjhd __79__ ******** *** ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^**************************************** __79__ ######## CNS CCATGCGGCATCCACGTCTACCGAGTTTACTCGGAGTGaTGGCTCCCaCtTTAAGTGGGGGaGGatctacgactg __79__ ######## QLT XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX+XXXXXXXX+X+XXXXXXXXXXX+XX+++++++++++ __79__ >CONSENSUS__79__ Length: 3164 [gain: 40] ATGGCGTCGAGGTGACGAAGGCGTGTCAACTCCGGGAGTTGACGCTGCAAACAGTGCGGACGGTTGCAAACGTACCGCACTGACGCAATTTGCATGCTGTCGTGCAGCCGGGCTGCACGACGAAGCGCCATGCGATCAAGCCGGGCTTGATATCGCGCGCCCGCAGACAGGGTCTGCCGGCGAAGGGACACATTACCGTGCAGCCGGGCTGCACGAAGGAAAATGCGGTCAAGCCGGGCTTGATACCGCGCGCCCGCGGACAGGGTCCGCCGGCGAACGACTGTCCACGGCCGGGCCTGGACCAGAAGAACAACTGTGCGGAGCCGGGCTCCGCACAACAAGAAGACGGCGCAAGCGGAAAACGCTGCGCAAGTCTCGGTCCGGGACCGAGACGCAACAAGAGCAGTCTGCTGGGCAGACTGCGGCGGTGACGCCGAATGTCAAGACGCTAAGCGTCTTGACGCGCACCGATACTGGATTCCAGTATCGTGACATGGAACTCGCTAGTCCTCCGACGACGGCGTCGGAGTTGACTTCGCTTCCAGCCATGAGCTGGAAGCGCTTCACGCGCGACTTGCACGATGGACGCATCGAGCAAGTCTGCGTTCTTTCGGACAGCGAAAGAACGGAGAGCGAGAGCGAAGAGCTGAGGCAGCTCTTCATGGGAAGTACCACTGAGAGTGAAGACACTCTCAGTGCGAAGACGAAGCGAGAGCGCTTCGAGGAACAAGGTTGGGACTCGCTGAAGTCGAGTCCCTATTACGAATTGTTGAGGGAGTACAAAGACGTACTCCCGGAAGAGATTCCTGCGGAGCTTCCGCAGGATAAGGGCATTCAGCACGAGATTGATCTCGTGCCGGGCACGAAGTACTGTGTCACGCGGCAGTGGCCACTGCCGCGAGAGCAAGTGAAAGCGATCGACGACTTCTTTGAAAGTCGTCGTAAAGCAGGACAAGTGCGGGAATCAAAGTCCCCGCACAGTGCTCCGACGTTCTGTGTCAAGAAGCCACAGGGCGGATGGCGCATCGTTCATGCCTACAACAAGCTGAACGATGCGACGGTACCGGCGCAGACGCCGATACCGCGAAAAGATGTTATCATCGATTCGATGGCCGGGAGCACCGTTTACAGTGCTCTCGACTTGCGAGATGGATTTTATCAAATCCTAATGCGTGAGAGCGATATCCCTCTCACGGCAGTGAGCACGCCAAGCGGCATGCTCTGGGAATGGCTAGTAATGCCACAGGGGCTTAAGAACGCCCCTGCGACTTTCAACAGGTGCGTGACGCACTTGTTGCGCTCGGTGCGCGACTTCGCACCGAGCTACTTCGATGATGTATTCATCCACAGCCGGGCTGTGGACGGGAAGACCGACGTAGAGATGCACAGGGTGCATCTCCGGAAGCTACTTGAGCTTATGCGAAAGCATAAGCTCTACGCGAACCTGAAGAAGTGTATCTTCGGGGCGAGCGAGATACCCGTCCTCGGGTGTCTCGTAGGGAAGAATGGTGTTCGCCCTGACCCGGAAAAGGTCAGAGTGATCAATGAATGGCCAACGCCTTCAAGTGTCAAGGAACTGAGGCAGTTCCTTGGCTTGGCCACGTACTTGTGCAAGTACGTGGAGGATTATGCGGGCAAGATCCGCCCGCTGTCACAGCTTCTTAAGAAAGAAGCTGTGTGGAATTGGACACCCGATTGCCAAAAGGCATTCGATGCAGTCAAGCGGGGCTTGACTGAGGCGCCGATCTTGGCAGTGGCTGACCAAGATCGCCCATTTCACGTAGTGTGTGACGCATCCGATTTCGCGATCGGATGCGCGTTGATGCAGCACGATCACGAGGGCCGTGATCGTGTCGTCTACTACCAATCGCGTCAGCTGAAGCCAGCTGAGCGCAACTATCCGGTGCATGACAAGGAACTCCTTGCCATGAAGTATGCACTCGCAAAGTTCCGAGTGTACTTGCTTGGGAGTAGACCATTTGTGGTCTACACCGACCATGCTTCACTGCGCACCGCAGTGAAGTCGCCACACATTTCACAAAGAATGGCGAGATGGCTCTCATTCTTTGCGGAGTATAACTTCCGGGTCGAATACAAACCCGGAAGATTGAACGTGGTGGCCGACGCGTTATCACGTCGGCCGGACTATGCAGAAGCTGTTGACGTCAATGCCATTGACGCCATGCGATCGAGCAAACCCACATCATCTCTGTTGGATGATGTGAAGGCCGCGTACGCGCACGACGCGGACGCGAAGCTCTTGCTGGCCTATGGCACAGCGCCTTCTGACAAGTCCCGTCAGAAGCTGCCCAAGCACCTTCGAGCGCGTGCACACCGCTTTCGTGTGCACGACGGACTACTGCTTTACAATGCAGTCGACGACAACGCGGATCGCGTTGTCGTGCCAAATGACCATGACCTGCGACTCAGGATCATGTACGAGTATCATGATGCCCCGACTGCGGGACATCTCGGACGTGAGAAGACTTACGTCCTTCTCACGCGCGACTTCTACTGGCACCACCAGTATAAGTGGGTGCGCAAGTACATCCGTGCTTGCGAGGTATGCCAACGCGTAAAGCCTGCGCCATTCGCGCAGGCTCCACTGCAATCACTACCGACTCCGTCGGAGTGTTGGAAGTCCATGTCTTTGGACTTCATCTTTGGTCTTCCCCCGGACAGCGGAGGGAATACCGGTGTTGTGGTCTTCGTCGACCGCTTCAGCAAGATGGTACATCTTGCTGCGGTGCCGGCAGAAGTGACCGCGAAGCAGACGGCCCGTCTGTTCGTCGACATGGTGTTCAAACACCATGGCATGCCGACCGACATCGTGTCGGACAGAGACCCGCGCTTCACAGCGCACCTGTGGCAAGAAGTGTTTACACTTCTTGGGAGCCAGCTTTCCATGTCGACTGCGGATCATCCGCAGACGGACGGTCAAACCGAGCGCGTGAATCGCGTGCTCGTCGATATGTTGAAGAGCTACGCTCACTCGTTCCAATACTGGAGCGAGTGCTTATCGATGGCAGAGTTTGCCATCAATAACTCAGTGCATGCCTCGACCGGGCATACACCGTTCTACGTGAATGCCATGCGGCATCCACGTCTACCGAGTTTACTCGGAGTGATGGCTCCCACTTTAAGTGGGGGAGGATCTACGACTG OLD KEY: CCATGCGGCATCCACGTCTACCGAGTTTACTCGGA NEW KEY: GGCTCCCACTTTAAGTGGGGGAGGATCTACGACTG ........ _A_ 0000000X0000XX0000000X00X000X00X0000XX0X0X00X00000X1XXX90000009090000090900 __80__ ........ _T_ 000X00000XXX000X000000000X0X00000X00009000000010000000000000800000890000007 __80__ ........ _G_ XX000000000000X0XXXXX0XX000000X000X0000000X00X00X00900010090090000009000092 __80__ ........ _C_ 00X0XXX0X00000000000000000X00X00X00X0010X00X009X0X000000XX0X200919200919100 __80__ ........ _N_ 000000000000000000000000000000000000000000000000000000000000000000000000000 __80__ ........ ALL OOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOwwwwwwwwwwwwwwwwwwwvuuttssqqpponk __80__ ******** *** ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^**************************************** __80__ ######## CNS GGCTCCCACTTTAAGTGGGGGAGGATCTACGACTGCAAtACAGCAGcCGCAgAAAaCCgCtgacacttgcacagt __80__ ######## QLT XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX+XXXXXXX+XXXX+XXX+XX+X++++++++++++++@ __80__ >CONSENSUS__80__ Length: 3204 [gain: 40] ATGGCGTCGAGGTGACGAAGGCGTGTCAACTCCGGGAGTTGACGCTGCAAACAGTGCGGACGGTTGCAAACGTACCGCACTGACGCAATTTGCATGCTGTCGTGCAGCCGGGCTGCACGACGAAGCGCCATGCGATCAAGCCGGGCTTGATATCGCGCGCCCGCAGACAGGGTCTGCCGGCGAAGGGACACATTACCGTGCAGCCGGGCTGCACGAAGGAAAATGCGGTCAAGCCGGGCTTGATACCGCGCGCCCGCGGACAGGGTCCGCCGGCGAACGACTGTCCACGGCCGGGCCTGGACCAGAAGAACAACTGTGCGGAGCCGGGCTCCGCACAACAAGAAGACGGCGCAAGCGGAAAACGCTGCGCAAGTCTCGGTCCGGGACCGAGACGCAACAAGAGCAGTCTGCTGGGCAGACTGCGGCGGTGACGCCGAATGTCAAGACGCTAAGCGTCTTGACGCGCACCGATACTGGATTCCAGTATCGTGACATGGAACTCGCTAGTCCTCCGACGACGGCGTCGGAGTTGACTTCGCTTCCAGCCATGAGCTGGAAGCGCTTCACGCGCGACTTGCACGATGGACGCATCGAGCAAGTCTGCGTTCTTTCGGACAGCGAAAGAACGGAGAGCGAGAGCGAAGAGCTGAGGCAGCTCTTCATGGGAAGTACCACTGAGAGTGAAGACACTCTCAGTGCGAAGACGAAGCGAGAGCGCTTCGAGGAACAAGGTTGGGACTCGCTGAAGTCGAGTCCCTATTACGAATTGTTGAGGGAGTACAAAGACGTACTCCCGGAAGAGATTCCTGCGGAGCTTCCGCAGGATAAGGGCATTCAGCACGAGATTGATCTCGTGCCGGGCACGAAGTACTGTGTCACGCGGCAGTGGCCACTGCCGCGAGAGCAAGTGAAAGCGATCGACGACTTCTTTGAAAGTCGTCGTAAAGCAGGACAAGTGCGGGAATCAAAGTCCCCGCACAGTGCTCCGACGTTCTGTGTCAAGAAGCCACAGGGCGGATGGCGCATCGTTCATGCCTACAACAAGCTGAACGATGCGACGGTACCGGCGCAGACGCCGATACCGCGAAAAGATGTTATCATCGATTCGATGGCCGGGAGCACCGTTTACAGTGCTCTCGACTTGCGAGATGGATTTTATCAAATCCTAATGCGTGAGAGCGATATCCCTCTCACGGCAGTGAGCACGCCAAGCGGCATGCTCTGGGAATGGCTAGTAATGCCACAGGGGCTTAAGAACGCCCCTGCGACTTTCAACAGGTGCGTGACGCACTTGTTGCGCTCGGTGCGCGACTTCGCACCGAGCTACTTCGATGATGTATTCATCCACAGCCGGGCTGTGGACGGGAAGACCGACGTAGAGATGCACAGGGTGCATCTCCGGAAGCTACTTGAGCTTATGCGAAAGCATAAGCTCTACGCGAACCTGAAGAAGTGTATCTTCGGGGCGAGCGAGATACCCGTCCTCGGGTGTCTCGTAGGGAAGAATGGTGTTCGCCCTGACCCGGAAAAGGTCAGAGTGATCAATGAATGGCCAACGCCTTCAAGTGTCAAGGAACTGAGGCAGTTCCTTGGCTTGGCCACGTACTTGTGCAAGTACGTGGAGGATTATGCGGGCAAGATCCGCCCGCTGTCACAGCTTCTTAAGAAAGAAGCTGTGTGGAATTGGACACCCGATTGCCAAAAGGCATTCGATGCAGTCAAGCGGGGCTTGACTGAGGCGCCGATCTTGGCAGTGGCTGACCAAGATCGCCCATTTCACGTAGTGTGTGACGCATCCGATTTCGCGATCGGATGCGCGTTGATGCAGCACGATCACGAGGGCCGTGATCGTGTCGTCTACTACCAATCGCGTCAGCTGAAGCCAGCTGAGCGCAACTATCCGGTGCATGACAAGGAACTCCTTGCCATGAAGTATGCACTCGCAAAGTTCCGAGTGTACTTGCTTGGGAGTAGACCATTTGTGGTCTACACCGACCATGCTTCACTGCGCACCGCAGTGAAGTCGCCACACATTTCACAAAGAATGGCGAGATGGCTCTCATTCTTTGCGGAGTATAACTTCCGGGTCGAATACAAACCCGGAAGATTGAACGTGGTGGCCGACGCGTTATCACGTCGGCCGGACTATGCAGAAGCTGTTGACGTCAATGCCATTGACGCCATGCGATCGAGCAAACCCACATCATCTCTGTTGGATGATGTGAAGGCCGCGTACGCGCACGACGCGGACGCGAAGCTCTTGCTGGCCTATGGCACAGCGCCTTCTGACAAGTCCCGTCAGAAGCTGCCCAAGCACCTTCGAGCGCGTGCACACCGCTTTCGTGTGCACGACGGACTACTGCTTTACAATGCAGTCGACGACAACGCGGATCGCGTTGTCGTGCCAAATGACCATGACCTGCGACTCAGGATCATGTACGAGTATCATGATGCCCCGACTGCGGGACATCTCGGACGTGAGAAGACTTACGTCCTTCTCACGCGCGACTTCTACTGGCACCACCAGTATAAGTGGGTGCGCAAGTACATCCGTGCTTGCGAGGTATGCCAACGCGTAAAGCCTGCGCCATTCGCGCAGGCTCCACTGCAATCACTACCGACTCCGTCGGAGTGTTGGAAGTCCATGTCTTTGGACTTCATCTTTGGTCTTCCCCCGGACAGCGGAGGGAATACCGGTGTTGTGGTCTTCGTCGACCGCTTCAGCAAGATGGTACATCTTGCTGCGGTGCCGGCAGAAGTGACCGCGAAGCAGACGGCCCGTCTGTTCGTCGACATGGTGTTCAAACACCATGGCATGCCGACCGACATCGTGTCGGACAGAGACCCGCGCTTCACAGCGCACCTGTGGCAAGAAGTGTTTACACTTCTTGGGAGCCAGCTTTCCATGTCGACTGCGGATCATCCGCAGACGGACGGTCAAACCGAGCGCGTGAATCGCGTGCTCGTCGATATGTTGAAGAGCTACGCTCACTCGTTCCAATACTGGAGCGAGTGCTTATCGATGGCAGAGTTTGCCATCAATAACTCAGTGCATGCCTCGACCGGGCATACACCGTTCTACGTGAATGCCATGCGGCATCCACGTCTACCGAGTTTACTCGGAGTGATGGCTCCCACTTTAAGTGGGGGAGGATCTACGACTGCAATACAGCAGCCGCAGAAAACCGCTGACACTTGCACAGT OLD KEY: GGCTCCCACTTTAAGTGGGGGAGGATCTACGACTG NEW KEY: CAGCAGCCGCAGAAAACCGCTGACACTTGCACAGT ........ _A_ 0X00X00000X0XXXX000000X0X00000X0X00000X00000XX0XX102X0XXX1090X2090100000080 __81__ ........ _T_ 00000000000000000000X00000XX000000X0X0000X000000080000000000008000809000000 __81__ ........ _G_ 00X00X00X00X000000X00X000000X0000X0X000X00X0000000X800000001000X09100909109 __81__ ........ _C_ X00X00XX0X000000XX0X000X0X000X0X00000X00X00X0090010009000990X00000091090921 __81__ ........ _N_ 000000000000000000000000000000000000000000000000000000000000000000000000000 __81__ ........ ALL wwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwvvvuuuttsssrqqqppoomkjf __81__ ******** *** ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^**************************************** __81__ ######## CNS CAGCAGCCGCAGAAAACCGCTGACACTTGCACAGTGTCAGCTGCAAcAAtGgAcAAAccaCAtGagtctgcgcag __81__ ######## QLT XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX+XX+X+X+XXX+++XX+X+++++++++++ __81__ >CONSENSUS__81__ Length: 3244 [gain: 40] ATGGCGTCGAGGTGACGAAGGCGTGTCAACTCCGGGAGTTGACGCTGCAAACAGTGCGGACGGTTGCAAACGTACCGCACTGACGCAATTTGCATGCTGTCGTGCAGCCGGGCTGCACGACGAAGCGCCATGCGATCAAGCCGGGCTTGATATCGCGCGCCCGCAGACAGGGTCTGCCGGCGAAGGGACACATTACCGTGCAGCCGGGCTGCACGAAGGAAAATGCGGTCAAGCCGGGCTTGATACCGCGCGCCCGCGGACAGGGTCCGCCGGCGAACGACTGTCCACGGCCGGGCCTGGACCAGAAGAACAACTGTGCGGAGCCGGGCTCCGCACAACAAGAAGACGGCGCAAGCGGAAAACGCTGCGCAAGTCTCGGTCCGGGACCGAGACGCAACAAGAGCAGTCTGCTGGGCAGACTGCGGCGGTGACGCCGAATGTCAAGACGCTAAGCGTCTTGACGCGCACCGATACTGGATTCCAGTATCGTGACATGGAACTCGCTAGTCCTCCGACGACGGCGTCGGAGTTGACTTCGCTTCCAGCCATGAGCTGGAAGCGCTTCACGCGCGACTTGCACGATGGACGCATCGAGCAAGTCTGCGTTCTTTCGGACAGCGAAAGAACGGAGAGCGAGAGCGAAGAGCTGAGGCAGCTCTTCATGGGAAGTACCACTGAGAGTGAAGACACTCTCAGTGCGAAGACGAAGCGAGAGCGCTTCGAGGAACAAGGTTGGGACTCGCTGAAGTCGAGTCCCTATTACGAATTGTTGAGGGAGTACAAAGACGTACTCCCGGAAGAGATTCCTGCGGAGCTTCCGCAGGATAAGGGCATTCAGCACGAGATTGATCTCGTGCCGGGCACGAAGTACTGTGTCACGCGGCAGTGGCCACTGCCGCGAGAGCAAGTGAAAGCGATCGACGACTTCTTTGAAAGTCGTCGTAAAGCAGGACAAGTGCGGGAATCAAAGTCCCCGCACAGTGCTCCGACGTTCTGTGTCAAGAAGCCACAGGGCGGATGGCGCATCGTTCATGCCTACAACAAGCTGAACGATGCGACGGTACCGGCGCAGACGCCGATACCGCGAAAAGATGTTATCATCGATTCGATGGCCGGGAGCACCGTTTACAGTGCTCTCGACTTGCGAGATGGATTTTATCAAATCCTAATGCGTGAGAGCGATATCCCTCTCACGGCAGTGAGCACGCCAAGCGGCATGCTCTGGGAATGGCTAGTAATGCCACAGGGGCTTAAGAACGCCCCTGCGACTTTCAACAGGTGCGTGACGCACTTGTTGCGCTCGGTGCGCGACTTCGCACCGAGCTACTTCGATGATGTATTCATCCACAGCCGGGCTGTGGACGGGAAGACCGACGTAGAGATGCACAGGGTGCATCTCCGGAAGCTACTTGAGCTTATGCGAAAGCATAAGCTCTACGCGAACCTGAAGAAGTGTATCTTCGGGGCGAGCGAGATACCCGTCCTCGGGTGTCTCGTAGGGAAGAATGGTGTTCGCCCTGACCCGGAAAAGGTCAGAGTGATCAATGAATGGCCAACGCCTTCAAGTGTCAAGGAACTGAGGCAGTTCCTTGGCTTGGCCACGTACTTGTGCAAGTACGTGGAGGATTATGCGGGCAAGATCCGCCCGCTGTCACAGCTTCTTAAGAAAGAAGCTGTGTGGAATTGGACACCCGATTGCCAAAAGGCATTCGATGCAGTCAAGCGGGGCTTGACTGAGGCGCCGATCTTGGCAGTGGCTGACCAAGATCGCCCATTTCACGTAGTGTGTGACGCATCCGATTTCGCGATCGGATGCGCGTTGATGCAGCACGATCACGAGGGCCGTGATCGTGTCGTCTACTACCAATCGCGTCAGCTGAAGCCAGCTGAGCGCAACTATCCGGTGCATGACAAGGAACTCCTTGCCATGAAGTATGCACTCGCAAAGTTCCGAGTGTACTTGCTTGGGAGTAGACCATTTGTGGTCTACACCGACCATGCTTCACTGCGCACCGCAGTGAAGTCGCCACACATTTCACAAAGAATGGCGAGATGGCTCTCATTCTTTGCGGAGTATAACTTCCGGGTCGAATACAAACCCGGAAGATTGAACGTGGTGGCCGACGCGTTATCACGTCGGCCGGACTATGCAGAAGCTGTTGACGTCAATGCCATTGACGCCATGCGATCGAGCAAACCCACATCATCTCTGTTGGATGATGTGAAGGCCGCGTACGCGCACGACGCGGACGCGAAGCTCTTGCTGGCCTATGGCACAGCGCCTTCTGACAAGTCCCGTCAGAAGCTGCCCAAGCACCTTCGAGCGCGTGCACACCGCTTTCGTGTGCACGACGGACTACTGCTTTACAATGCAGTCGACGACAACGCGGATCGCGTTGTCGTGCCAAATGACCATGACCTGCGACTCAGGATCATGTACGAGTATCATGATGCCCCGACTGCGGGACATCTCGGACGTGAGAAGACTTACGTCCTTCTCACGCGCGACTTCTACTGGCACCACCAGTATAAGTGGGTGCGCAAGTACATCCGTGCTTGCGAGGTATGCCAACGCGTAAAGCCTGCGCCATTCGCGCAGGCTCCACTGCAATCACTACCGACTCCGTCGGAGTGTTGGAAGTCCATGTCTTTGGACTTCATCTTTGGTCTTCCCCCGGACAGCGGAGGGAATACCGGTGTTGTGGTCTTCGTCGACCGCTTCAGCAAGATGGTACATCTTGCTGCGGTGCCGGCAGAAGTGACCGCGAAGCAGACGGCCCGTCTGTTCGTCGACATGGTGTTCAAACACCATGGCATGCCGACCGACATCGTGTCGGACAGAGACCCGCGCTTCACAGCGCACCTGTGGCAAGAAGTGTTTACACTTCTTGGGAGCCAGCTTTCCATGTCGACTGCGGATCATCCGCAGACGGACGGTCAAACCGAGCGCGTGAATCGCGTGCTCGTCGATATGTTGAAGAGCTACGCTCACTCGTTCCAATACTGGAGCGAGTGCTTATCGATGGCAGAGTTTGCCATCAATAACTCAGTGCATGCCTCGACCGGGCATACACCGTTCTACGTGAATGCCATGCGGCATCCACGTCTACCGAGTTTACTCGGAGTGATGGCTCCCACTTTAAGTGGGGGAGGATCTACGACTGCAATACAGCAGCCGCAGAAAACCGCTGACACTTGCACAGTGTCAGCTGCAACAATGGACAAACCACATGAGTCTGCGCAG OLD KEY: CAGCAGCCGCAGAAAACCGCTGACACTTGCACAGT NEW KEY: CTGCAACAATGGACAAACCACATGAGTCTGCGCAG ........ _A_ 0000XX0XX000X0XXX00X0X00X00000000X000000X0X0000000X90XX0X600209X10900900000 __82__ ........ _T_ 0X0000000X000000000000X000X0X0000000000000009002000000000400000000000000016 __82__ ........ _G_ 00X0000000XX00000000000X0X000X0X00XXX0X00X00000000000000009X000019100019992 __82__ ........ _C_ X00X00X000000X000XX0X000000X00X0X0000X0X000X0XX8X901900X00008900800X9091112 __82__ ........ _N_ 000000000000000000000000000000000000000000000000000000000000000000000000000 __82__ ........ ALL wwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwvuuttssrrqqqpponljd __82__ ******** *** ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^**************************************** __82__ ######## CNS CTGCAACAATGGACAAACCACATGAGTCTGCGCAGGGCGCAGACtCCcCcAacAACAagGccaAcgaCcacgggt __82__ ######## QLT XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX+XX+X+X++XXXX!+X+++X+++X++++++! __82__ >CONSENSUS__82__ Length: 3284 [gain: 40] ATGGCGTCGAGGTGACGAAGGCGTGTCAACTCCGGGAGTTGACGCTGCAAACAGTGCGGACGGTTGCAAACGTACCGCACTGACGCAATTTGCATGCTGTCGTGCAGCCGGGCTGCACGACGAAGCGCCATGCGATCAAGCCGGGCTTGATATCGCGCGCCCGCAGACAGGGTCTGCCGGCGAAGGGACACATTACCGTGCAGCCGGGCTGCACGAAGGAAAATGCGGTCAAGCCGGGCTTGATACCGCGCGCCCGCGGACAGGGTCCGCCGGCGAACGACTGTCCACGGCCGGGCCTGGACCAGAAGAACAACTGTGCGGAGCCGGGCTCCGCACAACAAGAAGACGGCGCAAGCGGAAAACGCTGCGCAAGTCTCGGTCCGGGACCGAGACGCAACAAGAGCAGTCTGCTGGGCAGACTGCGGCGGTGACGCCGAATGTCAAGACGCTAAGCGTCTTGACGCGCACCGATACTGGATTCCAGTATCGTGACATGGAACTCGCTAGTCCTCCGACGACGGCGTCGGAGTTGACTTCGCTTCCAGCCATGAGCTGGAAGCGCTTCACGCGCGACTTGCACGATGGACGCATCGAGCAAGTCTGCGTTCTTTCGGACAGCGAAAGAACGGAGAGCGAGAGCGAAGAGCTGAGGCAGCTCTTCATGGGAAGTACCACTGAGAGTGAAGACACTCTCAGTGCGAAGACGAAGCGAGAGCGCTTCGAGGAACAAGGTTGGGACTCGCTGAAGTCGAGTCCCTATTACGAATTGTTGAGGGAGTACAAAGACGTACTCCCGGAAGAGATTCCTGCGGAGCTTCCGCAGGATAAGGGCATTCAGCACGAGATTGATCTCGTGCCGGGCACGAAGTACTGTGTCACGCGGCAGTGGCCACTGCCGCGAGAGCAAGTGAAAGCGATCGACGACTTCTTTGAAAGTCGTCGTAAAGCAGGACAAGTGCGGGAATCAAAGTCCCCGCACAGTGCTCCGACGTTCTGTGTCAAGAAGCCACAGGGCGGATGGCGCATCGTTCATGCCTACAACAAGCTGAACGATGCGACGGTACCGGCGCAGACGCCGATACCGCGAAAAGATGTTATCATCGATTCGATGGCCGGGAGCACCGTTTACAGTGCTCTCGACTTGCGAGATGGATTTTATCAAATCCTAATGCGTGAGAGCGATATCCCTCTCACGGCAGTGAGCACGCCAAGCGGCATGCTCTGGGAATGGCTAGTAATGCCACAGGGGCTTAAGAACGCCCCTGCGACTTTCAACAGGTGCGTGACGCACTTGTTGCGCTCGGTGCGCGACTTCGCACCGAGCTACTTCGATGATGTATTCATCCACAGCCGGGCTGTGGACGGGAAGACCGACGTAGAGATGCACAGGGTGCATCTCCGGAAGCTACTTGAGCTTATGCGAAAGCATAAGCTCTACGCGAACCTGAAGAAGTGTATCTTCGGGGCGAGCGAGATACCCGTCCTCGGGTGTCTCGTAGGGAAGAATGGTGTTCGCCCTGACCCGGAAAAGGTCAGAGTGATCAATGAATGGCCAACGCCTTCAAGTGTCAAGGAACTGAGGCAGTTCCTTGGCTTGGCCACGTACTTGTGCAAGTACGTGGAGGATTATGCGGGCAAGATCCGCCCGCTGTCACAGCTTCTTAAGAAAGAAGCTGTGTGGAATTGGACACCCGATTGCCAAAAGGCATTCGATGCAGTCAAGCGGGGCTTGACTGAGGCGCCGATCTTGGCAGTGGCTGACCAAGATCGCCCATTTCACGTAGTGTGTGACGCATCCGATTTCGCGATCGGATGCGCGTTGATGCAGCACGATCACGAGGGCCGTGATCGTGTCGTCTACTACCAATCGCGTCAGCTGAAGCCAGCTGAGCGCAACTATCCGGTGCATGACAAGGAACTCCTTGCCATGAAGTATGCACTCGCAAAGTTCCGAGTGTACTTGCTTGGGAGTAGACCATTTGTGGTCTACACCGACCATGCTTCACTGCGCACCGCAGTGAAGTCGCCACACATTTCACAAAGAATGGCGAGATGGCTCTCATTCTTTGCGGAGTATAACTTCCGGGTCGAATACAAACCCGGAAGATTGAACGTGGTGGCCGACGCGTTATCACGTCGGCCGGACTATGCAGAAGCTGTTGACGTCAATGCCATTGACGCCATGCGATCGAGCAAACCCACATCATCTCTGTTGGATGATGTGAAGGCCGCGTACGCGCACGACGCGGACGCGAAGCTCTTGCTGGCCTATGGCACAGCGCCTTCTGACAAGTCCCGTCAGAAGCTGCCCAAGCACCTTCGAGCGCGTGCACACCGCTTTCGTGTGCACGACGGACTACTGCTTTACAATGCAGTCGACGACAACGCGGATCGCGTTGTCGTGCCAAATGACCATGACCTGCGACTCAGGATCATGTACGAGTATCATGATGCCCCGACTGCGGGACATCTCGGACGTGAGAAGACTTACGTCCTTCTCACGCGCGACTTCTACTGGCACCACCAGTATAAGTGGGTGCGCAAGTACATCCGTGCTTGCGAGGTATGCCAACGCGTAAAGCCTGCGCCATTCGCGCAGGCTCCACTGCAATCACTACCGACTCCGTCGGAGTGTTGGAAGTCCATGTCTTTGGACTTCATCTTTGGTCTTCCCCCGGACAGCGGAGGGAATACCGGTGTTGTGGTCTTCGTCGACCGCTTCAGCAAGATGGTACATCTTGCTGCGGTGCCGGCAGAAGTGACCGCGAAGCAGACGGCCCGTCTGTTCGTCGACATGGTGTTCAAACACCATGGCATGCCGACCGACATCGTGTCGGACAGAGACCCGCGCTTCACAGCGCACCTGTGGCAAGAAGTGTTTACACTTCTTGGGAGCCAGCTTTCCATGTCGACTGCGGATCATCCGCAGACGGACGGTCAAACCGAGCGCGTGAATCGCGTGCTCGTCGATATGTTGAAGAGCTACGCTCACTCGTTCCAATACTGGAGCGAGTGCTTATCGATGGCAGAGTTTGCCATCAATAACTCAGTGCATGCCTCGACCGGGCATACACCGTTCTACGTGAATGCCATGCGGCATCCACGTCTACCGAGTTTACTCGGAGTGATGGCTCCCACTTTAAGTGGGGGAGGATCTACGACTGCAATACAGCAGCCGCAGAAAACCGCTGACACTTGCACAGTGTCAGCTGCAACAATGGACAAACCACATGAGTCTGCGCAGGGCGCAGACTCCCCCAACAACAAGGCCAACGACCACGGGT OLD KEY: CTGCAACAATGGACAAACCACATGAGTCTGCGCAG NEW KEY: AGACTCCCCCAACAACAAGGCCAACGACCACGGGT ........ _A_ X0X0000000XX0XX0XX0000XX00X00X00000000000X000000X0X0X00009XX0XX00X000X0X000 __83__ ........ _T_ 0000X00000000000000000000000000000X0X00000000000000000000000000000000000000 __83__ ........ _G_ 0X0000000000000000XX00000X00000XXX000X0X00XXX0X00X0000090100X000000X00X0XX0 __83__ ........ _C_ 000X0XXXXX00X00X0000XX00X00XX0X0000X00X0X0000X0X000X0XX0X000000XX0X0X00000X __83__ ........ _N_ 000000000000000000000000000000000000000000000000000000000000000000000000000 __83__ ........ ALL rrrrrrrrrrrrrrrrrrrrrrrrrrrrrrrrrrrrrrrrrrqqqqqqqpppppppooooooooonmlkjihhfd __83__ ******** *** ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^**************************************** __83__ ######## CNS AGACTCCCCCAACAACAAGGCCAACGACCACGGGTCTGCGCAGGGCGCAGACACCgCaAAGAACCACGCAGAGGC __83__ ######## QLT XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX+X+XXXXXXXXXXXXXXXXX __83__ >CONSENSUS__83__ Length: 3324 [gain: 40] ATGGCGTCGAGGTGACGAAGGCGTGTCAACTCCGGGAGTTGACGCTGCAAACAGTGCGGACGGTTGCAAACGTACCGCACTGACGCAATTTGCATGCTGTCGTGCAGCCGGGCTGCACGACGAAGCGCCATGCGATCAAGCCGGGCTTGATATCGCGCGCCCGCAGACAGGGTCTGCCGGCGAAGGGACACATTACCGTGCAGCCGGGCTGCACGAAGGAAAATGCGGTCAAGCCGGGCTTGATACCGCGCGCCCGCGGACAGGGTCCGCCGGCGAACGACTGTCCACGGCCGGGCCTGGACCAGAAGAACAACTGTGCGGAGCCGGGCTCCGCACAACAAGAAGACGGCGCAAGCGGAAAACGCTGCGCAAGTCTCGGTCCGGGACCGAGACGCAACAAGAGCAGTCTGCTGGGCAGACTGCGGCGGTGACGCCGAATGTCAAGACGCTAAGCGTCTTGACGCGCACCGATACTGGATTCCAGTATCGTGACATGGAACTCGCTAGTCCTCCGACGACGGCGTCGGAGTTGACTTCGCTTCCAGCCATGAGCTGGAAGCGCTTCACGCGCGACTTGCACGATGGACGCATCGAGCAAGTCTGCGTTCTTTCGGACAGCGAAAGAACGGAGAGCGAGAGCGAAGAGCTGAGGCAGCTCTTCATGGGAAGTACCACTGAGAGTGAAGACACTCTCAGTGCGAAGACGAAGCGAGAGCGCTTCGAGGAACAAGGTTGGGACTCGCTGAAGTCGAGTCCCTATTACGAATTGTTGAGGGAGTACAAAGACGTACTCCCGGAAGAGATTCCTGCGGAGCTTCCGCAGGATAAGGGCATTCAGCACGAGATTGATCTCGTGCCGGGCACGAAGTACTGTGTCACGCGGCAGTGGCCACTGCCGCGAGAGCAAGTGAAAGCGATCGACGACTTCTTTGAAAGTCGTCGTAAAGCAGGACAAGTGCGGGAATCAAAGTCCCCGCACAGTGCTCCGACGTTCTGTGTCAAGAAGCCACAGGGCGGATGGCGCATCGTTCATGCCTACAACAAGCTGAACGATGCGACGGTACCGGCGCAGACGCCGATACCGCGAAAAGATGTTATCATCGATTCGATGGCCGGGAGCACCGTTTACAGTGCTCTCGACTTGCGAGATGGATTTTATCAAATCCTAATGCGTGAGAGCGATATCCCTCTCACGGCAGTGAGCACGCCAAGCGGCATGCTCTGGGAATGGCTAGTAATGCCACAGGGGCTTAAGAACGCCCCTGCGACTTTCAACAGGTGCGTGACGCACTTGTTGCGCTCGGTGCGCGACTTCGCACCGAGCTACTTCGATGATGTATTCATCCACAGCCGGGCTGTGGACGGGAAGACCGACGTAGAGATGCACAGGGTGCATCTCCGGAAGCTACTTGAGCTTATGCGAAAGCATAAGCTCTACGCGAACCTGAAGAAGTGTATCTTCGGGGCGAGCGAGATACCCGTCCTCGGGTGTCTCGTAGGGAAGAATGGTGTTCGCCCTGACCCGGAAAAGGTCAGAGTGATCAATGAATGGCCAACGCCTTCAAGTGTCAAGGAACTGAGGCAGTTCCTTGGCTTGGCCACGTACTTGTGCAAGTACGTGGAGGATTATGCGGGCAAGATCCGCCCGCTGTCACAGCTTCTTAAGAAAGAAGCTGTGTGGAATTGGACACCCGATTGCCAAAAGGCATTCGATGCAGTCAAGCGGGGCTTGACTGAGGCGCCGATCTTGGCAGTGGCTGACCAAGATCGCCCATTTCACGTAGTGTGTGACGCATCCGATTTCGCGATCGGATGCGCGTTGATGCAGCACGATCACGAGGGCCGTGATCGTGTCGTCTACTACCAATCGCGTCAGCTGAAGCCAGCTGAGCGCAACTATCCGGTGCATGACAAGGAACTCCTTGCCATGAAGTATGCACTCGCAAAGTTCCGAGTGTACTTGCTTGGGAGTAGACCATTTGTGGTCTACACCGACCATGCTTCACTGCGCACCGCAGTGAAGTCGCCACACATTTCACAAAGAATGGCGAGATGGCTCTCATTCTTTGCGGAGTATAACTTCCGGGTCGAATACAAACCCGGAAGATTGAACGTGGTGGCCGACGCGTTATCACGTCGGCCGGACTATGCAGAAGCTGTTGACGTCAATGCCATTGACGCCATGCGATCGAGCAAACCCACATCATCTCTGTTGGATGATGTGAAGGCCGCGTACGCGCACGACGCGGACGCGAAGCTCTTGCTGGCCTATGGCACAGCGCCTTCTGACAAGTCCCGTCAGAAGCTGCCCAAGCACCTTCGAGCGCGTGCACACCGCTTTCGTGTGCACGACGGACTACTGCTTTACAATGCAGTCGACGACAACGCGGATCGCGTTGTCGTGCCAAATGACCATGACCTGCGACTCAGGATCATGTACGAGTATCATGATGCCCCGACTGCGGGACATCTCGGACGTGAGAAGACTTACGTCCTTCTCACGCGCGACTTCTACTGGCACCACCAGTATAAGTGGGTGCGCAAGTACATCCGTGCTTGCGAGGTATGCCAACGCGTAAAGCCTGCGCCATTCGCGCAGGCTCCACTGCAATCACTACCGACTCCGTCGGAGTGTTGGAAGTCCATGTCTTTGGACTTCATCTTTGGTCTTCCCCCGGACAGCGGAGGGAATACCGGTGTTGTGGTCTTCGTCGACCGCTTCAGCAAGATGGTACATCTTGCTGCGGTGCCGGCAGAAGTGACCGCGAAGCAGACGGCCCGTCTGTTCGTCGACATGGTGTTCAAACACCATGGCATGCCGACCGACATCGTGTCGGACAGAGACCCGCGCTTCACAGCGCACCTGTGGCAAGAAGTGTTTACACTTCTTGGGAGCCAGCTTTCCATGTCGACTGCGGATCATCCGCAGACGGACGGTCAAACCGAGCGCGTGAATCGCGTGCTCGTCGATATGTTGAAGAGCTACGCTCACTCGTTCCAATACTGGAGCGAGTGCTTATCGATGGCAGAGTTTGCCATCAATAACTCAGTGCATGCCTCGACCGGGCATACACCGTTCTACGTGAATGCCATGCGGCATCCACGTCTACCGAGTTTACTCGGAGTGATGGCTCCCACTTTAAGTGGGGGAGGATCTACGACTGCAATACAGCAGCCGCAGAAAACCGCTGACACTTGCACAGTGTCAGCTGCAACAATGGACAAACCACATGAGTCTGCGCAGGGCGCAGACTCCCCCAACAACAAGGCCAACGACCACGGGTCTGCGCAGGGCGCAGACACCGCAAAGAACCACGCAGAGGC OLD KEY: AGACTCCCCCAACAACAAGGCCAACGACCACGGGT NEW KEY: CAGGGCGCAGACACCGCAAAGAACCACGCAGAGGC ........ _A_ 0X000000X0X0X0000XXX0XX00X000X0X000000000000X0000X0X100X00009X00X0000X00000 __84__ ........ _T_ 00000000000000000000000000000000000000000X0X0000000000000090009000XX0000900 __84__ ........ _G_ 00XXX0X00X00000X0000X000000X00X0XX00XXX000000X0XX0X090X0X00X000X000000X000X __84__ ........ _C_ X0000X0X000X0XX0X000000XX0X0X00000X9000XX0X000X000000X000X1000000X00X00X1X0 __84__ ........ _N_ 000000000000000000000000000000000000000000000000000000000000000000000000000 __84__ ........ ALL wwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwvvvuttssrrqqqppoonlkjf __84__ ******** *** ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^**************************************** __84__ ######## CNS CAGGGCGCAGACACCGCAAAGAACCACGCAGAGGCcGGGCCTCTAGCGGAGAgCGAGCtGaAtGACTTCAGCtCG __84__ ######## QLT XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX+XXXXXXXXXXXXXXXX+XXXXX+X+X+XXXXXXXXX+XX __84__ >CONSENSUS__84__ Length: 3364 [gain: 40] ATGGCGTCGAGGTGACGAAGGCGTGTCAACTCCGGGAGTTGACGCTGCAAACAGTGCGGACGGTTGCAAACGTACCGCACTGACGCAATTTGCATGCTGTCGTGCAGCCGGGCTGCACGACGAAGCGCCATGCGATCAAGCCGGGCTTGATATCGCGCGCCCGCAGACAGGGTCTGCCGGCGAAGGGACACATTACCGTGCAGCCGGGCTGCACGAAGGAAAATGCGGTCAAGCCGGGCTTGATACCGCGCGCCCGCGGACAGGGTCCGCCGGCGAACGACTGTCCACGGCCGGGCCTGGACCAGAAGAACAACTGTGCGGAGCCGGGCTCCGCACAACAAGAAGACGGCGCAAGCGGAAAACGCTGCGCAAGTCTCGGTCCGGGACCGAGACGCAACAAGAGCAGTCTGCTGGGCAGACTGCGGCGGTGACGCCGAATGTCAAGACGCTAAGCGTCTTGACGCGCACCGATACTGGATTCCAGTATCGTGACATGGAACTCGCTAGTCCTCCGACGACGGCGTCGGAGTTGACTTCGCTTCCAGCCATGAGCTGGAAGCGCTTCACGCGCGACTTGCACGATGGACGCATCGAGCAAGTCTGCGTTCTTTCGGACAGCGAAAGAACGGAGAGCGAGAGCGAAGAGCTGAGGCAGCTCTTCATGGGAAGTACCACTGAGAGTGAAGACACTCTCAGTGCGAAGACGAAGCGAGAGCGCTTCGAGGAACAAGGTTGGGACTCGCTGAAGTCGAGTCCCTATTACGAATTGTTGAGGGAGTACAAAGACGTACTCCCGGAAGAGATTCCTGCGGAGCTTCCGCAGGATAAGGGCATTCAGCACGAGATTGATCTCGTGCCGGGCACGAAGTACTGTGTCACGCGGCAGTGGCCACTGCCGCGAGAGCAAGTGAAAGCGATCGACGACTTCTTTGAAAGTCGTCGTAAAGCAGGACAAGTGCGGGAATCAAAGTCCCCGCACAGTGCTCCGACGTTCTGTGTCAAGAAGCCACAGGGCGGATGGCGCATCGTTCATGCCTACAACAAGCTGAACGATGCGACGGTACCGGCGCAGACGCCGATACCGCGAAAAGATGTTATCATCGATTCGATGGCCGGGAGCACCGTTTACAGTGCTCTCGACTTGCGAGATGGATTTTATCAAATCCTAATGCGTGAGAGCGATATCCCTCTCACGGCAGTGAGCACGCCAAGCGGCATGCTCTGGGAATGGCTAGTAATGCCACAGGGGCTTAAGAACGCCCCTGCGACTTTCAACAGGTGCGTGACGCACTTGTTGCGCTCGGTGCGCGACTTCGCACCGAGCTACTTCGATGATGTATTCATCCACAGCCGGGCTGTGGACGGGAAGACCGACGTAGAGATGCACAGGGTGCATCTCCGGAAGCTACTTGAGCTTATGCGAAAGCATAAGCTCTACGCGAACCTGAAGAAGTGTATCTTCGGGGCGAGCGAGATACCCGTCCTCGGGTGTCTCGTAGGGAAGAATGGTGTTCGCCCTGACCCGGAAAAGGTCAGAGTGATCAATGAATGGCCAACGCCTTCAAGTGTCAAGGAACTGAGGCAGTTCCTTGGCTTGGCCACGTACTTGTGCAAGTACGTGGAGGATTATGCGGGCAAGATCCGCCCGCTGTCACAGCTTCTTAAGAAAGAAGCTGTGTGGAATTGGACACCCGATTGCCAAAAGGCATTCGATGCAGTCAAGCGGGGCTTGACTGAGGCGCCGATCTTGGCAGTGGCTGACCAAGATCGCCCATTTCACGTAGTGTGTGACGCATCCGATTTCGCGATCGGATGCGCGTTGATGCAGCACGATCACGAGGGCCGTGATCGTGTCGTCTACTACCAATCGCGTCAGCTGAAGCCAGCTGAGCGCAACTATCCGGTGCATGACAAGGAACTCCTTGCCATGAAGTATGCACTCGCAAAGTTCCGAGTGTACTTGCTTGGGAGTAGACCATTTGTGGTCTACACCGACCATGCTTCACTGCGCACCGCAGTGAAGTCGCCACACATTTCACAAAGAATGGCGAGATGGCTCTCATTCTTTGCGGAGTATAACTTCCGGGTCGAATACAAACCCGGAAGATTGAACGTGGTGGCCGACGCGTTATCACGTCGGCCGGACTATGCAGAAGCTGTTGACGTCAATGCCATTGACGCCATGCGATCGAGCAAACCCACATCATCTCTGTTGGATGATGTGAAGGCCGCGTACGCGCACGACGCGGACGCGAAGCTCTTGCTGGCCTATGGCACAGCGCCTTCTGACAAGTCCCGTCAGAAGCTGCCCAAGCACCTTCGAGCGCGTGCACACCGCTTTCGTGTGCACGACGGACTACTGCTTTACAATGCAGTCGACGACAACGCGGATCGCGTTGTCGTGCCAAATGACCATGACCTGCGACTCAGGATCATGTACGAGTATCATGATGCCCCGACTGCGGGACATCTCGGACGTGAGAAGACTTACGTCCTTCTCACGCGCGACTTCTACTGGCACCACCAGTATAAGTGGGTGCGCAAGTACATCCGTGCTTGCGAGGTATGCCAACGCGTAAAGCCTGCGCCATTCGCGCAGGCTCCACTGCAATCACTACCGACTCCGTCGGAGTGTTGGAAGTCCATGTCTTTGGACTTCATCTTTGGTCTTCCCCCGGACAGCGGAGGGAATACCGGTGTTGTGGTCTTCGTCGACCGCTTCAGCAAGATGGTACATCTTGCTGCGGTGCCGGCAGAAGTGACCGCGAAGCAGACGGCCCGTCTGTTCGTCGACATGGTGTTCAAACACCATGGCATGCCGACCGACATCGTGTCGGACAGAGACCCGCGCTTCACAGCGCACCTGTGGCAAGAAGTGTTTACACTTCTTGGGAGCCAGCTTTCCATGTCGACTGCGGATCATCCGCAGACGGACGGTCAAACCGAGCGCGTGAATCGCGTGCTCGTCGATATGTTGAAGAGCTACGCTCACTCGTTCCAATACTGGAGCGAGTGCTTATCGATGGCAGAGTTTGCCATCAATAACTCAGTGCATGCCTCGACCGGGCATACACCGTTCTACGTGAATGCCATGCGGCATCCACGTCTACCGAGTTTACTCGGAGTGATGGCTCCCACTTTAAGTGGGGGAGGATCTACGACTGCAATACAGCAGCCGCAGAAAACCGCTGACACTTGCACAGTGTCAGCTGCAACAATGGACAAACCACATGAGTCTGCGCAGGGCGCAGACTCCCCCAACAACAAGGCCAACGACCACGGGTCTGCGCAGGGCGCAGACACCGCAAAGAACCACGCAGAGGCCGGGCCTCTAGCGGAGAGCGAGCTGAATGACTTCAGCTCG OLD KEY: CAGGGCGCAGACACCGCAAAGAACCACGCAGAGGC NEW KEY: CTCTAGCGGAGAGCGAGCTGAATGACTTCAGCTCG ........ _A_ 0000X0000X0X000X0000XX00X0000X000000X000XX00X20000900X00XXXX0X0XX000004X000 __85__ ........ _T_ 0X0X00000000000000X000X000XX0000X0000X0000X0008XX00X10000000000000000900XX0 __85__ ........ _G_ 00000X0XX0X0X0X0X00X000X000000X000XX00X000000800000000000000X0000X00X060000 __85__ ........ _C_ X0X000X000000X000X0000000X00X00X0X00000X000X00200X1090X9000000X000XX000000X __85__ ........ _N_ 000000000000000000000000000000000000000000000000000000000000000000000000000 __85__ ........ ALL OOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOwwwwwwwwwwwwwwwwvvuutsrrqqqpool __85__ ******** *** ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^**************************************** __85__ ######## CNS CTCTAGCGGAGAGCGAGCTGAATGACTTCAGCTCGGATGCAATCAgtTTCaTcACcAAAAGACAAGCCGtgATTC __85__ ######## QLT XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX++XXX+X+XX+XXXXXXXXXXXXX+!XXXX __85__ >CONSENSUS__85__ Length: 3404 [gain: 40] ATGGCGTCGAGGTGACGAAGGCGTGTCAACTCCGGGAGTTGACGCTGCAAACAGTGCGGACGGTTGCAAACGTACCGCACTGACGCAATTTGCATGCTGTCGTGCAGCCGGGCTGCACGACGAAGCGCCATGCGATCAAGCCGGGCTTGATATCGCGCGCCCGCAGACAGGGTCTGCCGGCGAAGGGACACATTACCGTGCAGCCGGGCTGCACGAAGGAAAATGCGGTCAAGCCGGGCTTGATACCGCGCGCCCGCGGACAGGGTCCGCCGGCGAACGACTGTCCACGGCCGGGCCTGGACCAGAAGAACAACTGTGCGGAGCCGGGCTCCGCACAACAAGAAGACGGCGCAAGCGGAAAACGCTGCGCAAGTCTCGGTCCGGGACCGAGACGCAACAAGAGCAGTCTGCTGGGCAGACTGCGGCGGTGACGCCGAATGTCAAGACGCTAAGCGTCTTGACGCGCACCGATACTGGATTCCAGTATCGTGACATGGAACTCGCTAGTCCTCCGACGACGGCGTCGGAGTTGACTTCGCTTCCAGCCATGAGCTGGAAGCGCTTCACGCGCGACTTGCACGATGGACGCATCGAGCAAGTCTGCGTTCTTTCGGACAGCGAAAGAACGGAGAGCGAGAGCGAAGAGCTGAGGCAGCTCTTCATGGGAAGTACCACTGAGAGTGAAGACACTCTCAGTGCGAAGACGAAGCGAGAGCGCTTCGAGGAACAAGGTTGGGACTCGCTGAAGTCGAGTCCCTATTACGAATTGTTGAGGGAGTACAAAGACGTACTCCCGGAAGAGATTCCTGCGGAGCTTCCGCAGGATAAGGGCATTCAGCACGAGATTGATCTCGTGCCGGGCACGAAGTACTGTGTCACGCGGCAGTGGCCACTGCCGCGAGAGCAAGTGAAAGCGATCGACGACTTCTTTGAAAGTCGTCGTAAAGCAGGACAAGTGCGGGAATCAAAGTCCCCGCACAGTGCTCCGACGTTCTGTGTCAAGAAGCCACAGGGCGGATGGCGCATCGTTCATGCCTACAACAAGCTGAACGATGCGACGGTACCGGCGCAGACGCCGATACCGCGAAAAGATGTTATCATCGATTCGATGGCCGGGAGCACCGTTTACAGTGCTCTCGACTTGCGAGATGGATTTTATCAAATCCTAATGCGTGAGAGCGATATCCCTCTCACGGCAGTGAGCACGCCAAGCGGCATGCTCTGGGAATGGCTAGTAATGCCACAGGGGCTTAAGAACGCCCCTGCGACTTTCAACAGGTGCGTGACGCACTTGTTGCGCTCGGTGCGCGACTTCGCACCGAGCTACTTCGATGATGTATTCATCCACAGCCGGGCTGTGGACGGGAAGACCGACGTAGAGATGCACAGGGTGCATCTCCGGAAGCTACTTGAGCTTATGCGAAAGCATAAGCTCTACGCGAACCTGAAGAAGTGTATCTTCGGGGCGAGCGAGATACCCGTCCTCGGGTGTCTCGTAGGGAAGAATGGTGTTCGCCCTGACCCGGAAAAGGTCAGAGTGATCAATGAATGGCCAACGCCTTCAAGTGTCAAGGAACTGAGGCAGTTCCTTGGCTTGGCCACGTACTTGTGCAAGTACGTGGAGGATTATGCGGGCAAGATCCGCCCGCTGTCACAGCTTCTTAAGAAAGAAGCTGTGTGGAATTGGACACCCGATTGCCAAAAGGCATTCGATGCAGTCAAGCGGGGCTTGACTGAGGCGCCGATCTTGGCAGTGGCTGACCAAGATCGCCCATTTCACGTAGTGTGTGACGCATCCGATTTCGCGATCGGATGCGCGTTGATGCAGCACGATCACGAGGGCCGTGATCGTGTCGTCTACTACCAATCGCGTCAGCTGAAGCCAGCTGAGCGCAACTATCCGGTGCATGACAAGGAACTCCTTGCCATGAAGTATGCACTCGCAAAGTTCCGAGTGTACTTGCTTGGGAGTAGACCATTTGTGGTCTACACCGACCATGCTTCACTGCGCACCGCAGTGAAGTCGCCACACATTTCACAAAGAATGGCGAGATGGCTCTCATTCTTTGCGGAGTATAACTTCCGGGTCGAATACAAACCCGGAAGATTGAACGTGGTGGCCGACGCGTTATCACGTCGGCCGGACTATGCAGAAGCTGTTGACGTCAATGCCATTGACGCCATGCGATCGAGCAAACCCACATCATCTCTGTTGGATGATGTGAAGGCCGCGTACGCGCACGACGCGGACGCGAAGCTCTTGCTGGCCTATGGCACAGCGCCTTCTGACAAGTCCCGTCAGAAGCTGCCCAAGCACCTTCGAGCGCGTGCACACCGCTTTCGTGTGCACGACGGACTACTGCTTTACAATGCAGTCGACGACAACGCGGATCGCGTTGTCGTGCCAAATGACCATGACCTGCGACTCAGGATCATGTACGAGTATCATGATGCCCCGACTGCGGGACATCTCGGACGTGAGAAGACTTACGTCCTTCTCACGCGCGACTTCTACTGGCACCACCAGTATAAGTGGGTGCGCAAGTACATCCGTGCTTGCGAGGTATGCCAACGCGTAAAGCCTGCGCCATTCGCGCAGGCTCCACTGCAATCACTACCGACTCCGTCGGAGTGTTGGAAGTCCATGTCTTTGGACTTCATCTTTGGTCTTCCCCCGGACAGCGGAGGGAATACCGGTGTTGTGGTCTTCGTCGACCGCTTCAGCAAGATGGTACATCTTGCTGCGGTGCCGGCAGAAGTGACCGCGAAGCAGACGGCCCGTCTGTTCGTCGACATGGTGTTCAAACACCATGGCATGCCGACCGACATCGTGTCGGACAGAGACCCGCGCTTCACAGCGCACCTGTGGCAAGAAGTGTTTACACTTCTTGGGAGCCAGCTTTCCATGTCGACTGCGGATCATCCGCAGACGGACGGTCAAACCGAGCGCGTGAATCGCGTGCTCGTCGATATGTTGAAGAGCTACGCTCACTCGTTCCAATACTGGAGCGAGTGCTTATCGATGGCAGAGTTTGCCATCAATAACTCAGTGCATGCCTCGACCGGGCATACACCGTTCTACGTGAATGCCATGCGGCATCCACGTCTACCGAGTTTACTCGGAGTGATGGCTCCCACTTTAAGTGGGGGAGGATCTACGACTGCAATACAGCAGCCGCAGAAAACCGCTGACACTTGCACAGTGTCAGCTGCAACAATGGACAAACCACATGAGTCTGCGCAGGGCGCAGACTCCCCCAACAACAAGGCCAACGACCACGGGTCTGCGCAGGGCGCAGACACCGCAAAGAACCACGCAGAGGCCGGGCCTCTAGCGGAGAGCGAGCTGAATGACTTCAGCTCGGATGCAATCAGTTTCATCACCAAAAGACAAGCCGTGATTC OLD KEY: CTCTAGCGGAGAGCGAGCTGAATGACTTCAGCTCG NEW KEY: AATCAGTTTCATCACCAAAAGACAAGCCGTGATTC ........ _A_ XX00X00000X00X00XXXX0X0XX000000X000000000000XX0X0906X0X00X0000000000900XX09 __86__ ........ _T_ 00X000XXX00X00000000000000000X00XX000XXX0X00000000030X0000009X0X0XX00900000 __86__ ........ _G_ 00000X00000000000000X0000X00X0X0000XX000X00000X00000000X00X00000X00X1000000 __86__ ........ _C_ 000X00000X00X0XX000000X000XX000000X0000000XX0000X0X00000X00X10X0000000X00X0 __86__ ........ _N_ 000000000000000000000000000000000000000000000000000000000000000000000000000 __86__ ........ ALL wwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwvvvuuttsssrrrqqqppppooolkj __86__ ******** *** ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^**************************************** __86__ ######## CNS AATCAGTTTCATCACCAAAAGACAAGCCGTGATTCGGTTTGTCCAAGACaCaATAGCAGCtTCTGTTGatCAACa __86__ ######## QLT XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX+X!XXXXXXXX+XXXXXXX++XXXX+ __86__ >CONSENSUS__86__ Length: 3444 [gain: 40] ATGGCGTCGAGGTGACGAAGGCGTGTCAACTCCGGGAGTTGACGCTGCAAACAGTGCGGACGGTTGCAAACGTACCGCACTGACGCAATTTGCATGCTGTCGTGCAGCCGGGCTGCACGACGAAGCGCCATGCGATCAAGCCGGGCTTGATATCGCGCGCCCGCAGACAGGGTCTGCCGGCGAAGGGACACATTACCGTGCAGCCGGGCTGCACGAAGGAAAATGCGGTCAAGCCGGGCTTGATACCGCGCGCCCGCGGACAGGGTCCGCCGGCGAACGACTGTCCACGGCCGGGCCTGGACCAGAAGAACAACTGTGCGGAGCCGGGCTCCGCACAACAAGAAGACGGCGCAAGCGGAAAACGCTGCGCAAGTCTCGGTCCGGGACCGAGACGCAACAAGAGCAGTCTGCTGGGCAGACTGCGGCGGTGACGCCGAATGTCAAGACGCTAAGCGTCTTGACGCGCACCGATACTGGATTCCAGTATCGTGACATGGAACTCGCTAGTCCTCCGACGACGGCGTCGGAGTTGACTTCGCTTCCAGCCATGAGCTGGAAGCGCTTCACGCGCGACTTGCACGATGGACGCATCGAGCAAGTCTGCGTTCTTTCGGACAGCGAAAGAACGGAGAGCGAGAGCGAAGAGCTGAGGCAGCTCTTCATGGGAAGTACCACTGAGAGTGAAGACACTCTCAGTGCGAAGACGAAGCGAGAGCGCTTCGAGGAACAAGGTTGGGACTCGCTGAAGTCGAGTCCCTATTACGAATTGTTGAGGGAGTACAAAGACGTACTCCCGGAAGAGATTCCTGCGGAGCTTCCGCAGGATAAGGGCATTCAGCACGAGATTGATCTCGTGCCGGGCACGAAGTACTGTGTCACGCGGCAGTGGCCACTGCCGCGAGAGCAAGTGAAAGCGATCGACGACTTCTTTGAAAGTCGTCGTAAAGCAGGACAAGTGCGGGAATCAAAGTCCCCGCACAGTGCTCCGACGTTCTGTGTCAAGAAGCCACAGGGCGGATGGCGCATCGTTCATGCCTACAACAAGCTGAACGATGCGACGGTACCGGCGCAGACGCCGATACCGCGAAAAGATGTTATCATCGATTCGATGGCCGGGAGCACCGTTTACAGTGCTCTCGACTTGCGAGATGGATTTTATCAAATCCTAATGCGTGAGAGCGATATCCCTCTCACGGCAGTGAGCACGCCAAGCGGCATGCTCTGGGAATGGCTAGTAATGCCACAGGGGCTTAAGAACGCCCCTGCGACTTTCAACAGGTGCGTGACGCACTTGTTGCGCTCGGTGCGCGACTTCGCACCGAGCTACTTCGATGATGTATTCATCCACAGCCGGGCTGTGGACGGGAAGACCGACGTAGAGATGCACAGGGTGCATCTCCGGAAGCTACTTGAGCTTATGCGAAAGCATAAGCTCTACGCGAACCTGAAGAAGTGTATCTTCGGGGCGAGCGAGATACCCGTCCTCGGGTGTCTCGTAGGGAAGAATGGTGTTCGCCCTGACCCGGAAAAGGTCAGAGTGATCAATGAATGGCCAACGCCTTCAAGTGTCAAGGAACTGAGGCAGTTCCTTGGCTTGGCCACGTACTTGTGCAAGTACGTGGAGGATTATGCGGGCAAGATCCGCCCGCTGTCACAGCTTCTTAAGAAAGAAGCTGTGTGGAATTGGACACCCGATTGCCAAAAGGCATTCGATGCAGTCAAGCGGGGCTTGACTGAGGCGCCGATCTTGGCAGTGGCTGACCAAGATCGCCCATTTCACGTAGTGTGTGACGCATCCGATTTCGCGATCGGATGCGCGTTGATGCAGCACGATCACGAGGGCCGTGATCGTGTCGTCTACTACCAATCGCGTCAGCTGAAGCCAGCTGAGCGCAACTATCCGGTGCATGACAAGGAACTCCTTGCCATGAAGTATGCACTCGCAAAGTTCCGAGTGTACTTGCTTGGGAGTAGACCATTTGTGGTCTACACCGACCATGCTTCACTGCGCACCGCAGTGAAGTCGCCACACATTTCACAAAGAATGGCGAGATGGCTCTCATTCTTTGCGGAGTATAACTTCCGGGTCGAATACAAACCCGGAAGATTGAACGTGGTGGCCGACGCGTTATCACGTCGGCCGGACTATGCAGAAGCTGTTGACGTCAATGCCATTGACGCCATGCGATCGAGCAAACCCACATCATCTCTGTTGGATGATGTGAAGGCCGCGTACGCGCACGACGCGGACGCGAAGCTCTTGCTGGCCTATGGCACAGCGCCTTCTGACAAGTCCCGTCAGAAGCTGCCCAAGCACCTTCGAGCGCGTGCACACCGCTTTCGTGTGCACGACGGACTACTGCTTTACAATGCAGTCGACGACAACGCGGATCGCGTTGTCGTGCCAAATGACCATGACCTGCGACTCAGGATCATGTACGAGTATCATGATGCCCCGACTGCGGGACATCTCGGACGTGAGAAGACTTACGTCCTTCTCACGCGCGACTTCTACTGGCACCACCAGTATAAGTGGGTGCGCAAGTACATCCGTGCTTGCGAGGTATGCCAACGCGTAAAGCCTGCGCCATTCGCGCAGGCTCCACTGCAATCACTACCGACTCCGTCGGAGTGTTGGAAGTCCATGTCTTTGGACTTCATCTTTGGTCTTCCCCCGGACAGCGGAGGGAATACCGGTGTTGTGGTCTTCGTCGACCGCTTCAGCAAGATGGTACATCTTGCTGCGGTGCCGGCAGAAGTGACCGCGAAGCAGACGGCCCGTCTGTTCGTCGACATGGTGTTCAAACACCATGGCATGCCGACCGACATCGTGTCGGACAGAGACCCGCGCTTCACAGCGCACCTGTGGCAAGAAGTGTTTACACTTCTTGGGAGCCAGCTTTCCATGTCGACTGCGGATCATCCGCAGACGGACGGTCAAACCGAGCGCGTGAATCGCGTGCTCGTCGATATGTTGAAGAGCTACGCTCACTCGTTCCAATACTGGAGCGAGTGCTTATCGATGGCAGAGTTTGCCATCAATAACTCAGTGCATGCCTCGACCGGGCATACACCGTTCTACGTGAATGCCATGCGGCATCCACGTCTACCGAGTTTACTCGGAGTGATGGCTCCCACTTTAAGTGGGGGAGGATCTACGACTGCAATACAGCAGCCGCAGAAAACCGCTGACACTTGCACAGTGTCAGCTGCAACAATGGACAAACCACATGAGTCTGCGCAGGGCGCAGACTCCCCCAACAACAAGGCCAACGACCACGGGTCTGCGCAGGGCGCAGACACCGCAAAGAACCACGCAGAGGCCGGGCCTCTAGCGGAGAGCGAGCTGAATGACTTCAGCTCGGATGCAATCAGTTTCATCACCAAAAGACAAGCCGTGATTCGGTTTGTCCAAGACACAATAGCAGCTTCTGTTGATCAACA OLD KEY: AATCAGTTTCATCACCAAAAGACAAGCCGTGATTC NEW KEY: GTCCAAGACACAATAGCAGCTTCTGTTGATCAACA ........ _A_ 0000XX0X0X0XX0X00X0000000000X00XX0X0XX0000XX000X0X0XX0000000X0X000XX0X0XXX0 __87__ ........ _T_ 0X00000000000X000000XX0X0XX00X0000000000X000000000000X010000000000000000009 __87__ ........ _G_ X00000X00000000X00X00000X00X0000000X00X00X000X00X00000X0XXX00X0XX0000000000 __87__ ........ _C_ 00XX0000X0X00000X00X00X0000000X00X00000X0000X0X000X00008000X00000X00X0X0000 __87__ ........ _N_ 000000000000000000000000000000000000000000000000000000000000000000000000000 __87__ ........ ALL wwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwvvvvuuuttsssrrrqqqqpppoooomkji __87__ ******** *** ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^**************************************** __87__ ######## CNS GTCCAAGACACAATAGCAGCTTCTGTTGATCAACAGAAGCTGAACGCAGACAATGcGGGCAGAGGCAACACAAAt __87__ ######## QLT XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX+XXXXXXXXXXXXXXXXXX+ __87__ >CONSENSUS__87__ Length: 3484 [gain: 40] ATGGCGTCGAGGTGACGAAGGCGTGTCAACTCCGGGAGTTGACGCTGCAAACAGTGCGGACGGTTGCAAACGTACCGCACTGACGCAATTTGCATGCTGTCGTGCAGCCGGGCTGCACGACGAAGCGCCATGCGATCAAGCCGGGCTTGATATCGCGCGCCCGCAGACAGGGTCTGCCGGCGAAGGGACACATTACCGTGCAGCCGGGCTGCACGAAGGAAAATGCGGTCAAGCCGGGCTTGATACCGCGCGCCCGCGGACAGGGTCCGCCGGCGAACGACTGTCCACGGCCGGGCCTGGACCAGAAGAACAACTGTGCGGAGCCGGGCTCCGCACAACAAGAAGACGGCGCAAGCGGAAAACGCTGCGCAAGTCTCGGTCCGGGACCGAGACGCAACAAGAGCAGTCTGCTGGGCAGACTGCGGCGGTGACGCCGAATGTCAAGACGCTAAGCGTCTTGACGCGCACCGATACTGGATTCCAGTATCGTGACATGGAACTCGCTAGTCCTCCGACGACGGCGTCGGAGTTGACTTCGCTTCCAGCCATGAGCTGGAAGCGCTTCACGCGCGACTTGCACGATGGACGCATCGAGCAAGTCTGCGTTCTTTCGGACAGCGAAAGAACGGAGAGCGAGAGCGAAGAGCTGAGGCAGCTCTTCATGGGAAGTACCACTGAGAGTGAAGACACTCTCAGTGCGAAGACGAAGCGAGAGCGCTTCGAGGAACAAGGTTGGGACTCGCTGAAGTCGAGTCCCTATTACGAATTGTTGAGGGAGTACAAAGACGTACTCCCGGAAGAGATTCCTGCGGAGCTTCCGCAGGATAAGGGCATTCAGCACGAGATTGATCTCGTGCCGGGCACGAAGTACTGTGTCACGCGGCAGTGGCCACTGCCGCGAGAGCAAGTGAAAGCGATCGACGACTTCTTTGAAAGTCGTCGTAAAGCAGGACAAGTGCGGGAATCAAAGTCCCCGCACAGTGCTCCGACGTTCTGTGTCAAGAAGCCACAGGGCGGATGGCGCATCGTTCATGCCTACAACAAGCTGAACGATGCGACGGTACCGGCGCAGACGCCGATACCGCGAAAAGATGTTATCATCGATTCGATGGCCGGGAGCACCGTTTACAGTGCTCTCGACTTGCGAGATGGATTTTATCAAATCCTAATGCGTGAGAGCGATATCCCTCTCACGGCAGTGAGCACGCCAAGCGGCATGCTCTGGGAATGGCTAGTAATGCCACAGGGGCTTAAGAACGCCCCTGCGACTTTCAACAGGTGCGTGACGCACTTGTTGCGCTCGGTGCGCGACTTCGCACCGAGCTACTTCGATGATGTATTCATCCACAGCCGGGCTGTGGACGGGAAGACCGACGTAGAGATGCACAGGGTGCATCTCCGGAAGCTACTTGAGCTTATGCGAAAGCATAAGCTCTACGCGAACCTGAAGAAGTGTATCTTCGGGGCGAGCGAGATACCCGTCCTCGGGTGTCTCGTAGGGAAGAATGGTGTTCGCCCTGACCCGGAAAAGGTCAGAGTGATCAATGAATGGCCAACGCCTTCAAGTGTCAAGGAACTGAGGCAGTTCCTTGGCTTGGCCACGTACTTGTGCAAGTACGTGGAGGATTATGCGGGCAAGATCCGCCCGCTGTCACAGCTTCTTAAGAAAGAAGCTGTGTGGAATTGGACACCCGATTGCCAAAAGGCATTCGATGCAGTCAAGCGGGGCTTGACTGAGGCGCCGATCTTGGCAGTGGCTGACCAAGATCGCCCATTTCACGTAGTGTGTGACGCATCCGATTTCGCGATCGGATGCGCGTTGATGCAGCACGATCACGAGGGCCGTGATCGTGTCGTCTACTACCAATCGCGTCAGCTGAAGCCAGCTGAGCGCAACTATCCGGTGCATGACAAGGAACTCCTTGCCATGAAGTATGCACTCGCAAAGTTCCGAGTGTACTTGCTTGGGAGTAGACCATTTGTGGTCTACACCGACCATGCTTCACTGCGCACCGCAGTGAAGTCGCCACACATTTCACAAAGAATGGCGAGATGGCTCTCATTCTTTGCGGAGTATAACTTCCGGGTCGAATACAAACCCGGAAGATTGAACGTGGTGGCCGACGCGTTATCACGTCGGCCGGACTATGCAGAAGCTGTTGACGTCAATGCCATTGACGCCATGCGATCGAGCAAACCCACATCATCTCTGTTGGATGATGTGAAGGCCGCGTACGCGCACGACGCGGACGCGAAGCTCTTGCTGGCCTATGGCACAGCGCCTTCTGACAAGTCCCGTCAGAAGCTGCCCAAGCACCTTCGAGCGCGTGCACACCGCTTTCGTGTGCACGACGGACTACTGCTTTACAATGCAGTCGACGACAACGCGGATCGCGTTGTCGTGCCAAATGACCATGACCTGCGACTCAGGATCATGTACGAGTATCATGATGCCCCGACTGCGGGACATCTCGGACGTGAGAAGACTTACGTCCTTCTCACGCGCGACTTCTACTGGCACCACCAGTATAAGTGGGTGCGCAAGTACATCCGTGCTTGCGAGGTATGCCAACGCGTAAAGCCTGCGCCATTCGCGCAGGCTCCACTGCAATCACTACCGACTCCGTCGGAGTGTTGGAAGTCCATGTCTTTGGACTTCATCTTTGGTCTTCCCCCGGACAGCGGAGGGAATACCGGTGTTGTGGTCTTCGTCGACCGCTTCAGCAAGATGGTACATCTTGCTGCGGTGCCGGCAGAAGTGACCGCGAAGCAGACGGCCCGTCTGTTCGTCGACATGGTGTTCAAACACCATGGCATGCCGACCGACATCGTGTCGGACAGAGACCCGCGCTTCACAGCGCACCTGTGGCAAGAAGTGTTTACACTTCTTGGGAGCCAGCTTTCCATGTCGACTGCGGATCATCCGCAGACGGACGGTCAAACCGAGCGCGTGAATCGCGTGCTCGTCGATATGTTGAAGAGCTACGCTCACTCGTTCCAATACTGGAGCGAGTGCTTATCGATGGCAGAGTTTGCCATCAATAACTCAGTGCATGCCTCGACCGGGCATACACCGTTCTACGTGAATGCCATGCGGCATCCACGTCTACCGAGTTTACTCGGAGTGATGGCTCCCACTTTAAGTGGGGGAGGATCTACGACTGCAATACAGCAGCCGCAGAAAACCGCTGACACTTGCACAGTGTCAGCTGCAACAATGGACAAACCACATGAGTCTGCGCAGGGCGCAGACTCCCCCAACAACAAGGCCAACGACCACGGGTCTGCGCAGGGCGCAGACACCGCAAAGAACCACGCAGAGGCCGGGCCTCTAGCGGAGAGCGAGCTGAATGACTTCAGCTCGGATGCAATCAGTTTCATCACCAAAAGACAAGCCGTGATTCGGTTTGTCCAAGACACAATAGCAGCTTCTGTTGATCAACAGAAGCTGAACGCAGACAATGCGGGCAGAGGCAACACAAAT OLD KEY: GTCCAAGACACAATAGCAGCTTCTGTTGATCAACA NEW KEY: TGAACGCAGACAATGCGGGCAGAGGCAACACAAAT ........ _A_ 00XX000X0X0XX0000000X0X000XX0X0XXX00XX000XXX00010000X00900000000X001X090XXX __88__ ........ _T_ X000000000000X00000000000000000000X000XX80000XX00XX00XX00XXXX0XX00090010000 __88__ ........ _G_ 0X000X00X00000X0XXX00X0XX0000000000X00000000X009X0000001X0000X000X000000000 __88__ ........ _C_ 0000X0X000X0000X000X00000X00X0X00000000020000000000X00000000000000X00X0X000 __88__ ........ _N_ 000000000000000000000000000000000000000000000000000000000000000000000000000 __88__ ........ ALL OOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOwwwwwwwwwwwwwwwwwwwvuuttssrqqpooolkj __88__ ******** *** ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^**************************************** __88__ ######## CNS TGAACGCAGACAATGCGGGCAGAGGCAACACAAATGAATTtAAAGTTgGTTCATTaGTTTTGTTAGCtACaCAAA __88__ ######## QLT XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX+XXXXXX+XXXXXXX+XXXXXXXXXXX+XX+XXXX __88__ >CONSENSUS__88__ Length: 3524 [gain: 40] ATGGCGTCGAGGTGACGAAGGCGTGTCAACTCCGGGAGTTGACGCTGCAAACAGTGCGGACGGTTGCAAACGTACCGCACTGACGCAATTTGCATGCTGTCGTGCAGCCGGGCTGCACGACGAAGCGCCATGCGATCAAGCCGGGCTTGATATCGCGCGCCCGCAGACAGGGTCTGCCGGCGAAGGGACACATTACCGTGCAGCCGGGCTGCACGAAGGAAAATGCGGTCAAGCCGGGCTTGATACCGCGCGCCCGCGGACAGGGTCCGCCGGCGAACGACTGTCCACGGCCGGGCCTGGACCAGAAGAACAACTGTGCGGAGCCGGGCTCCGCACAACAAGAAGACGGCGCAAGCGGAAAACGCTGCGCAAGTCTCGGTCCGGGACCGAGACGCAACAAGAGCAGTCTGCTGGGCAGACTGCGGCGGTGACGCCGAATGTCAAGACGCTAAGCGTCTTGACGCGCACCGATACTGGATTCCAGTATCGTGACATGGAACTCGCTAGTCCTCCGACGACGGCGTCGGAGTTGACTTCGCTTCCAGCCATGAGCTGGAAGCGCTTCACGCGCGACTTGCACGATGGACGCATCGAGCAAGTCTGCGTTCTTTCGGACAGCGAAAGAACGGAGAGCGAGAGCGAAGAGCTGAGGCAGCTCTTCATGGGAAGTACCACTGAGAGTGAAGACACTCTCAGTGCGAAGACGAAGCGAGAGCGCTTCGAGGAACAAGGTTGGGACTCGCTGAAGTCGAGTCCCTATTACGAATTGTTGAGGGAGTACAAAGACGTACTCCCGGAAGAGATTCCTGCGGAGCTTCCGCAGGATAAGGGCATTCAGCACGAGATTGATCTCGTGCCGGGCACGAAGTACTGTGTCACGCGGCAGTGGCCACTGCCGCGAGAGCAAGTGAAAGCGATCGACGACTTCTTTGAAAGTCGTCGTAAAGCAGGACAAGTGCGGGAATCAAAGTCCCCGCACAGTGCTCCGACGTTCTGTGTCAAGAAGCCACAGGGCGGATGGCGCATCGTTCATGCCTACAACAAGCTGAACGATGCGACGGTACCGGCGCAGACGCCGATACCGCGAAAAGATGTTATCATCGATTCGATGGCCGGGAGCACCGTTTACAGTGCTCTCGACTTGCGAGATGGATTTTATCAAATCCTAATGCGTGAGAGCGATATCCCTCTCACGGCAGTGAGCACGCCAAGCGGCATGCTCTGGGAATGGCTAGTAATGCCACAGGGGCTTAAGAACGCCCCTGCGACTTTCAACAGGTGCGTGACGCACTTGTTGCGCTCGGTGCGCGACTTCGCACCGAGCTACTTCGATGATGTATTCATCCACAGCCGGGCTGTGGACGGGAAGACCGACGTAGAGATGCACAGGGTGCATCTCCGGAAGCTACTTGAGCTTATGCGAAAGCATAAGCTCTACGCGAACCTGAAGAAGTGTATCTTCGGGGCGAGCGAGATACCCGTCCTCGGGTGTCTCGTAGGGAAGAATGGTGTTCGCCCTGACCCGGAAAAGGTCAGAGTGATCAATGAATGGCCAACGCCTTCAAGTGTCAAGGAACTGAGGCAGTTCCTTGGCTTGGCCACGTACTTGTGCAAGTACGTGGAGGATTATGCGGGCAAGATCCGCCCGCTGTCACAGCTTCTTAAGAAAGAAGCTGTGTGGAATTGGACACCCGATTGCCAAAAGGCATTCGATGCAGTCAAGCGGGGCTTGACTGAGGCGCCGATCTTGGCAGTGGCTGACCAAGATCGCCCATTTCACGTAGTGTGTGACGCATCCGATTTCGCGATCGGATGCGCGTTGATGCAGCACGATCACGAGGGCCGTGATCGTGTCGTCTACTACCAATCGCGTCAGCTGAAGCCAGCTGAGCGCAACTATCCGGTGCATGACAAGGAACTCCTTGCCATGAAGTATGCACTCGCAAAGTTCCGAGTGTACTTGCTTGGGAGTAGACCATTTGTGGTCTACACCGACCATGCTTCACTGCGCACCGCAGTGAAGTCGCCACACATTTCACAAAGAATGGCGAGATGGCTCTCATTCTTTGCGGAGTATAACTTCCGGGTCGAATACAAACCCGGAAGATTGAACGTGGTGGCCGACGCGTTATCACGTCGGCCGGACTATGCAGAAGCTGTTGACGTCAATGCCATTGACGCCATGCGATCGAGCAAACCCACATCATCTCTGTTGGATGATGTGAAGGCCGCGTACGCGCACGACGCGGACGCGAAGCTCTTGCTGGCCTATGGCACAGCGCCTTCTGACAAGTCCCGTCAGAAGCTGCCCAAGCACCTTCGAGCGCGTGCACACCGCTTTCGTGTGCACGACGGACTACTGCTTTACAATGCAGTCGACGACAACGCGGATCGCGTTGTCGTGCCAAATGACCATGACCTGCGACTCAGGATCATGTACGAGTATCATGATGCCCCGACTGCGGGACATCTCGGACGTGAGAAGACTTACGTCCTTCTCACGCGCGACTTCTACTGGCACCACCAGTATAAGTGGGTGCGCAAGTACATCCGTGCTTGCGAGGTATGCCAACGCGTAAAGCCTGCGCCATTCGCGCAGGCTCCACTGCAATCACTACCGACTCCGTCGGAGTGTTGGAAGTCCATGTCTTTGGACTTCATCTTTGGTCTTCCCCCGGACAGCGGAGGGAATACCGGTGTTGTGGTCTTCGTCGACCGCTTCAGCAAGATGGTACATCTTGCTGCGGTGCCGGCAGAAGTGACCGCGAAGCAGACGGCCCGTCTGTTCGTCGACATGGTGTTCAAACACCATGGCATGCCGACCGACATCGTGTCGGACAGAGACCCGCGCTTCACAGCGCACCTGTGGCAAGAAGTGTTTACACTTCTTGGGAGCCAGCTTTCCATGTCGACTGCGGATCATCCGCAGACGGACGGTCAAACCGAGCGCGTGAATCGCGTGCTCGTCGATATGTTGAAGAGCTACGCTCACTCGTTCCAATACTGGAGCGAGTGCTTATCGATGGCAGAGTTTGCCATCAATAACTCAGTGCATGCCTCGACCGGGCATACACCGTTCTACGTGAATGCCATGCGGCATCCACGTCTACCGAGTTTACTCGGAGTGATGGCTCCCACTTTAAGTGGGGGAGGATCTACGACTGCAATACAGCAGCCGCAGAAAACCGCTGACACTTGCACAGTGTCAGCTGCAACAATGGACAAACCACATGAGTCTGCGCAGGGCGCAGACTCCCCCAACAACAAGGCCAACGACCACGGGTCTGCGCAGGGCGCAGACACCGCAAAGAACCACGCAGAGGCCGGGCCTCTAGCGGAGAGCGAGCTGAATGACTTCAGCTCGGATGCAATCAGTTTCATCACCAAAAGACAAGCCGTGATTCGGTTTGTCCAAGACACAATAGCAGCTTCTGTTGATCAACAGAAGCTGAACGCAGACAATGCGGGCAGAGGCAACACAAATGAATTTAAAGTTGGTTCATTAGTTTTGTTAGCTACACAAA OLD KEY: TGAACGCAGACAATGCGGGCAGAGGCAACACAAAT NEW KEY: TAAAGTTGGTTCATTAGTTTTGTTAGCTACACAAA ........ _A_ 0XXX00000000X00X00000000X000X0X0XXXX0000000X1X0X000X0000000X000000X00XX0099 __89__ ........ _T_ X0000XX00XX00XX00XXXX0XX000X0000000000X000X00000X0000XXX0000XXX000000000011 __89__ ........ _G_ 0000X00XX0000000X0000X000X0000000000000X000090000X00X0000XX00000XX0X000X000 __89__ ........ _C_ 00000000000X00000000000000X00X0X0000XX00XX0000X000X00000X000000X0000X000X00 __89__ ........ _N_ 000000000000000000000000000000000000000000000000000000000000000000000000000 __89__ ........ ALL wwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwvvuuutssrrqqpponlj __89__ ******** *** ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^**************************************** __89__ ######## CNS TAAAGTTGGTTCATTAGTTTTGTTAGCTACACAAAACCTGCCTAgACATGCAGTTTCGGATTTCGGAGCAAGCaa __89__ ######## QLT XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX+XXXXXXXXXXXXXXXXXXXXXXXXXXXX++ __89__ >CONSENSUS__89__ Length: 3564 [gain: 40] ATGGCGTCGAGGTGACGAAGGCGTGTCAACTCCGGGAGTTGACGCTGCAAACAGTGCGGACGGTTGCAAACGTACCGCACTGACGCAATTTGCATGCTGTCGTGCAGCCGGGCTGCACGACGAAGCGCCATGCGATCAAGCCGGGCTTGATATCGCGCGCCCGCAGACAGGGTCTGCCGGCGAAGGGACACATTACCGTGCAGCCGGGCTGCACGAAGGAAAATGCGGTCAAGCCGGGCTTGATACCGCGCGCCCGCGGACAGGGTCCGCCGGCGAACGACTGTCCACGGCCGGGCCTGGACCAGAAGAACAACTGTGCGGAGCCGGGCTCCGCACAACAAGAAGACGGCGCAAGCGGAAAACGCTGCGCAAGTCTCGGTCCGGGACCGAGACGCAACAAGAGCAGTCTGCTGGGCAGACTGCGGCGGTGACGCCGAATGTCAAGACGCTAAGCGTCTTGACGCGCACCGATACTGGATTCCAGTATCGTGACATGGAACTCGCTAGTCCTCCGACGACGGCGTCGGAGTTGACTTCGCTTCCAGCCATGAGCTGGAAGCGCTTCACGCGCGACTTGCACGATGGACGCATCGAGCAAGTCTGCGTTCTTTCGGACAGCGAAAGAACGGAGAGCGAGAGCGAAGAGCTGAGGCAGCTCTTCATGGGAAGTACCACTGAGAGTGAAGACACTCTCAGTGCGAAGACGAAGCGAGAGCGCTTCGAGGAACAAGGTTGGGACTCGCTGAAGTCGAGTCCCTATTACGAATTGTTGAGGGAGTACAAAGACGTACTCCCGGAAGAGATTCCTGCGGAGCTTCCGCAGGATAAGGGCATTCAGCACGAGATTGATCTCGTGCCGGGCACGAAGTACTGTGTCACGCGGCAGTGGCCACTGCCGCGAGAGCAAGTGAAAGCGATCGACGACTTCTTTGAAAGTCGTCGTAAAGCAGGACAAGTGCGGGAATCAAAGTCCCCGCACAGTGCTCCGACGTTCTGTGTCAAGAAGCCACAGGGCGGATGGCGCATCGTTCATGCCTACAACAAGCTGAACGATGCGACGGTACCGGCGCAGACGCCGATACCGCGAAAAGATGTTATCATCGATTCGATGGCCGGGAGCACCGTTTACAGTGCTCTCGACTTGCGAGATGGATTTTATCAAATCCTAATGCGTGAGAGCGATATCCCTCTCACGGCAGTGAGCACGCCAAGCGGCATGCTCTGGGAATGGCTAGTAATGCCACAGGGGCTTAAGAACGCCCCTGCGACTTTCAACAGGTGCGTGACGCACTTGTTGCGCTCGGTGCGCGACTTCGCACCGAGCTACTTCGATGATGTATTCATCCACAGCCGGGCTGTGGACGGGAAGACCGACGTAGAGATGCACAGGGTGCATCTCCGGAAGCTACTTGAGCTTATGCGAAAGCATAAGCTCTACGCGAACCTGAAGAAGTGTATCTTCGGGGCGAGCGAGATACCCGTCCTCGGGTGTCTCGTAGGGAAGAATGGTGTTCGCCCTGACCCGGAAAAGGTCAGAGTGATCAATGAATGGCCAACGCCTTCAAGTGTCAAGGAACTGAGGCAGTTCCTTGGCTTGGCCACGTACTTGTGCAAGTACGTGGAGGATTATGCGGGCAAGATCCGCCCGCTGTCACAGCTTCTTAAGAAAGAAGCTGTGTGGAATTGGACACCCGATTGCCAAAAGGCATTCGATGCAGTCAAGCGGGGCTTGACTGAGGCGCCGATCTTGGCAGTGGCTGACCAAGATCGCCCATTTCACGTAGTGTGTGACGCATCCGATTTCGCGATCGGATGCGCGTTGATGCAGCACGATCACGAGGGCCGTGATCGTGTCGTCTACTACCAATCGCGTCAGCTGAAGCCAGCTGAGCGCAACTATCCGGTGCATGACAAGGAACTCCTTGCCATGAAGTATGCACTCGCAAAGTTCCGAGTGTACTTGCTTGGGAGTAGACCATTTGTGGTCTACACCGACCATGCTTCACTGCGCACCGCAGTGAAGTCGCCACACATTTCACAAAGAATGGCGAGATGGCTCTCATTCTTTGCGGAGTATAACTTCCGGGTCGAATACAAACCCGGAAGATTGAACGTGGTGGCCGACGCGTTATCACGTCGGCCGGACTATGCAGAAGCTGTTGACGTCAATGCCATTGACGCCATGCGATCGAGCAAACCCACATCATCTCTGTTGGATGATGTGAAGGCCGCGTACGCGCACGACGCGGACGCGAAGCTCTTGCTGGCCTATGGCACAGCGCCTTCTGACAAGTCCCGTCAGAAGCTGCCCAAGCACCTTCGAGCGCGTGCACACCGCTTTCGTGTGCACGACGGACTACTGCTTTACAATGCAGTCGACGACAACGCGGATCGCGTTGTCGTGCCAAATGACCATGACCTGCGACTCAGGATCATGTACGAGTATCATGATGCCCCGACTGCGGGACATCTCGGACGTGAGAAGACTTACGTCCTTCTCACGCGCGACTTCTACTGGCACCACCAGTATAAGTGGGTGCGCAAGTACATCCGTGCTTGCGAGGTATGCCAACGCGTAAAGCCTGCGCCATTCGCGCAGGCTCCACTGCAATCACTACCGACTCCGTCGGAGTGTTGGAAGTCCATGTCTTTGGACTTCATCTTTGGTCTTCCCCCGGACAGCGGAGGGAATACCGGTGTTGTGGTCTTCGTCGACCGCTTCAGCAAGATGGTACATCTTGCTGCGGTGCCGGCAGAAGTGACCGCGAAGCAGACGGCCCGTCTGTTCGTCGACATGGTGTTCAAACACCATGGCATGCCGACCGACATCGTGTCGGACAGAGACCCGCGCTTCACAGCGCACCTGTGGCAAGAAGTGTTTACACTTCTTGGGAGCCAGCTTTCCATGTCGACTGCGGATCATCCGCAGACGGACGGTCAAACCGAGCGCGTGAATCGCGTGCTCGTCGATATGTTGAAGAGCTACGCTCACTCGTTCCAATACTGGAGCGAGTGCTTATCGATGGCAGAGTTTGCCATCAATAACTCAGTGCATGCCTCGACCGGGCATACACCGTTCTACGTGAATGCCATGCGGCATCCACGTCTACCGAGTTTACTCGGAGTGATGGCTCCCACTTTAAGTGGGGGAGGATCTACGACTGCAATACAGCAGCCGCAGAAAACCGCTGACACTTGCACAGTGTCAGCTGCAACAATGGACAAACCACATGAGTCTGCGCAGGGCGCAGACTCCCCCAACAACAAGGCCAACGACCACGGGTCTGCGCAGGGCGCAGACACCGCAAAGAACCACGCAGAGGCCGGGCCTCTAGCGGAGAGCGAGCTGAATGACTTCAGCTCGGATGCAATCAGTTTCATCACCAAAAGACAAGCCGTGATTCGGTTTGTCCAAGACACAATAGCAGCTTCTGTTGATCAACAGAAGCTGAACGCAGACAATGCGGGCAGAGGCAACACAAATGAATTTAAAGTTGGTTCATTAGTTTTGTTAGCTACACAAAACCTGCCTAGACATGCAGTTTCGGATTTCGGAGCAAGCAA OLD KEY: TAAAGTTGGTTCATTAGTTTTGTTAGCTACACAAA NEW KEY: CCTAGACATGCAGTTTCGGATTTCGGAGCAAGCAA ........ _A_ 000X0X0X000X0000000X000000X00XX00XX0000000000000000X00000000000X0000000010X __90__ ........ _T_ 00X00000X0000XXX0000XXX00000000000000XX00X000000XX00X0000000XX00090X0XX0000 __90__ ........ _G_ 0000X0000X00X0000XX00000XX0X000X000X000X0000X0X0000000XXX00X000000X0X009900 __90__ ........ _C_ XX0000X000X00000X000000X0000X000X000X000X0XX0X0X00X00X000XX000X0X00000000X0 __90__ ........ _N_ 000000000000000000000000000000000000000000000000000000000000000000000000000 __90__ ........ ALL wwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwvvvuuuuttssssrrrqqqqpppooomlkhgd __90__ ******** *** ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^**************************************** __90__ ######## CNS CCTAGACATGCAGTTTCGGATTTCGGAGCAAGCAAGCTTGCTCCGCGCTTCATCGGGCCGTTCACtGTGTTggCA __90__ ######## QLT XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX+XXXXX++XX __90__ >CONSENSUS__90__ Length: 3604 [gain: 40] ATGGCGTCGAGGTGACGAAGGCGTGTCAACTCCGGGAGTTGACGCTGCAAACAGTGCGGACGGTTGCAAACGTACCGCACTGACGCAATTTGCATGCTGTCGTGCAGCCGGGCTGCACGACGAAGCGCCATGCGATCAAGCCGGGCTTGATATCGCGCGCCCGCAGACAGGGTCTGCCGGCGAAGGGACACATTACCGTGCAGCCGGGCTGCACGAAGGAAAATGCGGTCAAGCCGGGCTTGATACCGCGCGCCCGCGGACAGGGTCCGCCGGCGAACGACTGTCCACGGCCGGGCCTGGACCAGAAGAACAACTGTGCGGAGCCGGGCTCCGCACAACAAGAAGACGGCGCAAGCGGAAAACGCTGCGCAAGTCTCGGTCCGGGACCGAGACGCAACAAGAGCAGTCTGCTGGGCAGACTGCGGCGGTGACGCCGAATGTCAAGACGCTAAGCGTCTTGACGCGCACCGATACTGGATTCCAGTATCGTGACATGGAACTCGCTAGTCCTCCGACGACGGCGTCGGAGTTGACTTCGCTTCCAGCCATGAGCTGGAAGCGCTTCACGCGCGACTTGCACGATGGACGCATCGAGCAAGTCTGCGTTCTTTCGGACAGCGAAAGAACGGAGAGCGAGAGCGAAGAGCTGAGGCAGCTCTTCATGGGAAGTACCACTGAGAGTGAAGACACTCTCAGTGCGAAGACGAAGCGAGAGCGCTTCGAGGAACAAGGTTGGGACTCGCTGAAGTCGAGTCCCTATTACGAATTGTTGAGGGAGTACAAAGACGTACTCCCGGAAGAGATTCCTGCGGAGCTTCCGCAGGATAAGGGCATTCAGCACGAGATTGATCTCGTGCCGGGCACGAAGTACTGTGTCACGCGGCAGTGGCCACTGCCGCGAGAGCAAGTGAAAGCGATCGACGACTTCTTTGAAAGTCGTCGTAAAGCAGGACAAGTGCGGGAATCAAAGTCCCCGCACAGTGCTCCGACGTTCTGTGTCAAGAAGCCACAGGGCGGATGGCGCATCGTTCATGCCTACAACAAGCTGAACGATGCGACGGTACCGGCGCAGACGCCGATACCGCGAAAAGATGTTATCATCGATTCGATGGCCGGGAGCACCGTTTACAGTGCTCTCGACTTGCGAGATGGATTTTATCAAATCCTAATGCGTGAGAGCGATATCCCTCTCACGGCAGTGAGCACGCCAAGCGGCATGCTCTGGGAATGGCTAGTAATGCCACAGGGGCTTAAGAACGCCCCTGCGACTTTCAACAGGTGCGTGACGCACTTGTTGCGCTCGGTGCGCGACTTCGCACCGAGCTACTTCGATGATGTATTCATCCACAGCCGGGCTGTGGACGGGAAGACCGACGTAGAGATGCACAGGGTGCATCTCCGGAAGCTACTTGAGCTTATGCGAAAGCATAAGCTCTACGCGAACCTGAAGAAGTGTATCTTCGGGGCGAGCGAGATACCCGTCCTCGGGTGTCTCGTAGGGAAGAATGGTGTTCGCCCTGACCCGGAAAAGGTCAGAGTGATCAATGAATGGCCAACGCCTTCAAGTGTCAAGGAACTGAGGCAGTTCCTTGGCTTGGCCACGTACTTGTGCAAGTACGTGGAGGATTATGCGGGCAAGATCCGCCCGCTGTCACAGCTTCTTAAGAAAGAAGCTGTGTGGAATTGGACACCCGATTGCCAAAAGGCATTCGATGCAGTCAAGCGGGGCTTGACTGAGGCGCCGATCTTGGCAGTGGCTGACCAAGATCGCCCATTTCACGTAGTGTGTGACGCATCCGATTTCGCGATCGGATGCGCGTTGATGCAGCACGATCACGAGGGCCGTGATCGTGTCGTCTACTACCAATCGCGTCAGCTGAAGCCAGCTGAGCGCAACTATCCGGTGCATGACAAGGAACTCCTTGCCATGAAGTATGCACTCGCAAAGTTCCGAGTGTACTTGCTTGGGAGTAGACCATTTGTGGTCTACACCGACCATGCTTCACTGCGCACCGCAGTGAAGTCGCCACACATTTCACAAAGAATGGCGAGATGGCTCTCATTCTTTGCGGAGTATAACTTCCGGGTCGAATACAAACCCGGAAGATTGAACGTGGTGGCCGACGCGTTATCACGTCGGCCGGACTATGCAGAAGCTGTTGACGTCAATGCCATTGACGCCATGCGATCGAGCAAACCCACATCATCTCTGTTGGATGATGTGAAGGCCGCGTACGCGCACGACGCGGACGCGAAGCTCTTGCTGGCCTATGGCACAGCGCCTTCTGACAAGTCCCGTCAGAAGCTGCCCAAGCACCTTCGAGCGCGTGCACACCGCTTTCGTGTGCACGACGGACTACTGCTTTACAATGCAGTCGACGACAACGCGGATCGCGTTGTCGTGCCAAATGACCATGACCTGCGACTCAGGATCATGTACGAGTATCATGATGCCCCGACTGCGGGACATCTCGGACGTGAGAAGACTTACGTCCTTCTCACGCGCGACTTCTACTGGCACCACCAGTATAAGTGGGTGCGCAAGTACATCCGTGCTTGCGAGGTATGCCAACGCGTAAAGCCTGCGCCATTCGCGCAGGCTCCACTGCAATCACTACCGACTCCGTCGGAGTGTTGGAAGTCCATGTCTTTGGACTTCATCTTTGGTCTTCCCCCGGACAGCGGAGGGAATACCGGTGTTGTGGTCTTCGTCGACCGCTTCAGCAAGATGGTACATCTTGCTGCGGTGCCGGCAGAAGTGACCGCGAAGCAGACGGCCCGTCTGTTCGTCGACATGGTGTTCAAACACCATGGCATGCCGACCGACATCGTGTCGGACAGAGACCCGCGCTTCACAGCGCACCTGTGGCAAGAAGTGTTTACACTTCTTGGGAGCCAGCTTTCCATGTCGACTGCGGATCATCCGCAGACGGACGGTCAAACCGAGCGCGTGAATCGCGTGCTCGTCGATATGTTGAAGAGCTACGCTCACTCGTTCCAATACTGGAGCGAGTGCTTATCGATGGCAGAGTTTGCCATCAATAACTCAGTGCATGCCTCGACCGGGCATACACCGTTCTACGTGAATGCCATGCGGCATCCACGTCTACCGAGTTTACTCGGAGTGATGGCTCCCACTTTAAGTGGGGGAGGATCTACGACTGCAATACAGCAGCCGCAGAAAACCGCTGACACTTGCACAGTGTCAGCTGCAACAATGGACAAACCACATGAGTCTGCGCAGGGCGCAGACTCCCCCAACAACAAGGCCAACGACCACGGGTCTGCGCAGGGCGCAGACACCGCAAAGAACCACGCAGAGGCCGGGCCTCTAGCGGAGAGCGAGCTGAATGACTTCAGCTCGGATGCAATCAGTTTCATCACCAAAAGACAAGCCGTGATTCGGTTTGTCCAAGACACAATAGCAGCTTCTGTTGATCAACAGAAGCTGAACGCAGACAATGCGGGCAGAGGCAACACAAATGAATTTAAAGTTGGTTCATTAGTTTTGTTAGCTACACAAAACCTGCCTAGACATGCAGTTTCGGATTTCGGAGCAAGCAAGCTTGCTCCGCGCTTCATCGGGCCGTTCACTGTGTTGGCA OLD KEY: CCTAGACATGCAGTTTCGGATTTCGGAGCAAGCAA NEW KEY: CTCCGCGCTTCATCGGGCCGTTCACTGTGTTGGCA ........ _A_ 00000000000X00000000000X0000000000X0000X0000X90008090X010090909090000009009 __91__ ........ _T_ 0X000000XX00X0000000XX000X0X0XX00000000000000000029000000900000X000090X0000 __91__ ........ _G_ 0000X0X0000000XXX00X000000X0X00XX000XX000XX000090000000900090000000X0000900 __91__ ........ _C_ X0XX0X0X00X00X000XX000X0X00000000X0X00X0X00X0090X0009090X0000X0009X01900090 __91__ ........ _N_ 000000000000000000000000000000000000000000000000000000000000000000000000000 __91__ ........ ALL wwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwvvvuuttssrrqppooolig __91__ ******** *** ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^**************************************** __91__ ######## CNS CTCCGCGCTTCATCGGGCCGTTCACTGTGTTGGCACGGCACGGCAacgCatacAcgCtagaCaTacCGtcTagca __91__ ######## QLT XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX+++X++++X++X++++X+X++XX++X++++ __91__ >CONSENSUS__91__ Length: 3644 [gain: 40] ATGGCGTCGAGGTGACGAAGGCGTGTCAACTCCGGGAGTTGACGCTGCAAACAGTGCGGACGGTTGCAAACGTACCGCACTGACGCAATTTGCATGCTGTCGTGCAGCCGGGCTGCACGACGAAGCGCCATGCGATCAAGCCGGGCTTGATATCGCGCGCCCGCAGACAGGGTCTGCCGGCGAAGGGACACATTACCGTGCAGCCGGGCTGCACGAAGGAAAATGCGGTCAAGCCGGGCTTGATACCGCGCGCCCGCGGACAGGGTCCGCCGGCGAACGACTGTCCACGGCCGGGCCTGGACCAGAAGAACAACTGTGCGGAGCCGGGCTCCGCACAACAAGAAGACGGCGCAAGCGGAAAACGCTGCGCAAGTCTCGGTCCGGGACCGAGACGCAACAAGAGCAGTCTGCTGGGCAGACTGCGGCGGTGACGCCGAATGTCAAGACGCTAAGCGTCTTGACGCGCACCGATACTGGATTCCAGTATCGTGACATGGAACTCGCTAGTCCTCCGACGACGGCGTCGGAGTTGACTTCGCTTCCAGCCATGAGCTGGAAGCGCTTCACGCGCGACTTGCACGATGGACGCATCGAGCAAGTCTGCGTTCTTTCGGACAGCGAAAGAACGGAGAGCGAGAGCGAAGAGCTGAGGCAGCTCTTCATGGGAAGTACCACTGAGAGTGAAGACACTCTCAGTGCGAAGACGAAGCGAGAGCGCTTCGAGGAACAAGGTTGGGACTCGCTGAAGTCGAGTCCCTATTACGAATTGTTGAGGGAGTACAAAGACGTACTCCCGGAAGAGATTCCTGCGGAGCTTCCGCAGGATAAGGGCATTCAGCACGAGATTGATCTCGTGCCGGGCACGAAGTACTGTGTCACGCGGCAGTGGCCACTGCCGCGAGAGCAAGTGAAAGCGATCGACGACTTCTTTGAAAGTCGTCGTAAAGCAGGACAAGTGCGGGAATCAAAGTCCCCGCACAGTGCTCCGACGTTCTGTGTCAAGAAGCCACAGGGCGGATGGCGCATCGTTCATGCCTACAACAAGCTGAACGATGCGACGGTACCGGCGCAGACGCCGATACCGCGAAAAGATGTTATCATCGATTCGATGGCCGGGAGCACCGTTTACAGTGCTCTCGACTTGCGAGATGGATTTTATCAAATCCTAATGCGTGAGAGCGATATCCCTCTCACGGCAGTGAGCACGCCAAGCGGCATGCTCTGGGAATGGCTAGTAATGCCACAGGGGCTTAAGAACGCCCCTGCGACTTTCAACAGGTGCGTGACGCACTTGTTGCGCTCGGTGCGCGACTTCGCACCGAGCTACTTCGATGATGTATTCATCCACAGCCGGGCTGTGGACGGGAAGACCGACGTAGAGATGCACAGGGTGCATCTCCGGAAGCTACTTGAGCTTATGCGAAAGCATAAGCTCTACGCGAACCTGAAGAAGTGTATCTTCGGGGCGAGCGAGATACCCGTCCTCGGGTGTCTCGTAGGGAAGAATGGTGTTCGCCCTGACCCGGAAAAGGTCAGAGTGATCAATGAATGGCCAACGCCTTCAAGTGTCAAGGAACTGAGGCAGTTCCTTGGCTTGGCCACGTACTTGTGCAAGTACGTGGAGGATTATGCGGGCAAGATCCGCCCGCTGTCACAGCTTCTTAAGAAAGAAGCTGTGTGGAATTGGACACCCGATTGCCAAAAGGCATTCGATGCAGTCAAGCGGGGCTTGACTGAGGCGCCGATCTTGGCAGTGGCTGACCAAGATCGCCCATTTCACGTAGTGTGTGACGCATCCGATTTCGCGATCGGATGCGCGTTGATGCAGCACGATCACGAGGGCCGTGATCGTGTCGTCTACTACCAATCGCGTCAGCTGAAGCCAGCTGAGCGCAACTATCCGGTGCATGACAAGGAACTCCTTGCCATGAAGTATGCACTCGCAAAGTTCCGAGTGTACTTGCTTGGGAGTAGACCATTTGTGGTCTACACCGACCATGCTTCACTGCGCACCGCAGTGAAGTCGCCACACATTTCACAAAGAATGGCGAGATGGCTCTCATTCTTTGCGGAGTATAACTTCCGGGTCGAATACAAACCCGGAAGATTGAACGTGGTGGCCGACGCGTTATCACGTCGGCCGGACTATGCAGAAGCTGTTGACGTCAATGCCATTGACGCCATGCGATCGAGCAAACCCACATCATCTCTGTTGGATGATGTGAAGGCCGCGTACGCGCACGACGCGGACGCGAAGCTCTTGCTGGCCTATGGCACAGCGCCTTCTGACAAGTCCCGTCAGAAGCTGCCCAAGCACCTTCGAGCGCGTGCACACCGCTTTCGTGTGCACGACGGACTACTGCTTTACAATGCAGTCGACGACAACGCGGATCGCGTTGTCGTGCCAAATGACCATGACCTGCGACTCAGGATCATGTACGAGTATCATGATGCCCCGACTGCGGGACATCTCGGACGTGAGAAGACTTACGTCCTTCTCACGCGCGACTTCTACTGGCACCACCAGTATAAGTGGGTGCGCAAGTACATCCGTGCTTGCGAGGTATGCCAACGCGTAAAGCCTGCGCCATTCGCGCAGGCTCCACTGCAATCACTACCGACTCCGTCGGAGTGTTGGAAGTCCATGTCTTTGGACTTCATCTTTGGTCTTCCCCCGGACAGCGGAGGGAATACCGGTGTTGTGGTCTTCGTCGACCGCTTCAGCAAGATGGTACATCTTGCTGCGGTGCCGGCAGAAGTGACCGCGAAGCAGACGGCCCGTCTGTTCGTCGACATGGTGTTCAAACACCATGGCATGCCGACCGACATCGTGTCGGACAGAGACCCGCGCTTCACAGCGCACCTGTGGCAAGAAGTGTTTACACTTCTTGGGAGCCAGCTTTCCATGTCGACTGCGGATCATCCGCAGACGGACGGTCAAACCGAGCGCGTGAATCGCGTGCTCGTCGATATGTTGAAGAGCTACGCTCACTCGTTCCAATACTGGAGCGAGTGCTTATCGATGGCAGAGTTTGCCATCAATAACTCAGTGCATGCCTCGACCGGGCATACACCGTTCTACGTGAATGCCATGCGGCATCCACGTCTACCGAGTTTACTCGGAGTGATGGCTCCCACTTTAAGTGGGGGAGGATCTACGACTGCAATACAGCAGCCGCAGAAAACCGCTGACACTTGCACAGTGTCAGCTGCAACAATGGACAAACCACATGAGTCTGCGCAGGGCGCAGACTCCCCCAACAACAAGGCCAACGACCACGGGTCTGCGCAGGGCGCAGACACCGCAAAGAACCACGCAGAGGCCGGGCCTCTAGCGGAGAGCGAGCTGAATGACTTCAGCTCGGATGCAATCAGTTTCATCACCAAAAGACAAGCCGTGATTCGGTTTGTCCAAGACACAATAGCAGCTTCTGTTGATCAACAGAAGCTGAACGCAGACAATGCGGGCAGAGGCAACACAAATGAATTTAAAGTTGGTTCATTAGTTTTGTTAGCTACACAAAACCTGCCTAGACATGCAGTTTCGGATTTCGGAGCAAGCAAGCTTGCTCCGCGCTTCATCGGGCCGTTCACTGTGTTGGCACGGCACGGCAACGCATACACGCTAGACATACCGTCTAGCA OLD KEY: CTCCGCGCTTCATCGGGCCGTTCACTGTGTTGGCA NEW KEY: CGGCAACGCATACACGCTAGACATACCGTCTAGCA ........ _A_ 0000XX000X0X0X0000X0X0X0X000000X00X000000000X0000X000000X0000009000000XX000 __92__ ........ _T_ 0000000000X000000X00000X0000X0X0000X00000X000X000000XXXX000X000000009000000 __92__ ........ _G_ 0XX0000X0000000X000X0000000X0000X000X0X000000000X000000000X00XX10XX00900X00 __92__ ........ _C_ X00X00X0X000X0X0X0000X000XX00X000X000X0XX0XX00XX00XX00000X00X000X00900000XX __92__ ........ _N_ 000000000000000000000000000000000000000000000000000000000000000000000000000 __92__ ........ ALL wwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwvuutsssrrqqqpppooomjh __92__ ******** *** ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^**************************************** __92__ ######## CNS CGGCAACGCATACACGCTAGACATACCGTCTAGCATGCGCCTCCATCCGACCTTTTACGTCGGaCGGctgAAGCC __92__ ######## QLT XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX+XXX+++XXXXX __92__ >CONSENSUS__92__ Length: 3684 [gain: 40] ATGGCGTCGAGGTGACGAAGGCGTGTCAACTCCGGGAGTTGACGCTGCAAACAGTGCGGACGGTTGCAAACGTACCGCACTGACGCAATTTGCATGCTGTCGTGCAGCCGGGCTGCACGACGAAGCGCCATGCGATCAAGCCGGGCTTGATATCGCGCGCCCGCAGACAGGGTCTGCCGGCGAAGGGACACATTACCGTGCAGCCGGGCTGCACGAAGGAAAATGCGGTCAAGCCGGGCTTGATACCGCGCGCCCGCGGACAGGGTCCGCCGGCGAACGACTGTCCACGGCCGGGCCTGGACCAGAAGAACAACTGTGCGGAGCCGGGCTCCGCACAACAAGAAGACGGCGCAAGCGGAAAACGCTGCGCAAGTCTCGGTCCGGGACCGAGACGCAACAAGAGCAGTCTGCTGGGCAGACTGCGGCGGTGACGCCGAATGTCAAGACGCTAAGCGTCTTGACGCGCACCGATACTGGATTCCAGTATCGTGACATGGAACTCGCTAGTCCTCCGACGACGGCGTCGGAGTTGACTTCGCTTCCAGCCATGAGCTGGAAGCGCTTCACGCGCGACTTGCACGATGGACGCATCGAGCAAGTCTGCGTTCTTTCGGACAGCGAAAGAACGGAGAGCGAGAGCGAAGAGCTGAGGCAGCTCTTCATGGGAAGTACCACTGAGAGTGAAGACACTCTCAGTGCGAAGACGAAGCGAGAGCGCTTCGAGGAACAAGGTTGGGACTCGCTGAAGTCGAGTCCCTATTACGAATTGTTGAGGGAGTACAAAGACGTACTCCCGGAAGAGATTCCTGCGGAGCTTCCGCAGGATAAGGGCATTCAGCACGAGATTGATCTCGTGCCGGGCACGAAGTACTGTGTCACGCGGCAGTGGCCACTGCCGCGAGAGCAAGTGAAAGCGATCGACGACTTCTTTGAAAGTCGTCGTAAAGCAGGACAAGTGCGGGAATCAAAGTCCCCGCACAGTGCTCCGACGTTCTGTGTCAAGAAGCCACAGGGCGGATGGCGCATCGTTCATGCCTACAACAAGCTGAACGATGCGACGGTACCGGCGCAGACGCCGATACCGCGAAAAGATGTTATCATCGATTCGATGGCCGGGAGCACCGTTTACAGTGCTCTCGACTTGCGAGATGGATTTTATCAAATCCTAATGCGTGAGAGCGATATCCCTCTCACGGCAGTGAGCACGCCAAGCGGCATGCTCTGGGAATGGCTAGTAATGCCACAGGGGCTTAAGAACGCCCCTGCGACTTTCAACAGGTGCGTGACGCACTTGTTGCGCTCGGTGCGCGACTTCGCACCGAGCTACTTCGATGATGTATTCATCCACAGCCGGGCTGTGGACGGGAAGACCGACGTAGAGATGCACAGGGTGCATCTCCGGAAGCTACTTGAGCTTATGCGAAAGCATAAGCTCTACGCGAACCTGAAGAAGTGTATCTTCGGGGCGAGCGAGATACCCGTCCTCGGGTGTCTCGTAGGGAAGAATGGTGTTCGCCCTGACCCGGAAAAGGTCAGAGTGATCAATGAATGGCCAACGCCTTCAAGTGTCAAGGAACTGAGGCAGTTCCTTGGCTTGGCCACGTACTTGTGCAAGTACGTGGAGGATTATGCGGGCAAGATCCGCCCGCTGTCACAGCTTCTTAAGAAAGAAGCTGTGTGGAATTGGACACCCGATTGCCAAAAGGCATTCGATGCAGTCAAGCGGGGCTTGACTGAGGCGCCGATCTTGGCAGTGGCTGACCAAGATCGCCCATTTCACGTAGTGTGTGACGCATCCGATTTCGCGATCGGATGCGCGTTGATGCAGCACGATCACGAGGGCCGTGATCGTGTCGTCTACTACCAATCGCGTCAGCTGAAGCCAGCTGAGCGCAACTATCCGGTGCATGACAAGGAACTCCTTGCCATGAAGTATGCACTCGCAAAGTTCCGAGTGTACTTGCTTGGGAGTAGACCATTTGTGGTCTACACCGACCATGCTTCACTGCGCACCGCAGTGAAGTCGCCACACATTTCACAAAGAATGGCGAGATGGCTCTCATTCTTTGCGGAGTATAACTTCCGGGTCGAATACAAACCCGGAAGATTGAACGTGGTGGCCGACGCGTTATCACGTCGGCCGGACTATGCAGAAGCTGTTGACGTCAATGCCATTGACGCCATGCGATCGAGCAAACCCACATCATCTCTGTTGGATGATGTGAAGGCCGCGTACGCGCACGACGCGGACGCGAAGCTCTTGCTGGCCTATGGCACAGCGCCTTCTGACAAGTCCCGTCAGAAGCTGCCCAAGCACCTTCGAGCGCGTGCACACCGCTTTCGTGTGCACGACGGACTACTGCTTTACAATGCAGTCGACGACAACGCGGATCGCGTTGTCGTGCCAAATGACCATGACCTGCGACTCAGGATCATGTACGAGTATCATGATGCCCCGACTGCGGGACATCTCGGACGTGAGAAGACTTACGTCCTTCTCACGCGCGACTTCTACTGGCACCACCAGTATAAGTGGGTGCGCAAGTACATCCGTGCTTGCGAGGTATGCCAACGCGTAAAGCCTGCGCCATTCGCGCAGGCTCCACTGCAATCACTACCGACTCCGTCGGAGTGTTGGAAGTCCATGTCTTTGGACTTCATCTTTGGTCTTCCCCCGGACAGCGGAGGGAATACCGGTGTTGTGGTCTTCGTCGACCGCTTCAGCAAGATGGTACATCTTGCTGCGGTGCCGGCAGAAGTGACCGCGAAGCAGACGGCCCGTCTGTTCGTCGACATGGTGTTCAAACACCATGGCATGCCGACCGACATCGTGTCGGACAGAGACCCGCGCTTCACAGCGCACCTGTGGCAAGAAGTGTTTACACTTCTTGGGAGCCAGCTTTCCATGTCGACTGCGGATCATCCGCAGACGGACGGTCAAACCGAGCGCGTGAATCGCGTGCTCGTCGATATGTTGAAGAGCTACGCTCACTCGTTCCAATACTGGAGCGAGTGCTTATCGATGGCAGAGTTTGCCATCAATAACTCAGTGCATGCCTCGACCGGGCATACACCGTTCTACGTGAATGCCATGCGGCATCCACGTCTACCGAGTTTACTCGGAGTGATGGCTCCCACTTTAAGTGGGGGAGGATCTACGACTGCAATACAGCAGCCGCAGAAAACCGCTGACACTTGCACAGTGTCAGCTGCAACAATGGACAAACCACATGAGTCTGCGCAGGGCGCAGACTCCCCCAACAACAAGGCCAACGACCACGGGTCTGCGCAGGGCGCAGACACCGCAAAGAACCACGCAGAGGCCGGGCCTCTAGCGGAGAGCGAGCTGAATGACTTCAGCTCGGATGCAATCAGTTTCATCACCAAAAGACAAGCCGTGATTCGGTTTGTCCAAGACACAATAGCAGCTTCTGTTGATCAACAGAAGCTGAACGCAGACAATGCGGGCAGAGGCAACACAAATGAATTTAAAGTTGGTTCATTAGTTTTGTTAGCTACACAAAACCTGCCTAGACATGCAGTTTCGGATTTCGGAGCAAGCAAGCTTGCTCCGCGCTTCATCGGGCCGTTCACTGTGTTGGCACGGCACGGCAACGCATACACGCTAGACATACCGTCTAGCATGCGCCTCCATCCGACCTTTTACGTCGGACGGCTGAAGCC OLD KEY: CGGCAACGCATACACGCTAGACATACCGTCTAGCA NEW KEY: CTCCATCCGACCTTTTACGTCGGACGGCTGAAGCC ........ _A_ 0000X0000X000000X000000X000000XX000X0X00000X00X00X0009000X000000000900009X0 __93__ ........ _T_ 0X000X000000XXXX000X00000000X0000000X0006000000000000090X000900009000000000 __93__ ........ _G_ 00000000X000000000X00XX00XX00X00X00000004X00X000X0X00000009000XX00X0000X00X __93__ ........ _C_ X0XX00XX00XX00000X00X000X00X00000XX000XX00X00X0X000XX00X000X1X00X100XXX0000 __93__ ........ _N_ 000000000000000000000000000000000000000000000000000000000000000000000000000 __93__ ........ ALL wwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwvvvvuttttsrrrqqqqpooomkjig __93__ ******** *** ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^**************************************** __93__ ######## CNS CTCCATCCGACCTTTTACGTCGGACGGCTGAAGCCATACCtGCAGCACGAGCCatCTAgCtCGGCtGaCCCGaAG __93__ ######## QLT XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX!XXXXXXXXXXXX++XXX+X+XXXX+X+XXXX+XX __93__ >CONSENSUS__93__ Length: 3724 [gain: 40] ATGGCGTCGAGGTGACGAAGGCGTGTCAACTCCGGGAGTTGACGCTGCAAACAGTGCGGACGGTTGCAAACGTACCGCACTGACGCAATTTGCATGCTGTCGTGCAGCCGGGCTGCACGACGAAGCGCCATGCGATCAAGCCGGGCTTGATATCGCGCGCCCGCAGACAGGGTCTGCCGGCGAAGGGACACATTACCGTGCAGCCGGGCTGCACGAAGGAAAATGCGGTCAAGCCGGGCTTGATACCGCGCGCCCGCGGACAGGGTCCGCCGGCGAACGACTGTCCACGGCCGGGCCTGGACCAGAAGAACAACTGTGCGGAGCCGGGCTCCGCACAACAAGAAGACGGCGCAAGCGGAAAACGCTGCGCAAGTCTCGGTCCGGGACCGAGACGCAACAAGAGCAGTCTGCTGGGCAGACTGCGGCGGTGACGCCGAATGTCAAGACGCTAAGCGTCTTGACGCGCACCGATACTGGATTCCAGTATCGTGACATGGAACTCGCTAGTCCTCCGACGACGGCGTCGGAGTTGACTTCGCTTCCAGCCATGAGCTGGAAGCGCTTCACGCGCGACTTGCACGATGGACGCATCGAGCAAGTCTGCGTTCTTTCGGACAGCGAAAGAACGGAGAGCGAGAGCGAAGAGCTGAGGCAGCTCTTCATGGGAAGTACCACTGAGAGTGAAGACACTCTCAGTGCGAAGACGAAGCGAGAGCGCTTCGAGGAACAAGGTTGGGACTCGCTGAAGTCGAGTCCCTATTACGAATTGTTGAGGGAGTACAAAGACGTACTCCCGGAAGAGATTCCTGCGGAGCTTCCGCAGGATAAGGGCATTCAGCACGAGATTGATCTCGTGCCGGGCACGAAGTACTGTGTCACGCGGCAGTGGCCACTGCCGCGAGAGCAAGTGAAAGCGATCGACGACTTCTTTGAAAGTCGTCGTAAAGCAGGACAAGTGCGGGAATCAAAGTCCCCGCACAGTGCTCCGACGTTCTGTGTCAAGAAGCCACAGGGCGGATGGCGCATCGTTCATGCCTACAACAAGCTGAACGATGCGACGGTACCGGCGCAGACGCCGATACCGCGAAAAGATGTTATCATCGATTCGATGGCCGGGAGCACCGTTTACAGTGCTCTCGACTTGCGAGATGGATTTTATCAAATCCTAATGCGTGAGAGCGATATCCCTCTCACGGCAGTGAGCACGCCAAGCGGCATGCTCTGGGAATGGCTAGTAATGCCACAGGGGCTTAAGAACGCCCCTGCGACTTTCAACAGGTGCGTGACGCACTTGTTGCGCTCGGTGCGCGACTTCGCACCGAGCTACTTCGATGATGTATTCATCCACAGCCGGGCTGTGGACGGGAAGACCGACGTAGAGATGCACAGGGTGCATCTCCGGAAGCTACTTGAGCTTATGCGAAAGCATAAGCTCTACGCGAACCTGAAGAAGTGTATCTTCGGGGCGAGCGAGATACCCGTCCTCGGGTGTCTCGTAGGGAAGAATGGTGTTCGCCCTGACCCGGAAAAGGTCAGAGTGATCAATGAATGGCCAACGCCTTCAAGTGTCAAGGAACTGAGGCAGTTCCTTGGCTTGGCCACGTACTTGTGCAAGTACGTGGAGGATTATGCGGGCAAGATCCGCCCGCTGTCACAGCTTCTTAAGAAAGAAGCTGTGTGGAATTGGACACCCGATTGCCAAAAGGCATTCGATGCAGTCAAGCGGGGCTTGACTGAGGCGCCGATCTTGGCAGTGGCTGACCAAGATCGCCCATTTCACGTAGTGTGTGACGCATCCGATTTCGCGATCGGATGCGCGTTGATGCAGCACGATCACGAGGGCCGTGATCGTGTCGTCTACTACCAATCGCGTCAGCTGAAGCCAGCTGAGCGCAACTATCCGGTGCATGACAAGGAACTCCTTGCCATGAAGTATGCACTCGCAAAGTTCCGAGTGTACTTGCTTGGGAGTAGACCATTTGTGGTCTACACCGACCATGCTTCACTGCGCACCGCAGTGAAGTCGCCACACATTTCACAAAGAATGGCGAGATGGCTCTCATTCTTTGCGGAGTATAACTTCCGGGTCGAATACAAACCCGGAAGATTGAACGTGGTGGCCGACGCGTTATCACGTCGGCCGGACTATGCAGAAGCTGTTGACGTCAATGCCATTGACGCCATGCGATCGAGCAAACCCACATCATCTCTGTTGGATGATGTGAAGGCCGCGTACGCGCACGACGCGGACGCGAAGCTCTTGCTGGCCTATGGCACAGCGCCTTCTGACAAGTCCCGTCAGAAGCTGCCCAAGCACCTTCGAGCGCGTGCACACCGCTTTCGTGTGCACGACGGACTACTGCTTTACAATGCAGTCGACGACAACGCGGATCGCGTTGTCGTGCCAAATGACCATGACCTGCGACTCAGGATCATGTACGAGTATCATGATGCCCCGACTGCGGGACATCTCGGACGTGAGAAGACTTACGTCCTTCTCACGCGCGACTTCTACTGGCACCACCAGTATAAGTGGGTGCGCAAGTACATCCGTGCTTGCGAGGTATGCCAACGCGTAAAGCCTGCGCCATTCGCGCAGGCTCCACTGCAATCACTACCGACTCCGTCGGAGTGTTGGAAGTCCATGTCTTTGGACTTCATCTTTGGTCTTCCCCCGGACAGCGGAGGGAATACCGGTGTTGTGGTCTTCGTCGACCGCTTCAGCAAGATGGTACATCTTGCTGCGGTGCCGGCAGAAGTGACCGCGAAGCAGACGGCCCGTCTGTTCGTCGACATGGTGTTCAAACACCATGGCATGCCGACCGACATCGTGTCGGACAGAGACCCGCGCTTCACAGCGCACCTGTGGCAAGAAGTGTTTACACTTCTTGGGAGCCAGCTTTCCATGTCGACTGCGGATCATCCGCAGACGGACGGTCAAACCGAGCGCGTGAATCGCGTGCTCGTCGATATGTTGAAGAGCTACGCTCACTCGTTCCAATACTGGAGCGAGTGCTTATCGATGGCAGAGTTTGCCATCAATAACTCAGTGCATGCCTCGACCGGGCATACACCGTTCTACGTGAATGCCATGCGGCATCCACGTCTACCGAGTTTACTCGGAGTGATGGCTCCCACTTTAAGTGGGGGAGGATCTACGACTGCAATACAGCAGCCGCAGAAAACCGCTGACACTTGCACAGTGTCAGCTGCAACAATGGACAAACCACATGAGTCTGCGCAGGGCGCAGACTCCCCCAACAACAAGGCCAACGACCACGGGTCTGCGCAGGGCGCAGACACCGCAAAGAACCACGCAGAGGCCGGGCCTCTAGCGGAGAGCGAGCTGAATGACTTCAGCTCGGATGCAATCAGTTTCATCACCAAAAGACAAGCCGTGATTCGGTTTGTCCAAGACACAATAGCAGCTTCTGTTGATCAACAGAAGCTGAACGCAGACAATGCGGGCAGAGGCAACACAAATGAATTTAAAGTTGGTTCATTAGTTTTGTTAGCTACACAAAACCTGCCTAGACATGCAGTTTCGGATTTCGGAGCAAGCAAGCTTGCTCCGCGCTTCATCGGGCCGTTCACTGTGTTGGCACGGCACGGCAACGCATACACGCTAGACATACCGTCTAGCATGCGCCTCCATCCGACCTTTTACGTCGGACGGCTGAAGCCATACCTGCAGCACGAGCCATCTAGCTCGGCTGACCCGAAG OLD KEY: CTCCATCCGACCTTTTACGTCGGACGGCTGAAGCC NEW KEY: TGCAGCACGAGCCATCTAGCTCGGCTGACCCGAAG ........ _A_ 000X00X00X000X000X000000000X0000XX00000000X00900009000909X00009306000000000 __94__ ........ _T_ X0000000000000X0X000X0000X00000000000X000000000000000000000000000009X000090 __94__ ........ _G_ 0X00X000X0X0000000X000XX00X0000X00X0000XX00XX1X00X19X00X00X09917X1000XX0000 __94__ ........ _C_ 00X00X0X000XX00X000X0X00X000XXX0000XX0X00X000009X0000910000X00000391000XX0X __94__ ........ _N_ 000000000000000000000000000000000000000000000000000000000000000000000000000 __94__ ........ ALL wwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwvvvvuuuutttsssssrrrqqqqpppooonljhgf __94__ ******** *** ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^**************************************** __94__ ######## CNS TGCAGCACGAGCCATCTAGCTCGGCTGACCCGAAGCCTCGGCAGGaGcCGagGcaGaAGCggagGactTGGCCtC __94__ ######## QLT XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX+X+XX++X++X+XXX+++@X!++XXXXX+X __94__ >CONSENSUS__94__ Length: 3764 [gain: 40] ATGGCGTCGAGGTGACGAAGGCGTGTCAACTCCGGGAGTTGACGCTGCAAACAGTGCGGACGGTTGCAAACGTACCGCACTGACGCAATTTGCATGCTGTCGTGCAGCCGGGCTGCACGACGAAGCGCCATGCGATCAAGCCGGGCTTGATATCGCGCGCCCGCAGACAGGGTCTGCCGGCGAAGGGACACATTACCGTGCAGCCGGGCTGCACGAAGGAAAATGCGGTCAAGCCGGGCTTGATACCGCGCGCCCGCGGACAGGGTCCGCCGGCGAACGACTGTCCACGGCCGGGCCTGGACCAGAAGAACAACTGTGCGGAGCCGGGCTCCGCACAACAAGAAGACGGCGCAAGCGGAAAACGCTGCGCAAGTCTCGGTCCGGGACCGAGACGCAACAAGAGCAGTCTGCTGGGCAGACTGCGGCGGTGACGCCGAATGTCAAGACGCTAAGCGTCTTGACGCGCACCGATACTGGATTCCAGTATCGTGACATGGAACTCGCTAGTCCTCCGACGACGGCGTCGGAGTTGACTTCGCTTCCAGCCATGAGCTGGAAGCGCTTCACGCGCGACTTGCACGATGGACGCATCGAGCAAGTCTGCGTTCTTTCGGACAGCGAAAGAACGGAGAGCGAGAGCGAAGAGCTGAGGCAGCTCTTCATGGGAAGTACCACTGAGAGTGAAGACACTCTCAGTGCGAAGACGAAGCGAGAGCGCTTCGAGGAACAAGGTTGGGACTCGCTGAAGTCGAGTCCCTATTACGAATTGTTGAGGGAGTACAAAGACGTACTCCCGGAAGAGATTCCTGCGGAGCTTCCGCAGGATAAGGGCATTCAGCACGAGATTGATCTCGTGCCGGGCACGAAGTACTGTGTCACGCGGCAGTGGCCACTGCCGCGAGAGCAAGTGAAAGCGATCGACGACTTCTTTGAAAGTCGTCGTAAAGCAGGACAAGTGCGGGAATCAAAGTCCCCGCACAGTGCTCCGACGTTCTGTGTCAAGAAGCCACAGGGCGGATGGCGCATCGTTCATGCCTACAACAAGCTGAACGATGCGACGGTACCGGCGCAGACGCCGATACCGCGAAAAGATGTTATCATCGATTCGATGGCCGGGAGCACCGTTTACAGTGCTCTCGACTTGCGAGATGGATTTTATCAAATCCTAATGCGTGAGAGCGATATCCCTCTCACGGCAGTGAGCACGCCAAGCGGCATGCTCTGGGAATGGCTAGTAATGCCACAGGGGCTTAAGAACGCCCCTGCGACTTTCAACAGGTGCGTGACGCACTTGTTGCGCTCGGTGCGCGACTTCGCACCGAGCTACTTCGATGATGTATTCATCCACAGCCGGGCTGTGGACGGGAAGACCGACGTAGAGATGCACAGGGTGCATCTCCGGAAGCTACTTGAGCTTATGCGAAAGCATAAGCTCTACGCGAACCTGAAGAAGTGTATCTTCGGGGCGAGCGAGATACCCGTCCTCGGGTGTCTCGTAGGGAAGAATGGTGTTCGCCCTGACCCGGAAAAGGTCAGAGTGATCAATGAATGGCCAACGCCTTCAAGTGTCAAGGAACTGAGGCAGTTCCTTGGCTTGGCCACGTACTTGTGCAAGTACGTGGAGGATTATGCGGGCAAGATCCGCCCGCTGTCACAGCTTCTTAAGAAAGAAGCTGTGTGGAATTGGACACCCGATTGCCAAAAGGCATTCGATGCAGTCAAGCGGGGCTTGACTGAGGCGCCGATCTTGGCAGTGGCTGACCAAGATCGCCCATTTCACGTAGTGTGTGACGCATCCGATTTCGCGATCGGATGCGCGTTGATGCAGCACGATCACGAGGGCCGTGATCGTGTCGTCTACTACCAATCGCGTCAGCTGAAGCCAGCTGAGCGCAACTATCCGGTGCATGACAAGGAACTCCTTGCCATGAAGTATGCACTCGCAAAGTTCCGAGTGTACTTGCTTGGGAGTAGACCATTTGTGGTCTACACCGACCATGCTTCACTGCGCACCGCAGTGAAGTCGCCACACATTTCACAAAGAATGGCGAGATGGCTCTCATTCTTTGCGGAGTATAACTTCCGGGTCGAATACAAACCCGGAAGATTGAACGTGGTGGCCGACGCGTTATCACGTCGGCCGGACTATGCAGAAGCTGTTGACGTCAATGCCATTGACGCCATGCGATCGAGCAAACCCACATCATCTCTGTTGGATGATGTGAAGGCCGCGTACGCGCACGACGCGGACGCGAAGCTCTTGCTGGCCTATGGCACAGCGCCTTCTGACAAGTCCCGTCAGAAGCTGCCCAAGCACCTTCGAGCGCGTGCACACCGCTTTCGTGTGCACGACGGACTACTGCTTTACAATGCAGTCGACGACAACGCGGATCGCGTTGTCGTGCCAAATGACCATGACCTGCGACTCAGGATCATGTACGAGTATCATGATGCCCCGACTGCGGGACATCTCGGACGTGAGAAGACTTACGTCCTTCTCACGCGCGACTTCTACTGGCACCACCAGTATAAGTGGGTGCGCAAGTACATCCGTGCTTGCGAGGTATGCCAACGCGTAAAGCCTGCGCCATTCGCGCAGGCTCCACTGCAATCACTACCGACTCCGTCGGAGTGTTGGAAGTCCATGTCTTTGGACTTCATCTTTGGTCTTCCCCCGGACAGCGGAGGGAATACCGGTGTTGTGGTCTTCGTCGACCGCTTCAGCAAGATGGTACATCTTGCTGCGGTGCCGGCAGAAGTGACCGCGAAGCAGACGGCCCGTCTGTTCGTCGACATGGTGTTCAAACACCATGGCATGCCGACCGACATCGTGTCGGACAGAGACCCGCGCTTCACAGCGCACCTGTGGCAAGAAGTGTTTACACTTCTTGGGAGCCAGCTTTCCATGTCGACTGCGGATCATCCGCAGACGGACGGTCAAACCGAGCGCGTGAATCGCGTGCTCGTCGATATGTTGAAGAGCTACGCTCACTCGTTCCAATACTGGAGCGAGTGCTTATCGATGGCAGAGTTTGCCATCAATAACTCAGTGCATGCCTCGACCGGGCATACACCGTTCTACGTGAATGCCATGCGGCATCCACGTCTACCGAGTTTACTCGGAGTGATGGCTCCCACTTTAAGTGGGGGAGGATCTACGACTGCAATACAGCAGCCGCAGAAAACCGCTGACACTTGCACAGTGTCAGCTGCAACAATGGACAAACCACATGAGTCTGCGCAGGGCGCAGACTCCCCCAACAACAAGGCCAACGACCACGGGTCTGCGCAGGGCGCAGACACCGCAAAGAACCACGCAGAGGCCGGGCCTCTAGCGGAGAGCGAGCTGAATGACTTCAGCTCGGATGCAATCAGTTTCATCACCAAAAGACAAGCCGTGATTCGGTTTGTCCAAGACACAATAGCAGCTTCTGTTGATCAACAGAAGCTGAACGCAGACAATGCGGGCAGAGGCAACACAAATGAATTTAAAGTTGGTTCATTAGTTTTGTTAGCTACACAAAACCTGCCTAGACATGCAGTTTCGGATTTCGGAGCAAGCAAGCTTGCTCCGCGCTTCATCGGGCCGTTCACTGTGTTGGCACGGCACGGCAACGCATACACGCTAGACATACCGTCTAGCATGCGCCTCCATCCGACCTTTTACGTCGGACGGCTGAAGCCATACCTGCAGCACGAGCCATCTAGCTCGGCTGACCCGAAGCCTCGGCAGGAGCCGAGGCAGAAGCGGAGGACTTGGCCTC OLD KEY: TGCAGCACGAGCCATCTAGCTCGGCTGACCCGAAG NEW KEY: GCAGGAGCCGAGGCAGAAGCGGAGGACTTGGCCTC ........ _A_ 00X00X0000X000X0XX0000X00X0000000000000X00X00X60000000000900000000800000000 __95__ ........ _T_ 000000000000000000000000000XX0000X00000000000000090X00900000000000000000900 __95__ ........ _G_ X00XX0X00X0XX00X00X0XX0XX0000XX0000XX0X00X0X00300000000000X09090991090900XX __95__ ........ _C_ 0X00000XX0000X00000X000000X0000XX0X00X00X000X00XX0X0XX0XX10X0X09110X0X0X000 __95__ ........ _N_ 000000000000000000000000000000000000000000000000000000000000000000000000000 __95__ ........ ALL wwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwvvvuuuuuttttssssrrrrqqqpppoooooomkjjihgd __95__ ******** *** ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^**************************************** __95__ ######## CNS GCAGGAGCCGAGGCAGAAGCGGAGGACTTGGCCTCGGCGACGAGCAaCCtCTCCtCCaGCgCgcggaCgCgCtGG __95__ ######## QLT XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX!XX+XXXX+XX+XX+X+++++X+X+X+XX __95__ >CONSENSUS__95__ Length: 3804 [gain: 40] ATGGCGTCGAGGTGACGAAGGCGTGTCAACTCCGGGAGTTGACGCTGCAAACAGTGCGGACGGTTGCAAACGTACCGCACTGACGCAATTTGCATGCTGTCGTGCAGCCGGGCTGCACGACGAAGCGCCATGCGATCAAGCCGGGCTTGATATCGCGCGCCCGCAGACAGGGTCTGCCGGCGAAGGGACACATTACCGTGCAGCCGGGCTGCACGAAGGAAAATGCGGTCAAGCCGGGCTTGATACCGCGCGCCCGCGGACAGGGTCCGCCGGCGAACGACTGTCCACGGCCGGGCCTGGACCAGAAGAACAACTGTGCGGAGCCGGGCTCCGCACAACAAGAAGACGGCGCAAGCGGAAAACGCTGCGCAAGTCTCGGTCCGGGACCGAGACGCAACAAGAGCAGTCTGCTGGGCAGACTGCGGCGGTGACGCCGAATGTCAAGACGCTAAGCGTCTTGACGCGCACCGATACTGGATTCCAGTATCGTGACATGGAACTCGCTAGTCCTCCGACGACGGCGTCGGAGTTGACTTCGCTTCCAGCCATGAGCTGGAAGCGCTTCACGCGCGACTTGCACGATGGACGCATCGAGCAAGTCTGCGTTCTTTCGGACAGCGAAAGAACGGAGAGCGAGAGCGAAGAGCTGAGGCAGCTCTTCATGGGAAGTACCACTGAGAGTGAAGACACTCTCAGTGCGAAGACGAAGCGAGAGCGCTTCGAGGAACAAGGTTGGGACTCGCTGAAGTCGAGTCCCTATTACGAATTGTTGAGGGAGTACAAAGACGTACTCCCGGAAGAGATTCCTGCGGAGCTTCCGCAGGATAAGGGCATTCAGCACGAGATTGATCTCGTGCCGGGCACGAAGTACTGTGTCACGCGGCAGTGGCCACTGCCGCGAGAGCAAGTGAAAGCGATCGACGACTTCTTTGAAAGTCGTCGTAAAGCAGGACAAGTGCGGGAATCAAAGTCCCCGCACAGTGCTCCGACGTTCTGTGTCAAGAAGCCACAGGGCGGATGGCGCATCGTTCATGCCTACAACAAGCTGAACGATGCGACGGTACCGGCGCAGACGCCGATACCGCGAAAAGATGTTATCATCGATTCGATGGCCGGGAGCACCGTTTACAGTGCTCTCGACTTGCGAGATGGATTTTATCAAATCCTAATGCGTGAGAGCGATATCCCTCTCACGGCAGTGAGCACGCCAAGCGGCATGCTCTGGGAATGGCTAGTAATGCCACAGGGGCTTAAGAACGCCCCTGCGACTTTCAACAGGTGCGTGACGCACTTGTTGCGCTCGGTGCGCGACTTCGCACCGAGCTACTTCGATGATGTATTCATCCACAGCCGGGCTGTGGACGGGAAGACCGACGTAGAGATGCACAGGGTGCATCTCCGGAAGCTACTTGAGCTTATGCGAAAGCATAAGCTCTACGCGAACCTGAAGAAGTGTATCTTCGGGGCGAGCGAGATACCCGTCCTCGGGTGTCTCGTAGGGAAGAATGGTGTTCGCCCTGACCCGGAAAAGGTCAGAGTGATCAATGAATGGCCAACGCCTTCAAGTGTCAAGGAACTGAGGCAGTTCCTTGGCTTGGCCACGTACTTGTGCAAGTACGTGGAGGATTATGCGGGCAAGATCCGCCCGCTGTCACAGCTTCTTAAGAAAGAAGCTGTGTGGAATTGGACACCCGATTGCCAAAAGGCATTCGATGCAGTCAAGCGGGGCTTGACTGAGGCGCCGATCTTGGCAGTGGCTGACCAAGATCGCCCATTTCACGTAGTGTGTGACGCATCCGATTTCGCGATCGGATGCGCGTTGATGCAGCACGATCACGAGGGCCGTGATCGTGTCGTCTACTACCAATCGCGTCAGCTGAAGCCAGCTGAGCGCAACTATCCGGTGCATGACAAGGAACTCCTTGCCATGAAGTATGCACTCGCAAAGTTCCGAGTGTACTTGCTTGGGAGTAGACCATTTGTGGTCTACACCGACCATGCTTCACTGCGCACCGCAGTGAAGTCGCCACACATTTCACAAAGAATGGCGAGATGGCTCTCATTCTTTGCGGAGTATAACTTCCGGGTCGAATACAAACCCGGAAGATTGAACGTGGTGGCCGACGCGTTATCACGTCGGCCGGACTATGCAGAAGCTGTTGACGTCAATGCCATTGACGCCATGCGATCGAGCAAACCCACATCATCTCTGTTGGATGATGTGAAGGCCGCGTACGCGCACGACGCGGACGCGAAGCTCTTGCTGGCCTATGGCACAGCGCCTTCTGACAAGTCCCGTCAGAAGCTGCCCAAGCACCTTCGAGCGCGTGCACACCGCTTTCGTGTGCACGACGGACTACTGCTTTACAATGCAGTCGACGACAACGCGGATCGCGTTGTCGTGCCAAATGACCATGACCTGCGACTCAGGATCATGTACGAGTATCATGATGCCCCGACTGCGGGACATCTCGGACGTGAGAAGACTTACGTCCTTCTCACGCGCGACTTCTACTGGCACCACCAGTATAAGTGGGTGCGCAAGTACATCCGTGCTTGCGAGGTATGCCAACGCGTAAAGCCTGCGCCATTCGCGCAGGCTCCACTGCAATCACTACCGACTCCGTCGGAGTGTTGGAAGTCCATGTCTTTGGACTTCATCTTTGGTCTTCCCCCGGACAGCGGAGGGAATACCGGTGTTGTGGTCTTCGTCGACCGCTTCAGCAAGATGGTACATCTTGCTGCGGTGCCGGCAGAAGTGACCGCGAAGCAGACGGCCCGTCTGTTCGTCGACATGGTGTTCAAACACCATGGCATGCCGACCGACATCGTGTCGGACAGAGACCCGCGCTTCACAGCGCACCTGTGGCAAGAAGTGTTTACACTTCTTGGGAGCCAGCTTTCCATGTCGACTGCGGATCATCCGCAGACGGACGGTCAAACCGAGCGCGTGAATCGCGTGCTCGTCGATATGTTGAAGAGCTACGCTCACTCGTTCCAATACTGGAGCGAGTGCTTATCGATGGCAGAGTTTGCCATCAATAACTCAGTGCATGCCTCGACCGGGCATACACCGTTCTACGTGAATGCCATGCGGCATCCACGTCTACCGAGTTTACTCGGAGTGATGGCTCCCACTTTAAGTGGGGGAGGATCTACGACTGCAATACAGCAGCCGCAGAAAACCGCTGACACTTGCACAGTGTCAGCTGCAACAATGGACAAACCACATGAGTCTGCGCAGGGCGCAGACTCCCCCAACAACAAGGCCAACGACCACGGGTCTGCGCAGGGCGCAGACACCGCAAAGAACCACGCAGAGGCCGGGCCTCTAGCGGAGAGCGAGCTGAATGACTTCAGCTCGGATGCAATCAGTTTCATCACCAAAAGACAAGCCGTGATTCGGTTTGTCCAAGACACAATAGCAGCTTCTGTTGATCAACAGAAGCTGAACGCAGACAATGCGGGCAGAGGCAACACAAATGAATTTAAAGTTGGTTCATTAGTTTTGTTAGCTACACAAAACCTGCCTAGACATGCAGTTTCGGATTTCGGAGCAAGCAAGCTTGCTCCGCGCTTCATCGGGCCGTTCACTGTGTTGGCACGGCACGGCAACGCATACACGCTAGACATACCGTCTAGCATGCGCCTCCATCCGACCTTTTACGTCGGACGGCTGAAGCCATACCTGCAGCACGAGCCATCTAGCTCGGCTGACCCGAAGCCTCGGCAGGAGCCGAGGCAGAAGCGGAGGACTTGGCCTCGGCGACGAGCAACCTCTCCTCCAGCGCGCGGACGCGCTGG OLD KEY: GCAGGAGCCGAGGCAGAAGCGGAGGACTTGGCCTC NEW KEY: CGAGCAACCTCTCCTCCAGCGCGCGGACGCGCTGG ........ _A_ 00X00XX0000000000X00000000X00000000X00XX0000000X00000000000X20000X00000X090 __96__ ........ _T_ 000000000X0X00X00000000000000000X00000000000XX00X0X000X0000000X00000X000X0X __96__ ........ _G_ 0X0X00000000000000X0X0X0XX00X0X00XX0X00000000000000XXX0000008000X0000XX0010 __96__ ........ _C_ X000X00XX0X0XX0XX00X0X0X000X0X0X00000X00XXXX00X00X00000XXXX00X0X00XX0000000 __96__ ........ _N_ 000000000000000000000000000000000000000000000000000000000000000000000000000 __96__ ........ ALL uuuuuuuuuuuuuuuuuuuuuuuuuuuuuuuuuuuuttttssssssrrrrqqqqpppppooooonmmllkjhhfc __96__ ******** *** ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^**************************************** __96__ ######## CNS CGAGCAACCTCTCCTCCAGCGCGCGGACGCGCTGGAGCAACCCCTTCATCTGGGTCCCCAgCTCGACCTGGATaT __96__ ######## QLT XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX+XXXXXXXXXXXX+X __96__ >CONSENSUS__96__ Length: 3844 [gain: 40] ATGGCGTCGAGGTGACGAAGGCGTGTCAACTCCGGGAGTTGACGCTGCAAACAGTGCGGACGGTTGCAAACGTACCGCACTGACGCAATTTGCATGCTGTCGTGCAGCCGGGCTGCACGACGAAGCGCCATGCGATCAAGCCGGGCTTGATATCGCGCGCCCGCAGACAGGGTCTGCCGGCGAAGGGACACATTACCGTGCAGCCGGGCTGCACGAAGGAAAATGCGGTCAAGCCGGGCTTGATACCGCGCGCCCGCGGACAGGGTCCGCCGGCGAACGACTGTCCACGGCCGGGCCTGGACCAGAAGAACAACTGTGCGGAGCCGGGCTCCGCACAACAAGAAGACGGCGCAAGCGGAAAACGCTGCGCAAGTCTCGGTCCGGGACCGAGACGCAACAAGAGCAGTCTGCTGGGCAGACTGCGGCGGTGACGCCGAATGTCAAGACGCTAAGCGTCTTGACGCGCACCGATACTGGATTCCAGTATCGTGACATGGAACTCGCTAGTCCTCCGACGACGGCGTCGGAGTTGACTTCGCTTCCAGCCATGAGCTGGAAGCGCTTCACGCGCGACTTGCACGATGGACGCATCGAGCAAGTCTGCGTTCTTTCGGACAGCGAAAGAACGGAGAGCGAGAGCGAAGAGCTGAGGCAGCTCTTCATGGGAAGTACCACTGAGAGTGAAGACACTCTCAGTGCGAAGACGAAGCGAGAGCGCTTCGAGGAACAAGGTTGGGACTCGCTGAAGTCGAGTCCCTATTACGAATTGTTGAGGGAGTACAAAGACGTACTCCCGGAAGAGATTCCTGCGGAGCTTCCGCAGGATAAGGGCATTCAGCACGAGATTGATCTCGTGCCGGGCACGAAGTACTGTGTCACGCGGCAGTGGCCACTGCCGCGAGAGCAAGTGAAAGCGATCGACGACTTCTTTGAAAGTCGTCGTAAAGCAGGACAAGTGCGGGAATCAAAGTCCCCGCACAGTGCTCCGACGTTCTGTGTCAAGAAGCCACAGGGCGGATGGCGCATCGTTCATGCCTACAACAAGCTGAACGATGCGACGGTACCGGCGCAGACGCCGATACCGCGAAAAGATGTTATCATCGATTCGATGGCCGGGAGCACCGTTTACAGTGCTCTCGACTTGCGAGATGGATTTTATCAAATCCTAATGCGTGAGAGCGATATCCCTCTCACGGCAGTGAGCACGCCAAGCGGCATGCTCTGGGAATGGCTAGTAATGCCACAGGGGCTTAAGAACGCCCCTGCGACTTTCAACAGGTGCGTGACGCACTTGTTGCGCTCGGTGCGCGACTTCGCACCGAGCTACTTCGATGATGTATTCATCCACAGCCGGGCTGTGGACGGGAAGACCGACGTAGAGATGCACAGGGTGCATCTCCGGAAGCTACTTGAGCTTATGCGAAAGCATAAGCTCTACGCGAACCTGAAGAAGTGTATCTTCGGGGCGAGCGAGATACCCGTCCTCGGGTGTCTCGTAGGGAAGAATGGTGTTCGCCCTGACCCGGAAAAGGTCAGAGTGATCAATGAATGGCCAACGCCTTCAAGTGTCAAGGAACTGAGGCAGTTCCTTGGCTTGGCCACGTACTTGTGCAAGTACGTGGAGGATTATGCGGGCAAGATCCGCCCGCTGTCACAGCTTCTTAAGAAAGAAGCTGTGTGGAATTGGACACCCGATTGCCAAAAGGCATTCGATGCAGTCAAGCGGGGCTTGACTGAGGCGCCGATCTTGGCAGTGGCTGACCAAGATCGCCCATTTCACGTAGTGTGTGACGCATCCGATTTCGCGATCGGATGCGCGTTGATGCAGCACGATCACGAGGGCCGTGATCGTGTCGTCTACTACCAATCGCGTCAGCTGAAGCCAGCTGAGCGCAACTATCCGGTGCATGACAAGGAACTCCTTGCCATGAAGTATGCACTCGCAAAGTTCCGAGTGTACTTGCTTGGGAGTAGACCATTTGTGGTCTACACCGACCATGCTTCACTGCGCACCGCAGTGAAGTCGCCACACATTTCACAAAGAATGGCGAGATGGCTCTCATTCTTTGCGGAGTATAACTTCCGGGTCGAATACAAACCCGGAAGATTGAACGTGGTGGCCGACGCGTTATCACGTCGGCCGGACTATGCAGAAGCTGTTGACGTCAATGCCATTGACGCCATGCGATCGAGCAAACCCACATCATCTCTGTTGGATGATGTGAAGGCCGCGTACGCGCACGACGCGGACGCGAAGCTCTTGCTGGCCTATGGCACAGCGCCTTCTGACAAGTCCCGTCAGAAGCTGCCCAAGCACCTTCGAGCGCGTGCACACCGCTTTCGTGTGCACGACGGACTACTGCTTTACAATGCAGTCGACGACAACGCGGATCGCGTTGTCGTGCCAAATGACCATGACCTGCGACTCAGGATCATGTACGAGTATCATGATGCCCCGACTGCGGGACATCTCGGACGTGAGAAGACTTACGTCCTTCTCACGCGCGACTTCTACTGGCACCACCAGTATAAGTGGGTGCGCAAGTACATCCGTGCTTGCGAGGTATGCCAACGCGTAAAGCCTGCGCCATTCGCGCAGGCTCCACTGCAATCACTACCGACTCCGTCGGAGTGTTGGAAGTCCATGTCTTTGGACTTCATCTTTGGTCTTCCCCCGGACAGCGGAGGGAATACCGGTGTTGTGGTCTTCGTCGACCGCTTCAGCAAGATGGTACATCTTGCTGCGGTGCCGGCAGAAGTGACCGCGAAGCAGACGGCCCGTCTGTTCGTCGACATGGTGTTCAAACACCATGGCATGCCGACCGACATCGTGTCGGACAGAGACCCGCGCTTCACAGCGCACCTGTGGCAAGAAGTGTTTACACTTCTTGGGAGCCAGCTTTCCATGTCGACTGCGGATCATCCGCAGACGGACGGTCAAACCGAGCGCGTGAATCGCGTGCTCGTCGATATGTTGAAGAGCTACGCTCACTCGTTCCAATACTGGAGCGAGTGCTTATCGATGGCAGAGTTTGCCATCAATAACTCAGTGCATGCCTCGACCGGGCATACACCGTTCTACGTGAATGCCATGCGGCATCCACGTCTACCGAGTTTACTCGGAGTGATGGCTCCCACTTTAAGTGGGGGAGGATCTACGACTGCAATACAGCAGCCGCAGAAAACCGCTGACACTTGCACAGTGTCAGCTGCAACAATGGACAAACCACATGAGTCTGCGCAGGGCGCAGACTCCCCCAACAACAAGGCCAACGACCACGGGTCTGCGCAGGGCGCAGACACCGCAAAGAACCACGCAGAGGCCGGGCCTCTAGCGGAGAGCGAGCTGAATGACTTCAGCTCGGATGCAATCAGTTTCATCACCAAAAGACAAGCCGTGATTCGGTTTGTCCAAGACACAATAGCAGCTTCTGTTGATCAACAGAAGCTGAACGCAGACAATGCGGGCAGAGGCAACACAAATGAATTTAAAGTTGGTTCATTAGTTTTGTTAGCTACACAAAACCTGCCTAGACATGCAGTTTCGGATTTCGGAGCAAGCAAGCTTGCTCCGCGCTTCATCGGGCCGTTCACTGTGTTGGCACGGCACGGCAACGCATACACGCTAGACATACCGTCTAGCATGCGCCTCCATCCGACCTTTTACGTCGGACGGCTGAAGCCATACCTGCAGCACGAGCCATCTAGCTCGGCTGACCCGAAGCCTCGGCAGGAGCCGAGGCAGAAGCGGAGGACTTGGCCTCGGCGACGAGCAACCTCTCCTCCAGCGCGCGGACGCGCTGGAGCAACCCCTTCATCTGGGTCCCCAGCTCGACCTGGATAT OLD KEY: CGAGCAACCTCTCCTCCAGCGCGCGGACGCGCTGG NEW KEY: CCCCTTCATCTGGGTCCCCAGCTCGACCTGGATAT ........ _A_ 0000000X00000000000X00000X00000X0X0000X00000000000X0X00000000X0000000000000 __97__ ........ _T_ 0000XX00X0X000X0000000X00000X000X0XX00000000X0X000000000000000089000009X090 __97__ ........ _G_ 00000000000XXX000000X000X0000XX000000X0XX0XX000X0X0X000X00X090000X9X000000X __97__ ........ _C_ XXXX00X00X00000XXXX00X0X00XX00000000X0000X000X00X0000XX0XX0X00X11000XX00X10 __97__ ........ _N_ 000000000000000000000000000000000000000000000000000000000000000000000000000 __97__ ........ ALL vvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvuuutttssssrrrqqqppppppoooooooonlkjggeb __97__ ******** *** ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^**************************************** __97__ ######## CNS CCCCTTCATCTGGGTCCCCAGCTCGACCTGGATATTCGAGGCGGTCTGCGAGACCGCCGCgACttGgGCCtTCtG __97__ ######## QLT XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX+XX++X+XXX+XX+X __97__ >CONSENSUS__97__ Length: 3884 [gain: 40] ATGGCGTCGAGGTGACGAAGGCGTGTCAACTCCGGGAGTTGACGCTGCAAACAGTGCGGACGGTTGCAAACGTACCGCACTGACGCAATTTGCATGCTGTCGTGCAGCCGGGCTGCACGACGAAGCGCCATGCGATCAAGCCGGGCTTGATATCGCGCGCCCGCAGACAGGGTCTGCCGGCGAAGGGACACATTACCGTGCAGCCGGGCTGCACGAAGGAAAATGCGGTCAAGCCGGGCTTGATACCGCGCGCCCGCGGACAGGGTCCGCCGGCGAACGACTGTCCACGGCCGGGCCTGGACCAGAAGAACAACTGTGCGGAGCCGGGCTCCGCACAACAAGAAGACGGCGCAAGCGGAAAACGCTGCGCAAGTCTCGGTCCGGGACCGAGACGCAACAAGAGCAGTCTGCTGGGCAGACTGCGGCGGTGACGCCGAATGTCAAGACGCTAAGCGTCTTGACGCGCACCGATACTGGATTCCAGTATCGTGACATGGAACTCGCTAGTCCTCCGACGACGGCGTCGGAGTTGACTTCGCTTCCAGCCATGAGCTGGAAGCGCTTCACGCGCGACTTGCACGATGGACGCATCGAGCAAGTCTGCGTTCTTTCGGACAGCGAAAGAACGGAGAGCGAGAGCGAAGAGCTGAGGCAGCTCTTCATGGGAAGTACCACTGAGAGTGAAGACACTCTCAGTGCGAAGACGAAGCGAGAGCGCTTCGAGGAACAAGGTTGGGACTCGCTGAAGTCGAGTCCCTATTACGAATTGTTGAGGGAGTACAAAGACGTACTCCCGGAAGAGATTCCTGCGGAGCTTCCGCAGGATAAGGGCATTCAGCACGAGATTGATCTCGTGCCGGGCACGAAGTACTGTGTCACGCGGCAGTGGCCACTGCCGCGAGAGCAAGTGAAAGCGATCGACGACTTCTTTGAAAGTCGTCGTAAAGCAGGACAAGTGCGGGAATCAAAGTCCCCGCACAGTGCTCCGACGTTCTGTGTCAAGAAGCCACAGGGCGGATGGCGCATCGTTCATGCCTACAACAAGCTGAACGATGCGACGGTACCGGCGCAGACGCCGATACCGCGAAAAGATGTTATCATCGATTCGATGGCCGGGAGCACCGTTTACAGTGCTCTCGACTTGCGAGATGGATTTTATCAAATCCTAATGCGTGAGAGCGATATCCCTCTCACGGCAGTGAGCACGCCAAGCGGCATGCTCTGGGAATGGCTAGTAATGCCACAGGGGCTTAAGAACGCCCCTGCGACTTTCAACAGGTGCGTGACGCACTTGTTGCGCTCGGTGCGCGACTTCGCACCGAGCTACTTCGATGATGTATTCATCCACAGCCGGGCTGTGGACGGGAAGACCGACGTAGAGATGCACAGGGTGCATCTCCGGAAGCTACTTGAGCTTATGCGAAAGCATAAGCTCTACGCGAACCTGAAGAAGTGTATCTTCGGGGCGAGCGAGATACCCGTCCTCGGGTGTCTCGTAGGGAAGAATGGTGTTCGCCCTGACCCGGAAAAGGTCAGAGTGATCAATGAATGGCCAACGCCTTCAAGTGTCAAGGAACTGAGGCAGTTCCTTGGCTTGGCCACGTACTTGTGCAAGTACGTGGAGGATTATGCGGGCAAGATCCGCCCGCTGTCACAGCTTCTTAAGAAAGAAGCTGTGTGGAATTGGACACCCGATTGCCAAAAGGCATTCGATGCAGTCAAGCGGGGCTTGACTGAGGCGCCGATCTTGGCAGTGGCTGACCAAGATCGCCCATTTCACGTAGTGTGTGACGCATCCGATTTCGCGATCGGATGCGCGTTGATGCAGCACGATCACGAGGGCCGTGATCGTGTCGTCTACTACCAATCGCGTCAGCTGAAGCCAGCTGAGCGCAACTATCCGGTGCATGACAAGGAACTCCTTGCCATGAAGTATGCACTCGCAAAGTTCCGAGTGTACTTGCTTGGGAGTAGACCATTTGTGGTCTACACCGACCATGCTTCACTGCGCACCGCAGTGAAGTCGCCACACATTTCACAAAGAATGGCGAGATGGCTCTCATTCTTTGCGGAGTATAACTTCCGGGTCGAATACAAACCCGGAAGATTGAACGTGGTGGCCGACGCGTTATCACGTCGGCCGGACTATGCAGAAGCTGTTGACGTCAATGCCATTGACGCCATGCGATCGAGCAAACCCACATCATCTCTGTTGGATGATGTGAAGGCCGCGTACGCGCACGACGCGGACGCGAAGCTCTTGCTGGCCTATGGCACAGCGCCTTCTGACAAGTCCCGTCAGAAGCTGCCCAAGCACCTTCGAGCGCGTGCACACCGCTTTCGTGTGCACGACGGACTACTGCTTTACAATGCAGTCGACGACAACGCGGATCGCGTTGTCGTGCCAAATGACCATGACCTGCGACTCAGGATCATGTACGAGTATCATGATGCCCCGACTGCGGGACATCTCGGACGTGAGAAGACTTACGTCCTTCTCACGCGCGACTTCTACTGGCACCACCAGTATAAGTGGGTGCGCAAGTACATCCGTGCTTGCGAGGTATGCCAACGCGTAAAGCCTGCGCCATTCGCGCAGGCTCCACTGCAATCACTACCGACTCCGTCGGAGTGTTGGAAGTCCATGTCTTTGGACTTCATCTTTGGTCTTCCCCCGGACAGCGGAGGGAATACCGGTGTTGTGGTCTTCGTCGACCGCTTCAGCAAGATGGTACATCTTGCTGCGGTGCCGGCAGAAGTGACCGCGAAGCAGACGGCCCGTCTGTTCGTCGACATGGTGTTCAAACACCATGGCATGCCGACCGACATCGTGTCGGACAGAGACCCGCGCTTCACAGCGCACCTGTGGCAAGAAGTGTTTACACTTCTTGGGAGCCAGCTTTCCATGTCGACTGCGGATCATCCGCAGACGGACGGTCAAACCGAGCGCGTGAATCGCGTGCTCGTCGATATGTTGAAGAGCTACGCTCACTCGTTCCAATACTGGAGCGAGTGCTTATCGATGGCAGAGTTTGCCATCAATAACTCAGTGCATGCCTCGACCGGGCATACACCGTTCTACGTGAATGCCATGCGGCATCCACGTCTACCGAGTTTACTCGGAGTGATGGCTCCCACTTTAAGTGGGGGAGGATCTACGACTGCAATACAGCAGCCGCAGAAAACCGCTGACACTTGCACAGTGTCAGCTGCAACAATGGACAAACCACATGAGTCTGCGCAGGGCGCAGACTCCCCCAACAACAAGGCCAACGACCACGGGTCTGCGCAGGGCGCAGACACCGCAAAGAACCACGCAGAGGCCGGGCCTCTAGCGGAGAGCGAGCTGAATGACTTCAGCTCGGATGCAATCAGTTTCATCACCAAAAGACAAGCCGTGATTCGGTTTGTCCAAGACACAATAGCAGCTTCTGTTGATCAACAGAAGCTGAACGCAGACAATGCGGGCAGAGGCAACACAAATGAATTTAAAGTTGGTTCATTAGTTTTGTTAGCTACACAAAACCTGCCTAGACATGCAGTTTCGGATTTCGGAGCAAGCAAGCTTGCTCCGCGCTTCATCGGGCCGTTCACTGTGTTGGCACGGCACGGCAACGCATACACGCTAGACATACCGTCTAGCATGCGCCTCCATCCGACCTTTTACGTCGGACGGCTGAAGCCATACCTGCAGCACGAGCCATCTAGCTCGGCTGACCCGAAGCCTCGGCAGGAGCCGAGGCAGAAGCGGAGGACTTGGCCTCGGCGACGAGCAACCTCTCCTCCAGCGCGCGGACGCGCTGGAGCAACCCCTTCATCTGGGTCCCCAGCTCGACCTGGATATTCGAGGCGGTCTGCGAGACCGCCGCGACTTGGGCCTTCTG OLD KEY: CCCCTTCATCTGGGTCCCCAGCTCGACCTGGATAT NEW KEY: GCGGTCTGCGAGACCGCCGCGACTTGGGCCTTCTG ........ _A_ 0000000000X0X00000000X00000000000000000000X00000000000X000000009X000X000000 __98__ ........ _T_ 0000X0X0000000000000000XX00000XX0X00XX0000000X00X06XX2000000000000900000001 __98__ ........ _G_ X0XX000X0X0X000X00X0X0000XXX000000XX000X000X00000X00000XXX0XX0X000000X0X000 __98__ ........ _C_ 0X000X00X0000XX0XX0X00X00000XX00X00000X0XX00X0XX0030080000X00X000X0X00X0XX9 __98__ ........ _N_ 000000000000000000000000000000000000000000000000000000000000000000000000000 __98__ ........ ALL tttttttttttttttttttttttttttttttttttttssssssrrrrrrrqqqqqqqppppppoooomlkkjida __98__ ******** *** ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^**************************************** __98__ ######## CNS GCGGTCTGCGAGACCGCCGCGACTTGGGCCTTCTGGTTCGCCAGCTCCTGtTTcAGGGCGGCGaACtCAGCGCCc __98__ ######## QLT XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX!XX+XXXXXXXXX+XX+XXXXXXX+ __98__ >CONSENSUS__98__ Length: 3924 [gain: 40] ATGGCGTCGAGGTGACGAAGGCGTGTCAACTCCGGGAGTTGACGCTGCAAACAGTGCGGACGGTTGCAAACGTACCGCACTGACGCAATTTGCATGCTGTCGTGCAGCCGGGCTGCACGACGAAGCGCCATGCGATCAAGCCGGGCTTGATATCGCGCGCCCGCAGACAGGGTCTGCCGGCGAAGGGACACATTACCGTGCAGCCGGGCTGCACGAAGGAAAATGCGGTCAAGCCGGGCTTGATACCGCGCGCCCGCGGACAGGGTCCGCCGGCGAACGACTGTCCACGGCCGGGCCTGGACCAGAAGAACAACTGTGCGGAGCCGGGCTCCGCACAACAAGAAGACGGCGCAAGCGGAAAACGCTGCGCAAGTCTCGGTCCGGGACCGAGACGCAACAAGAGCAGTCTGCTGGGCAGACTGCGGCGGTGACGCCGAATGTCAAGACGCTAAGCGTCTTGACGCGCACCGATACTGGATTCCAGTATCGTGACATGGAACTCGCTAGTCCTCCGACGACGGCGTCGGAGTTGACTTCGCTTCCAGCCATGAGCTGGAAGCGCTTCACGCGCGACTTGCACGATGGACGCATCGAGCAAGTCTGCGTTCTTTCGGACAGCGAAAGAACGGAGAGCGAGAGCGAAGAGCTGAGGCAGCTCTTCATGGGAAGTACCACTGAGAGTGAAGACACTCTCAGTGCGAAGACGAAGCGAGAGCGCTTCGAGGAACAAGGTTGGGACTCGCTGAAGTCGAGTCCCTATTACGAATTGTTGAGGGAGTACAAAGACGTACTCCCGGAAGAGATTCCTGCGGAGCTTCCGCAGGATAAGGGCATTCAGCACGAGATTGATCTCGTGCCGGGCACGAAGTACTGTGTCACGCGGCAGTGGCCACTGCCGCGAGAGCAAGTGAAAGCGATCGACGACTTCTTTGAAAGTCGTCGTAAAGCAGGACAAGTGCGGGAATCAAAGTCCCCGCACAGTGCTCCGACGTTCTGTGTCAAGAAGCCACAGGGCGGATGGCGCATCGTTCATGCCTACAACAAGCTGAACGATGCGACGGTACCGGCGCAGACGCCGATACCGCGAAAAGATGTTATCATCGATTCGATGGCCGGGAGCACCGTTTACAGTGCTCTCGACTTGCGAGATGGATTTTATCAAATCCTAATGCGTGAGAGCGATATCCCTCTCACGGCAGTGAGCACGCCAAGCGGCATGCTCTGGGAATGGCTAGTAATGCCACAGGGGCTTAAGAACGCCCCTGCGACTTTCAACAGGTGCGTGACGCACTTGTTGCGCTCGGTGCGCGACTTCGCACCGAGCTACTTCGATGATGTATTCATCCACAGCCGGGCTGTGGACGGGAAGACCGACGTAGAGATGCACAGGGTGCATCTCCGGAAGCTACTTGAGCTTATGCGAAAGCATAAGCTCTACGCGAACCTGAAGAAGTGTATCTTCGGGGCGAGCGAGATACCCGTCCTCGGGTGTCTCGTAGGGAAGAATGGTGTTCGCCCTGACCCGGAAAAGGTCAGAGTGATCAATGAATGGCCAACGCCTTCAAGTGTCAAGGAACTGAGGCAGTTCCTTGGCTTGGCCACGTACTTGTGCAAGTACGTGGAGGATTATGCGGGCAAGATCCGCCCGCTGTCACAGCTTCTTAAGAAAGAAGCTGTGTGGAATTGGACACCCGATTGCCAAAAGGCATTCGATGCAGTCAAGCGGGGCTTGACTGAGGCGCCGATCTTGGCAGTGGCTGACCAAGATCGCCCATTTCACGTAGTGTGTGACGCATCCGATTTCGCGATCGGATGCGCGTTGATGCAGCACGATCACGAGGGCCGTGATCGTGTCGTCTACTACCAATCGCGTCAGCTGAAGCCAGCTGAGCGCAACTATCCGGTGCATGACAAGGAACTCCTTGCCATGAAGTATGCACTCGCAAAGTTCCGAGTGTACTTGCTTGGGAGTAGACCATTTGTGGTCTACACCGACCATGCTTCACTGCGCACCGCAGTGAAGTCGCCACACATTTCACAAAGAATGGCGAGATGGCTCTCATTCTTTGCGGAGTATAACTTCCGGGTCGAATACAAACCCGGAAGATTGAACGTGGTGGCCGACGCGTTATCACGTCGGCCGGACTATGCAGAAGCTGTTGACGTCAATGCCATTGACGCCATGCGATCGAGCAAACCCACATCATCTCTGTTGGATGATGTGAAGGCCGCGTACGCGCACGACGCGGACGCGAAGCTCTTGCTGGCCTATGGCACAGCGCCTTCTGACAAGTCCCGTCAGAAGCTGCCCAAGCACCTTCGAGCGCGTGCACACCGCTTTCGTGTGCACGACGGACTACTGCTTTACAATGCAGTCGACGACAACGCGGATCGCGTTGTCGTGCCAAATGACCATGACCTGCGACTCAGGATCATGTACGAGTATCATGATGCCCCGACTGCGGGACATCTCGGACGTGAGAAGACTTACGTCCTTCTCACGCGCGACTTCTACTGGCACCACCAGTATAAGTGGGTGCGCAAGTACATCCGTGCTTGCGAGGTATGCCAACGCGTAAAGCCTGCGCCATTCGCGCAGGCTCCACTGCAATCACTACCGACTCCGTCGGAGTGTTGGAAGTCCATGTCTTTGGACTTCATCTTTGGTCTTCCCCCGGACAGCGGAGGGAATACCGGTGTTGTGGTCTTCGTCGACCGCTTCAGCAAGATGGTACATCTTGCTGCGGTGCCGGCAGAAGTGACCGCGAAGCAGACGGCCCGTCTGTTCGTCGACATGGTGTTCAAACACCATGGCATGCCGACCGACATCGTGTCGGACAGAGACCCGCGCTTCACAGCGCACCTGTGGCAAGAAGTGTTTACACTTCTTGGGAGCCAGCTTTCCATGTCGACTGCGGATCATCCGCAGACGGACGGTCAAACCGAGCGCGTGAATCGCGTGCTCGTCGATATGTTGAAGAGCTACGCTCACTCGTTCCAATACTGGAGCGAGTGCTTATCGATGGCAGAGTTTGCCATCAATAACTCAGTGCATGCCTCGACCGGGCATACACCGTTCTACGTGAATGCCATGCGGCATCCACGTCTACCGAGTTTACTCGGAGTGATGGCTCCCACTTTAAGTGGGGGAGGATCTACGACTGCAATACAGCAGCCGCAGAAAACCGCTGACACTTGCACAGTGTCAGCTGCAACAATGGACAAACCACATGAGTCTGCGCAGGGCGCAGACTCCCCCAACAACAAGGCCAACGACCACGGGTCTGCGCAGGGCGCAGACACCGCAAAGAACCACGCAGAGGCCGGGCCTCTAGCGGAGAGCGAGCTGAATGACTTCAGCTCGGATGCAATCAGTTTCATCACCAAAAGACAAGCCGTGATTCGGTTTGTCCAAGACACAATAGCAGCTTCTGTTGATCAACAGAAGCTGAACGCAGACAATGCGGGCAGAGGCAACACAAATGAATTTAAAGTTGGTTCATTAGTTTTGTTAGCTACACAAAACCTGCCTAGACATGCAGTTTCGGATTTCGGAGCAAGCAAGCTTGCTCCGCGCTTCATCGGGCCGTTCACTGTGTTGGCACGGCACGGCAACGCATACACGCTAGACATACCGTCTAGCATGCGCCTCCATCCGACCTTTTACGTCGGACGGCTGAAGCCATACCTGCAGCACGAGCCATCTAGCTCGGCTGACCCGAAGCCTCGGCAGGAGCCGAGGCAGAAGCGGAGGACTTGGCCTCGGCGACGAGCAACCTCTCCTCCAGCGCGCGGACGCGCTGGAGCAACCCCTTCATCTGGGTCCCCAGCTCGACCTGGATATTCGAGGCGGTCTGCGAGACCGCCGCGACTTGGGCCTTCTGGTTCGCCAGCTCCTGTTTCAGGGCGGCGAACTCAGCGCCC OLD KEY: GCGGTCTGCGAGACCGCCGCGACTTGGGCCTTCTG NEW KEY: CCAGCTCCTGTTTCAGGGCGGCGAACTCAGCGCCC ........ _A_ 00X00000000000X00000000XX000X000000001X1X000000X00400000X000000000009090100 __99__ ........ _T_ 00000X00X0XXX0000000000000X00000000X00000000X000000000900000009009000000000 __99__ ........ _G_ 000X00000X00000XXX0XX0X000000X0X0000X00900X000000X60XX000000XX00X1XX1X0X80X __99__ ........ _C_ XX00X0XX00000X0000X00X000X0X00X0XXX009000X0X0XX0X00X001X0XXX001X01000000090 __99__ ........ _N_ 000000000000000000000000000000000000000000000000000000000000000000000000000 __99__ ........ ALL uuuuuuuuuuuuuuuuuuuuuuuuuuuuuuuuuuuttttsssssrrrrqqqqqqqpppppooooonmlkjgfedb __99__ ******** *** ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^**************************************** __99__ ######## CNS CCAGCTCCTGTTTCAGGGCGGCGAACTCAGCGCCCTGcAgACGCTCCACGgCGGtCACCCGGtCGtGGaGaGgcG __99__ ######## QLT XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX+X+XXXXXXXXXX!XXX+XXXXXXX+XX+XX+X+X++X __99__ >CONSENSUS__99__ Length: 3964 [gain: 40] ATGGCGTCGAGGTGACGAAGGCGTGTCAACTCCGGGAGTTGACGCTGCAAACAGTGCGGACGGTTGCAAACGTACCGCACTGACGCAATTTGCATGCTGTCGTGCAGCCGGGCTGCACGACGAAGCGCCATGCGATCAAGCCGGGCTTGATATCGCGCGCCCGCAGACAGGGTCTGCCGGCGAAGGGACACATTACCGTGCAGCCGGGCTGCACGAAGGAAAATGCGGTCAAGCCGGGCTTGATACCGCGCGCCCGCGGACAGGGTCCGCCGGCGAACGACTGTCCACGGCCGGGCCTGGACCAGAAGAACAACTGTGCGGAGCCGGGCTCCGCACAACAAGAAGACGGCGCAAGCGGAAAACGCTGCGCAAGTCTCGGTCCGGGACCGAGACGCAACAAGAGCAGTCTGCTGGGCAGACTGCGGCGGTGACGCCGAATGTCAAGACGCTAAGCGTCTTGACGCGCACCGATACTGGATTCCAGTATCGTGACATGGAACTCGCTAGTCCTCCGACGACGGCGTCGGAGTTGACTTCGCTTCCAGCCATGAGCTGGAAGCGCTTCACGCGCGACTTGCACGATGGACGCATCGAGCAAGTCTGCGTTCTTTCGGACAGCGAAAGAACGGAGAGCGAGAGCGAAGAGCTGAGGCAGCTCTTCATGGGAAGTACCACTGAGAGTGAAGACACTCTCAGTGCGAAGACGAAGCGAGAGCGCTTCGAGGAACAAGGTTGGGACTCGCTGAAGTCGAGTCCCTATTACGAATTGTTGAGGGAGTACAAAGACGTACTCCCGGAAGAGATTCCTGCGGAGCTTCCGCAGGATAAGGGCATTCAGCACGAGATTGATCTCGTGCCGGGCACGAAGTACTGTGTCACGCGGCAGTGGCCACTGCCGCGAGAGCAAGTGAAAGCGATCGACGACTTCTTTGAAAGTCGTCGTAAAGCAGGACAAGTGCGGGAATCAAAGTCCCCGCACAGTGCTCCGACGTTCTGTGTCAAGAAGCCACAGGGCGGATGGCGCATCGTTCATGCCTACAACAAGCTGAACGATGCGACGGTACCGGCGCAGACGCCGATACCGCGAAAAGATGTTATCATCGATTCGATGGCCGGGAGCACCGTTTACAGTGCTCTCGACTTGCGAGATGGATTTTATCAAATCCTAATGCGTGAGAGCGATATCCCTCTCACGGCAGTGAGCACGCCAAGCGGCATGCTCTGGGAATGGCTAGTAATGCCACAGGGGCTTAAGAACGCCCCTGCGACTTTCAACAGGTGCGTGACGCACTTGTTGCGCTCGGTGCGCGACTTCGCACCGAGCTACTTCGATGATGTATTCATCCACAGCCGGGCTGTGGACGGGAAGACCGACGTAGAGATGCACAGGGTGCATCTCCGGAAGCTACTTGAGCTTATGCGAAAGCATAAGCTCTACGCGAACCTGAAGAAGTGTATCTTCGGGGCGAGCGAGATACCCGTCCTCGGGTGTCTCGTAGGGAAGAATGGTGTTCGCCCTGACCCGGAAAAGGTCAGAGTGATCAATGAATGGCCAACGCCTTCAAGTGTCAAGGAACTGAGGCAGTTCCTTGGCTTGGCCACGTACTTGTGCAAGTACGTGGAGGATTATGCGGGCAAGATCCGCCCGCTGTCACAGCTTCTTAAGAAAGAAGCTGTGTGGAATTGGACACCCGATTGCCAAAAGGCATTCGATGCAGTCAAGCGGGGCTTGACTGAGGCGCCGATCTTGGCAGTGGCTGACCAAGATCGCCCATTTCACGTAGTGTGTGACGCATCCGATTTCGCGATCGGATGCGCGTTGATGCAGCACGATCACGAGGGCCGTGATCGTGTCGTCTACTACCAATCGCGTCAGCTGAAGCCAGCTGAGCGCAACTATCCGGTGCATGACAAGGAACTCCTTGCCATGAAGTATGCACTCGCAAAGTTCCGAGTGTACTTGCTTGGGAGTAGACCATTTGTGGTCTACACCGACCATGCTTCACTGCGCACCGCAGTGAAGTCGCCACACATTTCACAAAGAATGGCGAGATGGCTCTCATTCTTTGCGGAGTATAACTTCCGGGTCGAATACAAACCCGGAAGATTGAACGTGGTGGCCGACGCGTTATCACGTCGGCCGGACTATGCAGAAGCTGTTGACGTCAATGCCATTGACGCCATGCGATCGAGCAAACCCACATCATCTCTGTTGGATGATGTGAAGGCCGCGTACGCGCACGACGCGGACGCGAAGCTCTTGCTGGCCTATGGCACAGCGCCTTCTGACAAGTCCCGTCAGAAGCTGCCCAAGCACCTTCGAGCGCGTGCACACCGCTTTCGTGTGCACGACGGACTACTGCTTTACAATGCAGTCGACGACAACGCGGATCGCGTTGTCGTGCCAAATGACCATGACCTGCGACTCAGGATCATGTACGAGTATCATGATGCCCCGACTGCGGGACATCTCGGACGTGAGAAGACTTACGTCCTTCTCACGCGCGACTTCTACTGGCACCACCAGTATAAGTGGGTGCGCAAGTACATCCGTGCTTGCGAGGTATGCCAACGCGTAAAGCCTGCGCCATTCGCGCAGGCTCCACTGCAATCACTACCGACTCCGTCGGAGTGTTGGAAGTCCATGTCTTTGGACTTCATCTTTGGTCTTCCCCCGGACAGCGGAGGGAATACCGGTGTTGTGGTCTTCGTCGACCGCTTCAGCAAGATGGTACATCTTGCTGCGGTGCCGGCAGAAGTGACCGCGAAGCAGACGGCCCGTCTGTTCGTCGACATGGTGTTCAAACACCATGGCATGCCGACCGACATCGTGTCGGACAGAGACCCGCGCTTCACAGCGCACCTGTGGCAAGAAGTGTTTACACTTCTTGGGAGCCAGCTTTCCATGTCGACTGCGGATCATCCGCAGACGGACGGTCAAACCGAGCGCGTGAATCGCGTGCTCGTCGATATGTTGAAGAGCTACGCTCACTCGTTCCAATACTGGAGCGAGTGCTTATCGATGGCAGAGTTTGCCATCAATAACTCAGTGCATGCCTCGACCGGGCATACACCGTTCTACGTGAATGCCATGCGGCATCCACGTCTACCGAGTTTACTCGGAGTGATGGCTCCCACTTTAAGTGGGGGAGGATCTACGACTGCAATACAGCAGCCGCAGAAAACCGCTGACACTTGCACAGTGTCAGCTGCAACAATGGACAAACCACATGAGTCTGCGCAGGGCGCAGACTCCCCCAACAACAAGGCCAACGACCACGGGTCTGCGCAGGGCGCAGACACCGCAAAGAACCACGCAGAGGCCGGGCCTCTAGCGGAGAGCGAGCTGAATGACTTCAGCTCGGATGCAATCAGTTTCATCACCAAAAGACAAGCCGTGATTCGGTTTGTCCAAGACACAATAGCAGCTTCTGTTGATCAACAGAAGCTGAACGCAGACAATGCGGGCAGAGGCAACACAAATGAATTTAAAGTTGGTTCATTAGTTTTGTTAGCTACACAAAACCTGCCTAGACATGCAGTTTCGGATTTCGGAGCAAGCAAGCTTGCTCCGCGCTTCATCGGGCCGTTCACTGTGTTGGCACGGCACGGCAACGCATACACGCTAGACATACCGTCTAGCATGCGCCTCCATCCGACCTTTTACGTCGGACGGCTGAAGCCATACCTGCAGCACGAGCCATCTAGCTCGGCTGACCCGAAGCCTCGGCAGGAGCCGAGGCAGAAGCGGAGGACTTGGCCTCGGCGACGAGCAACCTCTCCTCCAGCGCGCGGACGCGCTGGAGCAACCCCTTCATCTGGGTCCCCAGCTCGACCTGGATATTCGAGGCGGTCTGCGAGACCGCCGCGACTTGGGCCTTCTGGTTCGCCAGCTCCTGTTTCAGGGCGGCGAACTCAGCGCCCTGCAGACGCTCCACGGCGGTCACCCGGTCGTGGAGAGGCG OLD KEY: CCAGCTCCTGTTTCAGGGCGGCGAACTCAGCGCCC NEW KEY: ACGCTCCACGGCGGTCACCCGGTCGTGGAGAGGCG ........ _A_ X000000X00000000X00000000000X0X0000090X000X00X00000000000900909000000000000 __100__ ........ _T_ 0000X000000000X0000000X00X00000000000900900X00000000000X00900X000000001180X __100__ ........ _G_ 00X000000XX0XX000000XX00X0XX0X0XX0X010000X0000X000XXXX009000000000X9X909190 __100__ ........ _C_ 0X0X0XX0X00X000X0XXX000X000000000X0X000X0000X00XXX000090000X000X9X000090100 __100__ ........ _N_ 000000000000000000000000000000000000000000000000000000000000000000000000000 __100__ ........ ALL rrrrrrrrrrrrrrrrrrrrrrrrrrrrrrrrrrrrrrqqqqqqqqppppppppooooooommlkkjjjhfedcb __100__ ******** *** ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^**************************************** __100__ ######## CNS ACGCTCCACGGCGGTCACCCGGTCGTGGAGAGGCGCatACtGATCAGCCCGGGGcTgatCaTaCcCGgGgcgtgT __100__ ######## QLT XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX++XX+XXXXXXXXXXXXX+X+++X+X+X+XX+X+++++X __100__ >CONSENSUS__100__ Length: 4004 [gain: 40] ATGGCGTCGAGGTGACGAAGGCGTGTCAACTCCGGGAGTTGACGCTGCAAACAGTGCGGACGGTTGCAAACGTACCGCACTGACGCAATTTGCATGCTGTCGTGCAGCCGGGCTGCACGACGAAGCGCCATGCGATCAAGCCGGGCTTGATATCGCGCGCCCGCAGACAGGGTCTGCCGGCGAAGGGACACATTACCGTGCAGCCGGGCTGCACGAAGGAAAATGCGGTCAAGCCGGGCTTGATACCGCGCGCCCGCGGACAGGGTCCGCCGGCGAACGACTGTCCACGGCCGGGCCTGGACCAGAAGAACAACTGTGCGGAGCCGGGCTCCGCACAACAAGAAGACGGCGCAAGCGGAAAACGCTGCGCAAGTCTCGGTCCGGGACCGAGACGCAACAAGAGCAGTCTGCTGGGCAGACTGCGGCGGTGACGCCGAATGTCAAGACGCTAAGCGTCTTGACGCGCACCGATACTGGATTCCAGTATCGTGACATGGAACTCGCTAGTCCTCCGACGACGGCGTCGGAGTTGACTTCGCTTCCAGCCATGAGCTGGAAGCGCTTCACGCGCGACTTGCACGATGGACGCATCGAGCAAGTCTGCGTTCTTTCGGACAGCGAAAGAACGGAGAGCGAGAGCGAAGAGCTGAGGCAGCTCTTCATGGGAAGTACCACTGAGAGTGAAGACACTCTCAGTGCGAAGACGAAGCGAGAGCGCTTCGAGGAACAAGGTTGGGACTCGCTGAAGTCGAGTCCCTATTACGAATTGTTGAGGGAGTACAAAGACGTACTCCCGGAAGAGATTCCTGCGGAGCTTCCGCAGGATAAGGGCATTCAGCACGAGATTGATCTCGTGCCGGGCACGAAGTACTGTGTCACGCGGCAGTGGCCACTGCCGCGAGAGCAAGTGAAAGCGATCGACGACTTCTTTGAAAGTCGTCGTAAAGCAGGACAAGTGCGGGAATCAAAGTCCCCGCACAGTGCTCCGACGTTCTGTGTCAAGAAGCCACAGGGCGGATGGCGCATCGTTCATGCCTACAACAAGCTGAACGATGCGACGGTACCGGCGCAGACGCCGATACCGCGAAAAGATGTTATCATCGATTCGATGGCCGGGAGCACCGTTTACAGTGCTCTCGACTTGCGAGATGGATTTTATCAAATCCTAATGCGTGAGAGCGATATCCCTCTCACGGCAGTGAGCACGCCAAGCGGCATGCTCTGGGAATGGCTAGTAATGCCACAGGGGCTTAAGAACGCCCCTGCGACTTTCAACAGGTGCGTGACGCACTTGTTGCGCTCGGTGCGCGACTTCGCACCGAGCTACTTCGATGATGTATTCATCCACAGCCGGGCTGTGGACGGGAAGACCGACGTAGAGATGCACAGGGTGCATCTCCGGAAGCTACTTGAGCTTATGCGAAAGCATAAGCTCTACGCGAACCTGAAGAAGTGTATCTTCGGGGCGAGCGAGATACCCGTCCTCGGGTGTCTCGTAGGGAAGAATGGTGTTCGCCCTGACCCGGAAAAGGTCAGAGTGATCAATGAATGGCCAACGCCTTCAAGTGTCAAGGAACTGAGGCAGTTCCTTGGCTTGGCCACGTACTTGTGCAAGTACGTGGAGGATTATGCGGGCAAGATCCGCCCGCTGTCACAGCTTCTTAAGAAAGAAGCTGTGTGGAATTGGACACCCGATTGCCAAAAGGCATTCGATGCAGTCAAGCGGGGCTTGACTGAGGCGCCGATCTTGGCAGTGGCTGACCAAGATCGCCCATTTCACGTAGTGTGTGACGCATCCGATTTCGCGATCGGATGCGCGTTGATGCAGCACGATCACGAGGGCCGTGATCGTGTCGTCTACTACCAATCGCGTCAGCTGAAGCCAGCTGAGCGCAACTATCCGGTGCATGACAAGGAACTCCTTGCCATGAAGTATGCACTCGCAAAGTTCCGAGTGTACTTGCTTGGGAGTAGACCATTTGTGGTCTACACCGACCATGCTTCACTGCGCACCGCAGTGAAGTCGCCACACATTTCACAAAGAATGGCGAGATGGCTCTCATTCTTTGCGGAGTATAACTTCCGGGTCGAATACAAACCCGGAAGATTGAACGTGGTGGCCGACGCGTTATCACGTCGGCCGGACTATGCAGAAGCTGTTGACGTCAATGCCATTGACGCCATGCGATCGAGCAAACCCACATCATCTCTGTTGGATGATGTGAAGGCCGCGTACGCGCACGACGCGGACGCGAAGCTCTTGCTGGCCTATGGCACAGCGCCTTCTGACAAGTCCCGTCAGAAGCTGCCCAAGCACCTTCGAGCGCGTGCACACCGCTTTCGTGTGCACGACGGACTACTGCTTTACAATGCAGTCGACGACAACGCGGATCGCGTTGTCGTGCCAAATGACCATGACCTGCGACTCAGGATCATGTACGAGTATCATGATGCCCCGACTGCGGGACATCTCGGACGTGAGAAGACTTACGTCCTTCTCACGCGCGACTTCTACTGGCACCACCAGTATAAGTGGGTGCGCAAGTACATCCGTGCTTGCGAGGTATGCCAACGCGTAAAGCCTGCGCCATTCGCGCAGGCTCCACTGCAATCACTACCGACTCCGTCGGAGTGTTGGAAGTCCATGTCTTTGGACTTCATCTTTGGTCTTCCCCCGGACAGCGGAGGGAATACCGGTGTTGTGGTCTTCGTCGACCGCTTCAGCAAGATGGTACATCTTGCTGCGGTGCCGGCAGAAGTGACCGCGAAGCAGACGGCCCGTCTGTTCGTCGACATGGTGTTCAAACACCATGGCATGCCGACCGACATCGTGTCGGACAGAGACCCGCGCTTCACAGCGCACCTGTGGCAAGAAGTGTTTACACTTCTTGGGAGCCAGCTTTCCATGTCGACTGCGGATCATCCGCAGACGGACGGTCAAACCGAGCGCGTGAATCGCGTGCTCGTCGATATGTTGAAGAGCTACGCTCACTCGTTCCAATACTGGAGCGAGTGCTTATCGATGGCAGAGTTTGCCATCAATAACTCAGTGCATGCCTCGACCGGGCATACACCGTTCTACGTGAATGCCATGCGGCATCCACGTCTACCGAGTTTACTCGGAGTGATGGCTCCCACTTTAAGTGGGGGAGGATCTACGACTGCAATACAGCAGCCGCAGAAAACCGCTGACACTTGCACAGTGTCAGCTGCAACAATGGACAAACCACATGAGTCTGCGCAGGGCGCAGACTCCCCCAACAACAAGGCCAACGACCACGGGTCTGCGCAGGGCGCAGACACCGCAAAGAACCACGCAGAGGCCGGGCCTCTAGCGGAGAGCGAGCTGAATGACTTCAGCTCGGATGCAATCAGTTTCATCACCAAAAGACAAGCCGTGATTCGGTTTGTCCAAGACACAATAGCAGCTTCTGTTGATCAACAGAAGCTGAACGCAGACAATGCGGGCAGAGGCAACACAAATGAATTTAAAGTTGGTTCATTAGTTTTGTTAGCTACACAAAACCTGCCTAGACATGCAGTTTCGGATTTCGGAGCAAGCAAGCTTGCTCCGCGCTTCATCGGGCCGTTCACTGTGTTGGCACGGCACGGCAACGCATACACGCTAGACATACCGTCTAGCATGCGCCTCCATCCGACCTTTTACGTCGGACGGCTGAAGCCATACCTGCAGCACGAGCCATCTAGCTCGGCTGACCCGAAGCCTCGGCAGGAGCCGAGGCAGAAGCGGAGGACTTGGCCTCGGCGACGAGCAACCTCTCCTCCAGCGCGCGGACGCGCTGGAGCAACCCCTTCATCTGGGTCCCCAGCTCGACCTGGATATTCGAGGCGGTCTGCGAGACCGCCGCGACTTGGGCCTTCTGGTTCGCCAGCTCCTGTTTCAGGGCGGCGAACTCAGCGCCCTGCAGACGCTCCACGGCGGTCACCCGGTCGTGGAGAGGCGCATACTGATCAGCCCGGGGCTGATCATACCCGGGGCGTGT OLD KEY: ACGCTCCACGGCGGTCACCCGGTCGTGGAGAGGCG NEW KEY: TGATCAGCCCGGGGCTGATCATACCCGGGGCGTGT ........ _A_ 00X00X00000000000X00X0X0000000000000000900000000900000090000009000001000001 __101__ ........ _T_ X00X00000000000X00X00X0000000000X0XX000000000000000000009000800000000000070 __101__ ........ _G_ 0X0000X000XXXX00X000000000XXXX0X0X00000000000900000900900009091090007099010 __101__ ........ _C_ 0000X00XXX0000X0000X000XXX0000X00000XXX1XXXXX0XX1XX0XX011XX110090XX91X11929 __101__ ........ _N_ 000000000000000000000000000000000000000000000000000000000000000000000000000 __101__ ........ ALL wwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwvvvuuutttssssrrrrrqqppoooooomjge __101__ ******** *** ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^**************************************** __101__ ######## CNS TGATCAGCCCGGGGCTGATCATACCCGGGGCGTGTTCCCaCCCCCgCCaCCgCCgatCCgtgacgCCcgCggctc __101__ ######## QLT XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX+XXXXX+XX+XX+XX+++XX++++++XX+@X+++@+ __101__ >CONSENSUS__101__ Length: 4044 [gain: 40] ATGGCGTCGAGGTGACGAAGGCGTGTCAACTCCGGGAGTTGACGCTGCAAACAGTGCGGACGGTTGCAAACGTACCGCACTGACGCAATTTGCATGCTGTCGTGCAGCCGGGCTGCACGACGAAGCGCCATGCGATCAAGCCGGGCTTGATATCGCGCGCCCGCAGACAGGGTCTGCCGGCGAAGGGACACATTACCGTGCAGCCGGGCTGCACGAAGGAAAATGCGGTCAAGCCGGGCTTGATACCGCGCGCCCGCGGACAGGGTCCGCCGGCGAACGACTGTCCACGGCCGGGCCTGGACCAGAAGAACAACTGTGCGGAGCCGGGCTCCGCACAACAAGAAGACGGCGCAAGCGGAAAACGCTGCGCAAGTCTCGGTCCGGGACCGAGACGCAACAAGAGCAGTCTGCTGGGCAGACTGCGGCGGTGACGCCGAATGTCAAGACGCTAAGCGTCTTGACGCGCACCGATACTGGATTCCAGTATCGTGACATGGAACTCGCTAGTCCTCCGACGACGGCGTCGGAGTTGACTTCGCTTCCAGCCATGAGCTGGAAGCGCTTCACGCGCGACTTGCACGATGGACGCATCGAGCAAGTCTGCGTTCTTTCGGACAGCGAAAGAACGGAGAGCGAGAGCGAAGAGCTGAGGCAGCTCTTCATGGGAAGTACCACTGAGAGTGAAGACACTCTCAGTGCGAAGACGAAGCGAGAGCGCTTCGAGGAACAAGGTTGGGACTCGCTGAAGTCGAGTCCCTATTACGAATTGTTGAGGGAGTACAAAGACGTACTCCCGGAAGAGATTCCTGCGGAGCTTCCGCAGGATAAGGGCATTCAGCACGAGATTGATCTCGTGCCGGGCACGAAGTACTGTGTCACGCGGCAGTGGCCACTGCCGCGAGAGCAAGTGAAAGCGATCGACGACTTCTTTGAAAGTCGTCGTAAAGCAGGACAAGTGCGGGAATCAAAGTCCCCGCACAGTGCTCCGACGTTCTGTGTCAAGAAGCCACAGGGCGGATGGCGCATCGTTCATGCCTACAACAAGCTGAACGATGCGACGGTACCGGCGCAGACGCCGATACCGCGAAAAGATGTTATCATCGATTCGATGGCCGGGAGCACCGTTTACAGTGCTCTCGACTTGCGAGATGGATTTTATCAAATCCTAATGCGTGAGAGCGATATCCCTCTCACGGCAGTGAGCACGCCAAGCGGCATGCTCTGGGAATGGCTAGTAATGCCACAGGGGCTTAAGAACGCCCCTGCGACTTTCAACAGGTGCGTGACGCACTTGTTGCGCTCGGTGCGCGACTTCGCACCGAGCTACTTCGATGATGTATTCATCCACAGCCGGGCTGTGGACGGGAAGACCGACGTAGAGATGCACAGGGTGCATCTCCGGAAGCTACTTGAGCTTATGCGAAAGCATAAGCTCTACGCGAACCTGAAGAAGTGTATCTTCGGGGCGAGCGAGATACCCGTCCTCGGGTGTCTCGTAGGGAAGAATGGTGTTCGCCCTGACCCGGAAAAGGTCAGAGTGATCAATGAATGGCCAACGCCTTCAAGTGTCAAGGAACTGAGGCAGTTCCTTGGCTTGGCCACGTACTTGTGCAAGTACGTGGAGGATTATGCGGGCAAGATCCGCCCGCTGTCACAGCTTCTTAAGAAAGAAGCTGTGTGGAATTGGACACCCGATTGCCAAAAGGCATTCGATGCAGTCAAGCGGGGCTTGACTGAGGCGCCGATCTTGGCAGTGGCTGACCAAGATCGCCCATTTCACGTAGTGTGTGACGCATCCGATTTCGCGATCGGATGCGCGTTGATGCAGCACGATCACGAGGGCCGTGATCGTGTCGTCTACTACCAATCGCGTCAGCTGAAGCCAGCTGAGCGCAACTATCCGGTGCATGACAAGGAACTCCTTGCCATGAAGTATGCACTCGCAAAGTTCCGAGTGTACTTGCTTGGGAGTAGACCATTTGTGGTCTACACCGACCATGCTTCACTGCGCACCGCAGTGAAGTCGCCACACATTTCACAAAGAATGGCGAGATGGCTCTCATTCTTTGCGGAGTATAACTTCCGGGTCGAATACAAACCCGGAAGATTGAACGTGGTGGCCGACGCGTTATCACGTCGGCCGGACTATGCAGAAGCTGTTGACGTCAATGCCATTGACGCCATGCGATCGAGCAAACCCACATCATCTCTGTTGGATGATGTGAAGGCCGCGTACGCGCACGACGCGGACGCGAAGCTCTTGCTGGCCTATGGCACAGCGCCTTCTGACAAGTCCCGTCAGAAGCTGCCCAAGCACCTTCGAGCGCGTGCACACCGCTTTCGTGTGCACGACGGACTACTGCTTTACAATGCAGTCGACGACAACGCGGATCGCGTTGTCGTGCCAAATGACCATGACCTGCGACTCAGGATCATGTACGAGTATCATGATGCCCCGACTGCGGGACATCTCGGACGTGAGAAGACTTACGTCCTTCTCACGCGCGACTTCTACTGGCACCACCAGTATAAGTGGGTGCGCAAGTACATCCGTGCTTGCGAGGTATGCCAACGCGTAAAGCCTGCGCCATTCGCGCAGGCTCCACTGCAATCACTACCGACTCCGTCGGAGTGTTGGAAGTCCATGTCTTTGGACTTCATCTTTGGTCTTCCCCCGGACAGCGGAGGGAATACCGGTGTTGTGGTCTTCGTCGACCGCTTCAGCAAGATGGTACATCTTGCTGCGGTGCCGGCAGAAGTGACCGCGAAGCAGACGGCCCGTCTGTTCGTCGACATGGTGTTCAAACACCATGGCATGCCGACCGACATCGTGTCGGACAGAGACCCGCGCTTCACAGCGCACCTGTGGCAAGAAGTGTTTACACTTCTTGGGAGCCAGCTTTCCATGTCGACTGCGGATCATCCGCAGACGGACGGTCAAACCGAGCGCGTGAATCGCGTGCTCGTCGATATGTTGAAGAGCTACGCTCACTCGTTCCAATACTGGAGCGAGTGCTTATCGATGGCAGAGTTTGCCATCAATAACTCAGTGCATGCCTCGACCGGGCATACACCGTTCTACGTGAATGCCATGCGGCATCCACGTCTACCGAGTTTACTCGGAGTGATGGCTCCCACTTTAAGTGGGGGAGGATCTACGACTGCAATACAGCAGCCGCAGAAAACCGCTGACACTTGCACAGTGTCAGCTGCAACAATGGACAAACCACATGAGTCTGCGCAGGGCGCAGACTCCCCCAACAACAAGGCCAACGACCACGGGTCTGCGCAGGGCGCAGACACCGCAAAGAACCACGCAGAGGCCGGGCCTCTAGCGGAGAGCGAGCTGAATGACTTCAGCTCGGATGCAATCAGTTTCATCACCAAAAGACAAGCCGTGATTCGGTTTGTCCAAGACACAATAGCAGCTTCTGTTGATCAACAGAAGCTGAACGCAGACAATGCGGGCAGAGGCAACACAAATGAATTTAAAGTTGGTTCATTAGTTTTGTTAGCTACACAAAACCTGCCTAGACATGCAGTTTCGGATTTCGGAGCAAGCAAGCTTGCTCCGCGCTTCATCGGGCCGTTCACTGTGTTGGCACGGCACGGCAACGCATACACGCTAGACATACCGTCTAGCATGCGCCTCCATCCGACCTTTTACGTCGGACGGCTGAAGCCATACCTGCAGCACGAGCCATCTAGCTCGGCTGACCCGAAGCCTCGGCAGGAGCCGAGGCAGAAGCGGAGGACTTGGCCTCGGCGACGAGCAACCTCTCCTCCAGCGCGCGGACGCGCTGGAGCAACCCCTTCATCTGGGTCCCCAGCTCGACCTGGATATTCGAGGCGGTCTGCGAGACCGCCGCGACTTGGGCCTTCTGGTTCGCCAGCTCCTGTTTCAGGGCGGCGAACTCAGCGCCCTGCAGACGCTCCACGGCGGTCACCCGGTCGTGGAGAGGCGCATACTGATCAGCCCGGGGCTGATCATACCCGGGGCGTGTTCCCACCCCCGCCACCGCCGATCCGTGACGCCCGCGGCTC OLD KEY: TGATCAGCCCGGGGCTGATCATACCCGGGGCGTGT NEW KEY: CCCCCGCCACCGCCGATCCGTGACGCCCGCGGCTC ........ _A_ 00000000X000000X000000X000000000000XX000000009000000900009000000900X0X00900 __102__ ........ _T_ 0000000000000000X000X000000000000X00000000X000XX0XX0000000XX0XX0000090090X0 __102__ ........ _G_ 00000X00000X00X0000X0X00X000X0XX00000000X00XX000X00X0X0XX000X00X10000090000 __102__ ........ _C_ XXXXX0XX0XX0XX000XX0000X0XXX0X00X0X00XXX0X000000000000X0000000000XX0100000X __102__ ........ _N_ 000000000000000000000000000000000000000000000000000000000000000000000000000 __102__ ........ ALL wwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwvvvvuuuuuttttssssrrrqqqqqppppoooonlkjhfc __102__ ******** *** ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^**************************************** __102__ ######## CNS CCCCCGCCACCGCCGATCCGTGACGCCCGCGGCTCAACCCGCTGGaTTGTTGaGCGGaTTGTTGaCCAtAgtaTC __102__ ######## QLT XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX+XXXXXX+XXXX+XXXXXX+XXX+X+++XX __102__ >CONSENSUS__102__ Length: 4084 [gain: 40] ATGGCGTCGAGGTGACGAAGGCGTGTCAACTCCGGGAGTTGACGCTGCAAACAGTGCGGACGGTTGCAAACGTACCGCACTGACGCAATTTGCATGCTGTCGTGCAGCCGGGCTGCACGACGAAGCGCCATGCGATCAAGCCGGGCTTGATATCGCGCGCCCGCAGACAGGGTCTGCCGGCGAAGGGACACATTACCGTGCAGCCGGGCTGCACGAAGGAAAATGCGGTCAAGCCGGGCTTGATACCGCGCGCCCGCGGACAGGGTCCGCCGGCGAACGACTGTCCACGGCCGGGCCTGGACCAGAAGAACAACTGTGCGGAGCCGGGCTCCGCACAACAAGAAGACGGCGCAAGCGGAAAACGCTGCGCAAGTCTCGGTCCGGGACCGAGACGCAACAAGAGCAGTCTGCTGGGCAGACTGCGGCGGTGACGCCGAATGTCAAGACGCTAAGCGTCTTGACGCGCACCGATACTGGATTCCAGTATCGTGACATGGAACTCGCTAGTCCTCCGACGACGGCGTCGGAGTTGACTTCGCTTCCAGCCATGAGCTGGAAGCGCTTCACGCGCGACTTGCACGATGGACGCATCGAGCAAGTCTGCGTTCTTTCGGACAGCGAAAGAACGGAGAGCGAGAGCGAAGAGCTGAGGCAGCTCTTCATGGGAAGTACCACTGAGAGTGAAGACACTCTCAGTGCGAAGACGAAGCGAGAGCGCTTCGAGGAACAAGGTTGGGACTCGCTGAAGTCGAGTCCCTATTACGAATTGTTGAGGGAGTACAAAGACGTACTCCCGGAAGAGATTCCTGCGGAGCTTCCGCAGGATAAGGGCATTCAGCACGAGATTGATCTCGTGCCGGGCACGAAGTACTGTGTCACGCGGCAGTGGCCACTGCCGCGAGAGCAAGTGAAAGCGATCGACGACTTCTTTGAAAGTCGTCGTAAAGCAGGACAAGTGCGGGAATCAAAGTCCCCGCACAGTGCTCCGACGTTCTGTGTCAAGAAGCCACAGGGCGGATGGCGCATCGTTCATGCCTACAACAAGCTGAACGATGCGACGGTACCGGCGCAGACGCCGATACCGCGAAAAGATGTTATCATCGATTCGATGGCCGGGAGCACCGTTTACAGTGCTCTCGACTTGCGAGATGGATTTTATCAAATCCTAATGCGTGAGAGCGATATCCCTCTCACGGCAGTGAGCACGCCAAGCGGCATGCTCTGGGAATGGCTAGTAATGCCACAGGGGCTTAAGAACGCCCCTGCGACTTTCAACAGGTGCGTGACGCACTTGTTGCGCTCGGTGCGCGACTTCGCACCGAGCTACTTCGATGATGTATTCATCCACAGCCGGGCTGTGGACGGGAAGACCGACGTAGAGATGCACAGGGTGCATCTCCGGAAGCTACTTGAGCTTATGCGAAAGCATAAGCTCTACGCGAACCTGAAGAAGTGTATCTTCGGGGCGAGCGAGATACCCGTCCTCGGGTGTCTCGTAGGGAAGAATGGTGTTCGCCCTGACCCGGAAAAGGTCAGAGTGATCAATGAATGGCCAACGCCTTCAAGTGTCAAGGAACTGAGGCAGTTCCTTGGCTTGGCCACGTACTTGTGCAAGTACGTGGAGGATTATGCGGGCAAGATCCGCCCGCTGTCACAGCTTCTTAAGAAAGAAGCTGTGTGGAATTGGACACCCGATTGCCAAAAGGCATTCGATGCAGTCAAGCGGGGCTTGACTGAGGCGCCGATCTTGGCAGTGGCTGACCAAGATCGCCCATTTCACGTAGTGTGTGACGCATCCGATTTCGCGATCGGATGCGCGTTGATGCAGCACGATCACGAGGGCCGTGATCGTGTCGTCTACTACCAATCGCGTCAGCTGAAGCCAGCTGAGCGCAACTATCCGGTGCATGACAAGGAACTCCTTGCCATGAAGTATGCACTCGCAAAGTTCCGAGTGTACTTGCTTGGGAGTAGACCATTTGTGGTCTACACCGACCATGCTTCACTGCGCACCGCAGTGAAGTCGCCACACATTTCACAAAGAATGGCGAGATGGCTCTCATTCTTTGCGGAGTATAACTTCCGGGTCGAATACAAACCCGGAAGATTGAACGTGGTGGCCGACGCGTTATCACGTCGGCCGGACTATGCAGAAGCTGTTGACGTCAATGCCATTGACGCCATGCGATCGAGCAAACCCACATCATCTCTGTTGGATGATGTGAAGGCCGCGTACGCGCACGACGCGGACGCGAAGCTCTTGCTGGCCTATGGCACAGCGCCTTCTGACAAGTCCCGTCAGAAGCTGCCCAAGCACCTTCGAGCGCGTGCACACCGCTTTCGTGTGCACGACGGACTACTGCTTTACAATGCAGTCGACGACAACGCGGATCGCGTTGTCGTGCCAAATGACCATGACCTGCGACTCAGGATCATGTACGAGTATCATGATGCCCCGACTGCGGGACATCTCGGACGTGAGAAGACTTACGTCCTTCTCACGCGCGACTTCTACTGGCACCACCAGTATAAGTGGGTGCGCAAGTACATCCGTGCTTGCGAGGTATGCCAACGCGTAAAGCCTGCGCCATTCGCGCAGGCTCCACTGCAATCACTACCGACTCCGTCGGAGTGTTGGAAGTCCATGTCTTTGGACTTCATCTTTGGTCTTCCCCCGGACAGCGGAGGGAATACCGGTGTTGTGGTCTTCGTCGACCGCTTCAGCAAGATGGTACATCTTGCTGCGGTGCCGGCAGAAGTGACCGCGAAGCAGACGGCCCGTCTGTTCGTCGACATGGTGTTCAAACACCATGGCATGCCGACCGACATCGTGTCGGACAGAGACCCGCGCTTCACAGCGCACCTGTGGCAAGAAGTGTTTACACTTCTTGGGAGCCAGCTTTCCATGTCGACTGCGGATCATCCGCAGACGGACGGTCAAACCGAGCGCGTGAATCGCGTGCTCGTCGATATGTTGAAGAGCTACGCTCACTCGTTCCAATACTGGAGCGAGTGCTTATCGATGGCAGAGTTTGCCATCAATAACTCAGTGCATGCCTCGACCGGGCATACACCGTTCTACGTGAATGCCATGCGGCATCCACGTCTACCGAGTTTACTCGGAGTGATGGCTCCCACTTTAAGTGGGGGAGGATCTACGACTGCAATACAGCAGCCGCAGAAAACCGCTGACACTTGCACAGTGTCAGCTGCAACAATGGACAAACCACATGAGTCTGCGCAGGGCGCAGACTCCCCCAACAACAAGGCCAACGACCACGGGTCTGCGCAGGGCGCAGACACCGCAAAGAACCACGCAGAGGCCGGGCCTCTAGCGGAGAGCGAGCTGAATGACTTCAGCTCGGATGCAATCAGTTTCATCACCAAAAGACAAGCCGTGATTCGGTTTGTCCAAGACACAATAGCAGCTTCTGTTGATCAACAGAAGCTGAACGCAGACAATGCGGGCAGAGGCAACACAAATGAATTTAAAGTTGGTTCATTAGTTTTGTTAGCTACACAAAACCTGCCTAGACATGCAGTTTCGGATTTCGGAGCAAGCAAGCTTGCTCCGCGCTTCATCGGGCCGTTCACTGTGTTGGCACGGCACGGCAACGCATACACGCTAGACATACCGTCTAGCATGCGCCTCCATCCGACCTTTTACGTCGGACGGCTGAAGCCATACCTGCAGCACGAGCCATCTAGCTCGGCTGACCCGAAGCCTCGGCAGGAGCCGAGGCAGAAGCGGAGGACTTGGCCTCGGCGACGAGCAACCTCTCCTCCAGCGCGCGGACGCGCTGGAGCAACCCCTTCATCTGGGTCCCCAGCTCGACCTGGATATTCGAGGCGGTCTGCGAGACCGCCGCGACTTGGGCCTTCTGGTTCGCCAGCTCCTGTTTCAGGGCGGCGAACTCAGCGCCCTGCAGACGCTCCACGGCGGTCACCCGGTCGTGGAGAGGCGCATACTGATCAGCCCGGGGCTGATCATACCCGGGGCGTGTTCCCACCCCCGCCACCGCCGATCCGTGACGCCCGCGGCTCAACCCGCTGGATTGTTGAGCGGATTGTTGACCATAGTATC OLD KEY: CCCCCGCCACCGCCGATCCGTGACGCCCGCGGCTC NEW KEY: GCTGGATTGTTGAGCGGATTGTTGACCATAGTATC ........ _A_ 00000X000000X0000X000000X00X0X00X00000XXXX00XX00000XX0000000000000009000000 __103__ ........ _T_ 00X000XX0XX0000000XX0XX00000X00X0X000000000000000900000000X00XXXX0090XX00XX __103__ ........ _G_ X00XX000X00X0X0XX000X00X000000X000000X00000X000000000XXXX000900000900000X00 __103__ ........ _C_ 0X000000000000X0000000000XX0000000XXX00000X000XXX1X00000090X00000X00000X000 __103__ ........ _N_ 000000000000000000000000000000000000000000000000000000000000000000000000000 __103__ ........ ALL wwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwvvvuuuttsssrqqqpoomji __103__ ******** *** ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^**************************************** __103__ ######## CNS GCTGGATTGTTGAGCGGATTGTTGACCATAGTATCCCGAAAACGAACCCtCAAGGGGcTCgTTTTCgtaTTCGTT __103__ ######## QLT XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX+XXXXXXX+XX+XXXXX+++XXXXXX __103__ >CONSENSUS__103__ Length: 4124 [gain: 40] ATGGCGTCGAGGTGACGAAGGCGTGTCAACTCCGGGAGTTGACGCTGCAAACAGTGCGGACGGTTGCAAACGTACCGCACTGACGCAATTTGCATGCTGTCGTGCAGCCGGGCTGCACGACGAAGCGCCATGCGATCAAGCCGGGCTTGATATCGCGCGCCCGCAGACAGGGTCTGCCGGCGAAGGGACACATTACCGTGCAGCCGGGCTGCACGAAGGAAAATGCGGTCAAGCCGGGCTTGATACCGCGCGCCCGCGGACAGGGTCCGCCGGCGAACGACTGTCCACGGCCGGGCCTGGACCAGAAGAACAACTGTGCGGAGCCGGGCTCCGCACAACAAGAAGACGGCGCAAGCGGAAAACGCTGCGCAAGTCTCGGTCCGGGACCGAGACGCAACAAGAGCAGTCTGCTGGGCAGACTGCGGCGGTGACGCCGAATGTCAAGACGCTAAGCGTCTTGACGCGCACCGATACTGGATTCCAGTATCGTGACATGGAACTCGCTAGTCCTCCGACGACGGCGTCGGAGTTGACTTCGCTTCCAGCCATGAGCTGGAAGCGCTTCACGCGCGACTTGCACGATGGACGCATCGAGCAAGTCTGCGTTCTTTCGGACAGCGAAAGAACGGAGAGCGAGAGCGAAGAGCTGAGGCAGCTCTTCATGGGAAGTACCACTGAGAGTGAAGACACTCTCAGTGCGAAGACGAAGCGAGAGCGCTTCGAGGAACAAGGTTGGGACTCGCTGAAGTCGAGTCCCTATTACGAATTGTTGAGGGAGTACAAAGACGTACTCCCGGAAGAGATTCCTGCGGAGCTTCCGCAGGATAAGGGCATTCAGCACGAGATTGATCTCGTGCCGGGCACGAAGTACTGTGTCACGCGGCAGTGGCCACTGCCGCGAGAGCAAGTGAAAGCGATCGACGACTTCTTTGAAAGTCGTCGTAAAGCAGGACAAGTGCGGGAATCAAAGTCCCCGCACAGTGCTCCGACGTTCTGTGTCAAGAAGCCACAGGGCGGATGGCGCATCGTTCATGCCTACAACAAGCTGAACGATGCGACGGTACCGGCGCAGACGCCGATACCGCGAAAAGATGTTATCATCGATTCGATGGCCGGGAGCACCGTTTACAGTGCTCTCGACTTGCGAGATGGATTTTATCAAATCCTAATGCGTGAGAGCGATATCCCTCTCACGGCAGTGAGCACGCCAAGCGGCATGCTCTGGGAATGGCTAGTAATGCCACAGGGGCTTAAGAACGCCCCTGCGACTTTCAACAGGTGCGTGACGCACTTGTTGCGCTCGGTGCGCGACTTCGCACCGAGCTACTTCGATGATGTATTCATCCACAGCCGGGCTGTGGACGGGAAGACCGACGTAGAGATGCACAGGGTGCATCTCCGGAAGCTACTTGAGCTTATGCGAAAGCATAAGCTCTACGCGAACCTGAAGAAGTGTATCTTCGGGGCGAGCGAGATACCCGTCCTCGGGTGTCTCGTAGGGAAGAATGGTGTTCGCCCTGACCCGGAAAAGGTCAGAGTGATCAATGAATGGCCAACGCCTTCAAGTGTCAAGGAACTGAGGCAGTTCCTTGGCTTGGCCACGTACTTGTGCAAGTACGTGGAGGATTATGCGGGCAAGATCCGCCCGCTGTCACAGCTTCTTAAGAAAGAAGCTGTGTGGAATTGGACACCCGATTGCCAAAAGGCATTCGATGCAGTCAAGCGGGGCTTGACTGAGGCGCCGATCTTGGCAGTGGCTGACCAAGATCGCCCATTTCACGTAGTGTGTGACGCATCCGATTTCGCGATCGGATGCGCGTTGATGCAGCACGATCACGAGGGCCGTGATCGTGTCGTCTACTACCAATCGCGTCAGCTGAAGCCAGCTGAGCGCAACTATCCGGTGCATGACAAGGAACTCCTTGCCATGAAGTATGCACTCGCAAAGTTCCGAGTGTACTTGCTTGGGAGTAGACCATTTGTGGTCTACACCGACCATGCTTCACTGCGCACCGCAGTGAAGTCGCCACACATTTCACAAAGAATGGCGAGATGGCTCTCATTCTTTGCGGAGTATAACTTCCGGGTCGAATACAAACCCGGAAGATTGAACGTGGTGGCCGACGCGTTATCACGTCGGCCGGACTATGCAGAAGCTGTTGACGTCAATGCCATTGACGCCATGCGATCGAGCAAACCCACATCATCTCTGTTGGATGATGTGAAGGCCGCGTACGCGCACGACGCGGACGCGAAGCTCTTGCTGGCCTATGGCACAGCGCCTTCTGACAAGTCCCGTCAGAAGCTGCCCAAGCACCTTCGAGCGCGTGCACACCGCTTTCGTGTGCACGACGGACTACTGCTTTACAATGCAGTCGACGACAACGCGGATCGCGTTGTCGTGCCAAATGACCATGACCTGCGACTCAGGATCATGTACGAGTATCATGATGCCCCGACTGCGGGACATCTCGGACGTGAGAAGACTTACGTCCTTCTCACGCGCGACTTCTACTGGCACCACCAGTATAAGTGGGTGCGCAAGTACATCCGTGCTTGCGAGGTATGCCAACGCGTAAAGCCTGCGCCATTCGCGCAGGCTCCACTGCAATCACTACCGACTCCGTCGGAGTGTTGGAAGTCCATGTCTTTGGACTTCATCTTTGGTCTTCCCCCGGACAGCGGAGGGAATACCGGTGTTGTGGTCTTCGTCGACCGCTTCAGCAAGATGGTACATCTTGCTGCGGTGCCGGCAGAAGTGACCGCGAAGCAGACGGCCCGTCTGTTCGTCGACATGGTGTTCAAACACCATGGCATGCCGACCGACATCGTGTCGGACAGAGACCCGCGCTTCACAGCGCACCTGTGGCAAGAAGTGTTTACACTTCTTGGGAGCCAGCTTTCCATGTCGACTGCGGATCATCCGCAGACGGACGGTCAAACCGAGCGCGTGAATCGCGTGCTCGTCGATATGTTGAAGAGCTACGCTCACTCGTTCCAATACTGGAGCGAGTGCTTATCGATGGCAGAGTTTGCCATCAATAACTCAGTGCATGCCTCGACCGGGCATACACCGTTCTACGTGAATGCCATGCGGCATCCACGTCTACCGAGTTTACTCGGAGTGATGGCTCCCACTTTAAGTGGGGGAGGATCTACGACTGCAATACAGCAGCCGCAGAAAACCGCTGACACTTGCACAGTGTCAGCTGCAACAATGGACAAACCACATGAGTCTGCGCAGGGCGCAGACTCCCCCAACAACAAGGCCAACGACCACGGGTCTGCGCAGGGCGCAGACACCGCAAAGAACCACGCAGAGGCCGGGCCTCTAGCGGAGAGCGAGCTGAATGACTTCAGCTCGGATGCAATCAGTTTCATCACCAAAAGACAAGCCGTGATTCGGTTTGTCCAAGACACAATAGCAGCTTCTGTTGATCAACAGAAGCTGAACGCAGACAATGCGGGCAGAGGCAACACAAATGAATTTAAAGTTGGTTCATTAGTTTTGTTAGCTACACAAAACCTGCCTAGACATGCAGTTTCGGATTTCGGAGCAAGCAAGCTTGCTCCGCGCTTCATCGGGCCGTTCACTGTGTTGGCACGGCACGGCAACGCATACACGCTAGACATACCGTCTAGCATGCGCCTCCATCCGACCTTTTACGTCGGACGGCTGAAGCCATACCTGCAGCACGAGCCATCTAGCTCGGCTGACCCGAAGCCTCGGCAGGAGCCGAGGCAGAAGCGGAGGACTTGGCCTCGGCGACGAGCAACCTCTCCTCCAGCGCGCGGACGCGCTGGAGCAACCCCTTCATCTGGGTCCCCAGCTCGACCTGGATATTCGAGGCGGTCTGCGAGACCGCCGCGACTTGGGCCTTCTGGTTCGCCAGCTCCTGTTTCAGGGCGGCGAACTCAGCGCCCTGCAGACGCTCCACGGCGGTCACCCGGTCGTGGAGAGGCGCATACTGATCAGCCCGGGGCTGATCATACCCGGGGCGTGTTCCCACCCCCGCCACCGCCGATCCGTGACGCCCGCGGCTCAACCCGCTGGATTGTTGAGCGGATTGTTGACCATAGTATCCCGAAAACGAACCCTCAAGGGGCTCGTTTTCGTATTCGTT OLD KEY: GCTGGATTGTTGAGCGGATTGTTGACCATAGTATC NEW KEY: AACGAACCCTCAAGGGGCTCGTTTTCGTATTCGTT ........ _A_ XX00XX00000XX000000000000000X00000000X0X00X0000000000X003X0X0X0X0000X000000 __104__ ........ _T_ 000000000X00000000X00XXXX00X0XX00XX00000000XXX00X00000X00000X000X0000000000 __104__ ........ _G_ 000X000000000XXXX000X00000X00000X00XX0X0XX0000000000000070X000000XXX0900X09 __104__ ........ _C_ 00X000XXX0X000000X0X00000X00000X00000000000000XX0XXXX00X000000X0000000XX090 __104__ ........ _N_ 000000000000000000000000000000000000000000000000000000000000000000000000000 __104__ ........ ALL OOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOwwwwwwwwwwwwwwwwwwwwwvvuttsrrqppoonkg __104__ ******** *** ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^**************************************** __104__ ######## CNS AACGAACCCTCAAGGGGCTCGTTTTCGTATTCGTTGGAGAGGATTTCCTCCCCATCgAGATACATGGGAgCCGcg __104__ ######## QLT XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX@XXXXXXXXXXXX+XXX++ __104__ >CONSENSUS__104__ Length: 4164 [gain: 40] ATGGCGTCGAGGTGACGAAGGCGTGTCAACTCCGGGAGTTGACGCTGCAAACAGTGCGGACGGTTGCAAACGTACCGCACTGACGCAATTTGCATGCTGTCGTGCAGCCGGGCTGCACGACGAAGCGCCATGCGATCAAGCCGGGCTTGATATCGCGCGCCCGCAGACAGGGTCTGCCGGCGAAGGGACACATTACCGTGCAGCCGGGCTGCACGAAGGAAAATGCGGTCAAGCCGGGCTTGATACCGCGCGCCCGCGGACAGGGTCCGCCGGCGAACGACTGTCCACGGCCGGGCCTGGACCAGAAGAACAACTGTGCGGAGCCGGGCTCCGCACAACAAGAAGACGGCGCAAGCGGAAAACGCTGCGCAAGTCTCGGTCCGGGACCGAGACGCAACAAGAGCAGTCTGCTGGGCAGACTGCGGCGGTGACGCCGAATGTCAAGACGCTAAGCGTCTTGACGCGCACCGATACTGGATTCCAGTATCGTGACATGGAACTCGCTAGTCCTCCGACGACGGCGTCGGAGTTGACTTCGCTTCCAGCCATGAGCTGGAAGCGCTTCACGCGCGACTTGCACGATGGACGCATCGAGCAAGTCTGCGTTCTTTCGGACAGCGAAAGAACGGAGAGCGAGAGCGAAGAGCTGAGGCAGCTCTTCATGGGAAGTACCACTGAGAGTGAAGACACTCTCAGTGCGAAGACGAAGCGAGAGCGCTTCGAGGAACAAGGTTGGGACTCGCTGAAGTCGAGTCCCTATTACGAATTGTTGAGGGAGTACAAAGACGTACTCCCGGAAGAGATTCCTGCGGAGCTTCCGCAGGATAAGGGCATTCAGCACGAGATTGATCTCGTGCCGGGCACGAAGTACTGTGTCACGCGGCAGTGGCCACTGCCGCGAGAGCAAGTGAAAGCGATCGACGACTTCTTTGAAAGTCGTCGTAAAGCAGGACAAGTGCGGGAATCAAAGTCCCCGCACAGTGCTCCGACGTTCTGTGTCAAGAAGCCACAGGGCGGATGGCGCATCGTTCATGCCTACAACAAGCTGAACGATGCGACGGTACCGGCGCAGACGCCGATACCGCGAAAAGATGTTATCATCGATTCGATGGCCGGGAGCACCGTTTACAGTGCTCTCGACTTGCGAGATGGATTTTATCAAATCCTAATGCGTGAGAGCGATATCCCTCTCACGGCAGTGAGCACGCCAAGCGGCATGCTCTGGGAATGGCTAGTAATGCCACAGGGGCTTAAGAACGCCCCTGCGACTTTCAACAGGTGCGTGACGCACTTGTTGCGCTCGGTGCGCGACTTCGCACCGAGCTACTTCGATGATGTATTCATCCACAGCCGGGCTGTGGACGGGAAGACCGACGTAGAGATGCACAGGGTGCATCTCCGGAAGCTACTTGAGCTTATGCGAAAGCATAAGCTCTACGCGAACCTGAAGAAGTGTATCTTCGGGGCGAGCGAGATACCCGTCCTCGGGTGTCTCGTAGGGAAGAATGGTGTTCGCCCTGACCCGGAAAAGGTCAGAGTGATCAATGAATGGCCAACGCCTTCAAGTGTCAAGGAACTGAGGCAGTTCCTTGGCTTGGCCACGTACTTGTGCAAGTACGTGGAGGATTATGCGGGCAAGATCCGCCCGCTGTCACAGCTTCTTAAGAAAGAAGCTGTGTGGAATTGGACACCCGATTGCCAAAAGGCATTCGATGCAGTCAAGCGGGGCTTGACTGAGGCGCCGATCTTGGCAGTGGCTGACCAAGATCGCCCATTTCACGTAGTGTGTGACGCATCCGATTTCGCGATCGGATGCGCGTTGATGCAGCACGATCACGAGGGCCGTGATCGTGTCGTCTACTACCAATCGCGTCAGCTGAAGCCAGCTGAGCGCAACTATCCGGTGCATGACAAGGAACTCCTTGCCATGAAGTATGCACTCGCAAAGTTCCGAGTGTACTTGCTTGGGAGTAGACCATTTGTGGTCTACACCGACCATGCTTCACTGCGCACCGCAGTGAAGTCGCCACACATTTCACAAAGAATGGCGAGATGGCTCTCATTCTTTGCGGAGTATAACTTCCGGGTCGAATACAAACCCGGAAGATTGAACGTGGTGGCCGACGCGTTATCACGTCGGCCGGACTATGCAGAAGCTGTTGACGTCAATGCCATTGACGCCATGCGATCGAGCAAACCCACATCATCTCTGTTGGATGATGTGAAGGCCGCGTACGCGCACGACGCGGACGCGAAGCTCTTGCTGGCCTATGGCACAGCGCCTTCTGACAAGTCCCGTCAGAAGCTGCCCAAGCACCTTCGAGCGCGTGCACACCGCTTTCGTGTGCACGACGGACTACTGCTTTACAATGCAGTCGACGACAACGCGGATCGCGTTGTCGTGCCAAATGACCATGACCTGCGACTCAGGATCATGTACGAGTATCATGATGCCCCGACTGCGGGACATCTCGGACGTGAGAAGACTTACGTCCTTCTCACGCGCGACTTCTACTGGCACCACCAGTATAAGTGGGTGCGCAAGTACATCCGTGCTTGCGAGGTATGCCAACGCGTAAAGCCTGCGCCATTCGCGCAGGCTCCACTGCAATCACTACCGACTCCGTCGGAGTGTTGGAAGTCCATGTCTTTGGACTTCATCTTTGGTCTTCCCCCGGACAGCGGAGGGAATACCGGTGTTGTGGTCTTCGTCGACCGCTTCAGCAAGATGGTACATCTTGCTGCGGTGCCGGCAGAAGTGACCGCGAAGCAGACGGCCCGTCTGTTCGTCGACATGGTGTTCAAACACCATGGCATGCCGACCGACATCGTGTCGGACAGAGACCCGCGCTTCACAGCGCACCTGTGGCAAGAAGTGTTTACACTTCTTGGGAGCCAGCTTTCCATGTCGACTGCGGATCATCCGCAGACGGACGGTCAAACCGAGCGCGTGAATCGCGTGCTCGTCGATATGTTGAAGAGCTACGCTCACTCGTTCCAATACTGGAGCGAGTGCTTATCGATGGCAGAGTTTGCCATCAATAACTCAGTGCATGCCTCGACCGGGCATACACCGTTCTACGTGAATGCCATGCGGCATCCACGTCTACCGAGTTTACTCGGAGTGATGGCTCCCACTTTAAGTGGGGGAGGATCTACGACTGCAATACAGCAGCCGCAGAAAACCGCTGACACTTGCACAGTGTCAGCTGCAACAATGGACAAACCACATGAGTCTGCGCAGGGCGCAGACTCCCCCAACAACAAGGCCAACGACCACGGGTCTGCGCAGGGCGCAGACACCGCAAAGAACCACGCAGAGGCCGGGCCTCTAGCGGAGAGCGAGCTGAATGACTTCAGCTCGGATGCAATCAGTTTCATCACCAAAAGACAAGCCGTGATTCGGTTTGTCCAAGACACAATAGCAGCTTCTGTTGATCAACAGAAGCTGAACGCAGACAATGCGGGCAGAGGCAACACAAATGAATTTAAAGTTGGTTCATTAGTTTTGTTAGCTACACAAAACCTGCCTAGACATGCAGTTTCGGATTTCGGAGCAAGCAAGCTTGCTCCGCGCTTCATCGGGCCGTTCACTGTGTTGGCACGGCACGGCAACGCATACACGCTAGACATACCGTCTAGCATGCGCCTCCATCCGACCTTTTACGTCGGACGGCTGAAGCCATACCTGCAGCACGAGCCATCTAGCTCGGCTGACCCGAAGCCTCGGCAGGAGCCGAGGCAGAAGCGGAGGACTTGGCCTCGGCGACGAGCAACCTCTCCTCCAGCGCGCGGACGCGCTGGAGCAACCCCTTCATCTGGGTCCCCAGCTCGACCTGGATATTCGAGGCGGTCTGCGAGACCGCCGCGACTTGGGCCTTCTGGTTCGCCAGCTCCTGTTTCAGGGCGGCGAACTCAGCGCCCTGCAGACGCTCCACGGCGGTCACCCGGTCGTGGAGAGGCGCATACTGATCAGCCCGGGGCTGATCATACCCGGGGCGTGTTCCCACCCCCGCCACCGCCGATCCGTGACGCCCGCGGCTCAACCCGCTGGATTGTTGAGCGGATTGTTGACCATAGTATCCCGAAAACGAACCCTCAAGGGGCTCGTTTTCGTATTCGTTGGAGAGGATTTCCTCCCCATCGAGATACATGGGAGCCGCG OLD KEY: AACGAACCCTCAAGGGGCTCGTTTTCGTATTCGTT NEW KEY: GGATTTCCTCCCCATCGAGATACATGGGAGCCGCG ........ _A_ 00X0000000000X000X0X0X0X0000X00000009X0000000000090090000000089X00000800000 __105__ ........ _T_ 000XXX00X00000X00000X000X000000000000000809X009000000008X000000090070000000 __105__ ........ _G_ XX00000000000000X0X000000XXX0X00X0XX100X1000900XX1XX10X10009X20009X2X1XXX1X __105__ ........ _C_ 000000XX0XXXX00X000000X0000000XX0X0000X00X00091000000X0009X0000000000000090 __105__ ........ _N_ 000000000000000000000000000000000000000000000000000000000000000000000000000 __105__ ........ ALL wwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwvvvvuutttsssrrqqpppoomkif __105__ ******** *** ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^**************************************** __105__ ######## CNS GGATTTCCTCCCCATCGAGATACATGGGAGCCGCGGaACGtCtTgctGGaGGaCGtTcCgGaaAtgGtGaGGGcG __105__ ######## QLT XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX+XXX+X+X+++XX+XX+XX+X+X+X++X++X@X+XXX+X __105__ >CONSENSUS__105__ Length: 4204 [gain: 40] ATGGCGTCGAGGTGACGAAGGCGTGTCAACTCCGGGAGTTGACGCTGCAAACAGTGCGGACGGTTGCAAACGTACCGCACTGACGCAATTTGCATGCTGTCGTGCAGCCGGGCTGCACGACGAAGCGCCATGCGATCAAGCCGGGCTTGATATCGCGCGCCCGCAGACAGGGTCTGCCGGCGAAGGGACACATTACCGTGCAGCCGGGCTGCACGAAGGAAAATGCGGTCAAGCCGGGCTTGATACCGCGCGCCCGCGGACAGGGTCCGCCGGCGAACGACTGTCCACGGCCGGGCCTGGACCAGAAGAACAACTGTGCGGAGCCGGGCTCCGCACAACAAGAAGACGGCGCAAGCGGAAAACGCTGCGCAAGTCTCGGTCCGGGACCGAGACGCAACAAGAGCAGTCTGCTGGGCAGACTGCGGCGGTGACGCCGAATGTCAAGACGCTAAGCGTCTTGACGCGCACCGATACTGGATTCCAGTATCGTGACATGGAACTCGCTAGTCCTCCGACGACGGCGTCGGAGTTGACTTCGCTTCCAGCCATGAGCTGGAAGCGCTTCACGCGCGACTTGCACGATGGACGCATCGAGCAAGTCTGCGTTCTTTCGGACAGCGAAAGAACGGAGAGCGAGAGCGAAGAGCTGAGGCAGCTCTTCATGGGAAGTACCACTGAGAGTGAAGACACTCTCAGTGCGAAGACGAAGCGAGAGCGCTTCGAGGAACAAGGTTGGGACTCGCTGAAGTCGAGTCCCTATTACGAATTGTTGAGGGAGTACAAAGACGTACTCCCGGAAGAGATTCCTGCGGAGCTTCCGCAGGATAAGGGCATTCAGCACGAGATTGATCTCGTGCCGGGCACGAAGTACTGTGTCACGCGGCAGTGGCCACTGCCGCGAGAGCAAGTGAAAGCGATCGACGACTTCTTTGAAAGTCGTCGTAAAGCAGGACAAGTGCGGGAATCAAAGTCCCCGCACAGTGCTCCGACGTTCTGTGTCAAGAAGCCACAGGGCGGATGGCGCATCGTTCATGCCTACAACAAGCTGAACGATGCGACGGTACCGGCGCAGACGCCGATACCGCGAAAAGATGTTATCATCGATTCGATGGCCGGGAGCACCGTTTACAGTGCTCTCGACTTGCGAGATGGATTTTATCAAATCCTAATGCGTGAGAGCGATATCCCTCTCACGGCAGTGAGCACGCCAAGCGGCATGCTCTGGGAATGGCTAGTAATGCCACAGGGGCTTAAGAACGCCCCTGCGACTTTCAACAGGTGCGTGACGCACTTGTTGCGCTCGGTGCGCGACTTCGCACCGAGCTACTTCGATGATGTATTCATCCACAGCCGGGCTGTGGACGGGAAGACCGACGTAGAGATGCACAGGGTGCATCTCCGGAAGCTACTTGAGCTTATGCGAAAGCATAAGCTCTACGCGAACCTGAAGAAGTGTATCTTCGGGGCGAGCGAGATACCCGTCCTCGGGTGTCTCGTAGGGAAGAATGGTGTTCGCCCTGACCCGGAAAAGGTCAGAGTGATCAATGAATGGCCAACGCCTTCAAGTGTCAAGGAACTGAGGCAGTTCCTTGGCTTGGCCACGTACTTGTGCAAGTACGTGGAGGATTATGCGGGCAAGATCCGCCCGCTGTCACAGCTTCTTAAGAAAGAAGCTGTGTGGAATTGGACACCCGATTGCCAAAAGGCATTCGATGCAGTCAAGCGGGGCTTGACTGAGGCGCCGATCTTGGCAGTGGCTGACCAAGATCGCCCATTTCACGTAGTGTGTGACGCATCCGATTTCGCGATCGGATGCGCGTTGATGCAGCACGATCACGAGGGCCGTGATCGTGTCGTCTACTACCAATCGCGTCAGCTGAAGCCAGCTGAGCGCAACTATCCGGTGCATGACAAGGAACTCCTTGCCATGAAGTATGCACTCGCAAAGTTCCGAGTGTACTTGCTTGGGAGTAGACCATTTGTGGTCTACACCGACCATGCTTCACTGCGCACCGCAGTGAAGTCGCCACACATTTCACAAAGAATGGCGAGATGGCTCTCATTCTTTGCGGAGTATAACTTCCGGGTCGAATACAAACCCGGAAGATTGAACGTGGTGGCCGACGCGTTATCACGTCGGCCGGACTATGCAGAAGCTGTTGACGTCAATGCCATTGACGCCATGCGATCGAGCAAACCCACATCATCTCTGTTGGATGATGTGAAGGCCGCGTACGCGCACGACGCGGACGCGAAGCTCTTGCTGGCCTATGGCACAGCGCCTTCTGACAAGTCCCGTCAGAAGCTGCCCAAGCACCTTCGAGCGCGTGCACACCGCTTTCGTGTGCACGACGGACTACTGCTTTACAATGCAGTCGACGACAACGCGGATCGCGTTGTCGTGCCAAATGACCATGACCTGCGACTCAGGATCATGTACGAGTATCATGATGCCCCGACTGCGGGACATCTCGGACGTGAGAAGACTTACGTCCTTCTCACGCGCGACTTCTACTGGCACCACCAGTATAAGTGGGTGCGCAAGTACATCCGTGCTTGCGAGGTATGCCAACGCGTAAAGCCTGCGCCATTCGCGCAGGCTCCACTGCAATCACTACCGACTCCGTCGGAGTGTTGGAAGTCCATGTCTTTGGACTTCATCTTTGGTCTTCCCCCGGACAGCGGAGGGAATACCGGTGTTGTGGTCTTCGTCGACCGCTTCAGCAAGATGGTACATCTTGCTGCGGTGCCGGCAGAAGTGACCGCGAAGCAGACGGCCCGTCTGTTCGTCGACATGGTGTTCAAACACCATGGCATGCCGACCGACATCGTGTCGGACAGAGACCCGCGCTTCACAGCGCACCTGTGGCAAGAAGTGTTTACACTTCTTGGGAGCCAGCTTTCCATGTCGACTGCGGATCATCCGCAGACGGACGGTCAAACCGAGCGCGTGAATCGCGTGCTCGTCGATATGTTGAAGAGCTACGCTCACTCGTTCCAATACTGGAGCGAGTGCTTATCGATGGCAGAGTTTGCCATCAATAACTCAGTGCATGCCTCGACCGGGCATACACCGTTCTACGTGAATGCCATGCGGCATCCACGTCTACCGAGTTTACTCGGAGTGATGGCTCCCACTTTAAGTGGGGGAGGATCTACGACTGCAATACAGCAGCCGCAGAAAACCGCTGACACTTGCACAGTGTCAGCTGCAACAATGGACAAACCACATGAGTCTGCGCAGGGCGCAGACTCCCCCAACAACAAGGCCAACGACCACGGGTCTGCGCAGGGCGCAGACACCGCAAAGAACCACGCAGAGGCCGGGCCTCTAGCGGAGAGCGAGCTGAATGACTTCAGCTCGGATGCAATCAGTTTCATCACCAAAAGACAAGCCGTGATTCGGTTTGTCCAAGACACAATAGCAGCTTCTGTTGATCAACAGAAGCTGAACGCAGACAATGCGGGCAGAGGCAACACAAATGAATTTAAAGTTGGTTCATTAGTTTTGTTAGCTACACAAAACCTGCCTAGACATGCAGTTTCGGATTTCGGAGCAAGCAAGCTTGCTCCGCGCTTCATCGGGCCGTTCACTGTGTTGGCACGGCACGGCAACGCATACACGCTAGACATACCGTCTAGCATGCGCCTCCATCCGACCTTTTACGTCGGACGGCTGAAGCCATACCTGCAGCACGAGCCATCTAGCTCGGCTGACCCGAAGCCTCGGCAGGAGCCGAGGCAGAAGCGGAGGACTTGGCCTCGGCGACGAGCAACCTCTCCTCCAGCGCGCGGACGCGCTGGAGCAACCCCTTCATCTGGGTCCCCAGCTCGACCTGGATATTCGAGGCGGTCTGCGAGACCGCCGCGACTTGGGCCTTCTGGTTCGCCAGCTCCTGTTTCAGGGCGGCGAACTCAGCGCCCTGCAGACGCTCCACGGCGGTCACCCGGTCGTGGAGAGGCGCATACTGATCAGCCCGGGGCTGATCATACCCGGGGCGTGTTCCCACCCCCGCCACCGCCGATCCGTGACGCCCGCGGCTCAACCCGCTGGATTGTTGAGCGGATTGTTGACCATAGTATCCCGAAAACGAACCCTCAAGGGGCTCGTTTTCGTATTCGTTGGAGAGGATTTCCTCCCCATCGAGATACATGGGAGCCGCGGAACGTCTTGCTGGAGGACGTTCCGGAAATGGTGAGGGCG OLD KEY: GGATTTCCTCCCCATCGAGATACATGGGAGCCGCG NEW KEY: TCTTGCTGGAGGACGTTCCGGAAATGGTGAGGGCG ........ _A_ 000000000X00X00000000XXX00000X000000X00X40X00X00X00010000030X0000XX00X72800 __106__ ........ _T_ X0XX00X00000000XX0000000X00X0000000X00000000000X000000X00200000000009003000 __106__ ........ _G_ 0000X00XX0XX00X0000XX0000XX0X0XXX0X000X05X0X00X000X0900XX0700X09X00X003020X __106__ ........ _C_ 0X000X0000000X000XX00000000000000X000X000000X0000X0X0X00080X00X0000000050X0 __106__ ........ _N_ 000000000000000000000000000000000000000000000000000000000000000000000000000 __106__ ........ ALL wwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwvvuuuutttssssrrrrrqqpponli __106__ ******** *** ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^**************************************** __106__ ######## CNS TCTTGCTGGAGGACGTTCCGGAAATGGTGAGGGCGTACGAgGAGCAGTACGCgCTGGcgCAGCgGAAGtAacaCG __106__ ######## QLT XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX?XXXXXXXXXXX+XXXX+@XXXX+XXXX+X@?+XX __106__ >CONSENSUS__106__ Length: 4244 [gain: 40] ATGGCGTCGAGGTGACGAAGGCGTGTCAACTCCGGGAGTTGACGCTGCAAACAGTGCGGACGGTTGCAAACGTACCGCACTGACGCAATTTGCATGCTGTCGTGCAGCCGGGCTGCACGACGAAGCGCCATGCGATCAAGCCGGGCTTGATATCGCGCGCCCGCAGACAGGGTCTGCCGGCGAAGGGACACATTACCGTGCAGCCGGGCTGCACGAAGGAAAATGCGGTCAAGCCGGGCTTGATACCGCGCGCCCGCGGACAGGGTCCGCCGGCGAACGACTGTCCACGGCCGGGCCTGGACCAGAAGAACAACTGTGCGGAGCCGGGCTCCGCACAACAAGAAGACGGCGCAAGCGGAAAACGCTGCGCAAGTCTCGGTCCGGGACCGAGACGCAACAAGAGCAGTCTGCTGGGCAGACTGCGGCGGTGACGCCGAATGTCAAGACGCTAAGCGTCTTGACGCGCACCGATACTGGATTCCAGTATCGTGACATGGAACTCGCTAGTCCTCCGACGACGGCGTCGGAGTTGACTTCGCTTCCAGCCATGAGCTGGAAGCGCTTCACGCGCGACTTGCACGATGGACGCATCGAGCAAGTCTGCGTTCTTTCGGACAGCGAAAGAACGGAGAGCGAGAGCGAAGAGCTGAGGCAGCTCTTCATGGGAAGTACCACTGAGAGTGAAGACACTCTCAGTGCGAAGACGAAGCGAGAGCGCTTCGAGGAACAAGGTTGGGACTCGCTGAAGTCGAGTCCCTATTACGAATTGTTGAGGGAGTACAAAGACGTACTCCCGGAAGAGATTCCTGCGGAGCTTCCGCAGGATAAGGGCATTCAGCACGAGATTGATCTCGTGCCGGGCACGAAGTACTGTGTCACGCGGCAGTGGCCACTGCCGCGAGAGCAAGTGAAAGCGATCGACGACTTCTTTGAAAGTCGTCGTAAAGCAGGACAAGTGCGGGAATCAAAGTCCCCGCACAGTGCTCCGACGTTCTGTGTCAAGAAGCCACAGGGCGGATGGCGCATCGTTCATGCCTACAACAAGCTGAACGATGCGACGGTACCGGCGCAGACGCCGATACCGCGAAAAGATGTTATCATCGATTCGATGGCCGGGAGCACCGTTTACAGTGCTCTCGACTTGCGAGATGGATTTTATCAAATCCTAATGCGTGAGAGCGATATCCCTCTCACGGCAGTGAGCACGCCAAGCGGCATGCTCTGGGAATGGCTAGTAATGCCACAGGGGCTTAAGAACGCCCCTGCGACTTTCAACAGGTGCGTGACGCACTTGTTGCGCTCGGTGCGCGACTTCGCACCGAGCTACTTCGATGATGTATTCATCCACAGCCGGGCTGTGGACGGGAAGACCGACGTAGAGATGCACAGGGTGCATCTCCGGAAGCTACTTGAGCTTATGCGAAAGCATAAGCTCTACGCGAACCTGAAGAAGTGTATCTTCGGGGCGAGCGAGATACCCGTCCTCGGGTGTCTCGTAGGGAAGAATGGTGTTCGCCCTGACCCGGAAAAGGTCAGAGTGATCAATGAATGGCCAACGCCTTCAAGTGTCAAGGAACTGAGGCAGTTCCTTGGCTTGGCCACGTACTTGTGCAAGTACGTGGAGGATTATGCGGGCAAGATCCGCCCGCTGTCACAGCTTCTTAAGAAAGAAGCTGTGTGGAATTGGACACCCGATTGCCAAAAGGCATTCGATGCAGTCAAGCGGGGCTTGACTGAGGCGCCGATCTTGGCAGTGGCTGACCAAGATCGCCCATTTCACGTAGTGTGTGACGCATCCGATTTCGCGATCGGATGCGCGTTGATGCAGCACGATCACGAGGGCCGTGATCGTGTCGTCTACTACCAATCGCGTCAGCTGAAGCCAGCTGAGCGCAACTATCCGGTGCATGACAAGGAACTCCTTGCCATGAAGTATGCACTCGCAAAGTTCCGAGTGTACTTGCTTGGGAGTAGACCATTTGTGGTCTACACCGACCATGCTTCACTGCGCACCGCAGTGAAGTCGCCACACATTTCACAAAGAATGGCGAGATGGCTCTCATTCTTTGCGGAGTATAACTTCCGGGTCGAATACAAACCCGGAAGATTGAACGTGGTGGCCGACGCGTTATCACGTCGGCCGGACTATGCAGAAGCTGTTGACGTCAATGCCATTGACGCCATGCGATCGAGCAAACCCACATCATCTCTGTTGGATGATGTGAAGGCCGCGTACGCGCACGACGCGGACGCGAAGCTCTTGCTGGCCTATGGCACAGCGCCTTCTGACAAGTCCCGTCAGAAGCTGCCCAAGCACCTTCGAGCGCGTGCACACCGCTTTCGTGTGCACGACGGACTACTGCTTTACAATGCAGTCGACGACAACGCGGATCGCGTTGTCGTGCCAAATGACCATGACCTGCGACTCAGGATCATGTACGAGTATCATGATGCCCCGACTGCGGGACATCTCGGACGTGAGAAGACTTACGTCCTTCTCACGCGCGACTTCTACTGGCACCACCAGTATAAGTGGGTGCGCAAGTACATCCGTGCTTGCGAGGTATGCCAACGCGTAAAGCCTGCGCCATTCGCGCAGGCTCCACTGCAATCACTACCGACTCCGTCGGAGTGTTGGAAGTCCATGTCTTTGGACTTCATCTTTGGTCTTCCCCCGGACAGCGGAGGGAATACCGGTGTTGTGGTCTTCGTCGACCGCTTCAGCAAGATGGTACATCTTGCTGCGGTGCCGGCAGAAGTGACCGCGAAGCAGACGGCCCGTCTGTTCGTCGACATGGTGTTCAAACACCATGGCATGCCGACCGACATCGTGTCGGACAGAGACCCGCGCTTCACAGCGCACCTGTGGCAAGAAGTGTTTACACTTCTTGGGAGCCAGCTTTCCATGTCGACTGCGGATCATCCGCAGACGGACGGTCAAACCGAGCGCGTGAATCGCGTGCTCGTCGATATGTTGAAGAGCTACGCTCACTCGTTCCAATACTGGAGCGAGTGCTTATCGATGGCAGAGTTTGCCATCAATAACTCAGTGCATGCCTCGACCGGGCATACACCGTTCTACGTGAATGCCATGCGGCATCCACGTCTACCGAGTTTACTCGGAGTGATGGCTCCCACTTTAAGTGGGGGAGGATCTACGACTGCAATACAGCAGCCGCAGAAAACCGCTGACACTTGCACAGTGTCAGCTGCAACAATGGACAAACCACATGAGTCTGCGCAGGGCGCAGACTCCCCCAACAACAAGGCCAACGACCACGGGTCTGCGCAGGGCGCAGACACCGCAAAGAACCACGCAGAGGCCGGGCCTCTAGCGGAGAGCGAGCTGAATGACTTCAGCTCGGATGCAATCAGTTTCATCACCAAAAGACAAGCCGTGATTCGGTTTGTCCAAGACACAATAGCAGCTTCTGTTGATCAACAGAAGCTGAACGCAGACAATGCGGGCAGAGGCAACACAAATGAATTTAAAGTTGGTTCATTAGTTTTGTTAGCTACACAAAACCTGCCTAGACATGCAGTTTCGGATTTCGGAGCAAGCAAGCTTGCTCCGCGCTTCATCGGGCCGTTCACTGTGTTGGCACGGCACGGCAACGCATACACGCTAGACATACCGTCTAGCATGCGCCTCCATCCGACCTTTTACGTCGGACGGCTGAAGCCATACCTGCAGCACGAGCCATCTAGCTCGGCTGACCCGAAGCCTCGGCAGGAGCCGAGGCAGAAGCGGAGGACTTGGCCTCGGCGACGAGCAACCTCTCCTCCAGCGCGCGGACGCGCTGGAGCAACCCCTTCATCTGGGTCCCCAGCTCGACCTGGATATTCGAGGCGGTCTGCGAGACCGCCGCGACTTGGGCCTTCTGGTTCGCCAGCTCCTGTTTCAGGGCGGCGAACTCAGCGCCCTGCAGACGCTCCACGGCGGTCACCCGGTCGTGGAGAGGCGCATACTGATCAGCCCGGGGCTGATCATACCCGGGGCGTGTTCCCACCCCCGCCACCGCCGATCCGTGACGCCCGCGGCTCAACCCGCTGGATTGTTGAGCGGATTGTTGACCATAGTATCCCGAAAACGAACCCTCAAGGGGCTCGTTTTCGTATTCGTTGGAGAGGATTTCCTCCCCATCGAGATACATGGGAGCCGCGGAACGTCTTGCTGGAGGACGTTCCGGAAATGGTGAGGGCGTACGAGGAGCAGTACGCGCTGGCGCAGCGGAAGTAACACG OLD KEY: TCTTGCTGGAGGACGTTCCGGAAATGGTGAGGGCG NEW KEY: GGAGCAGTACGCGCTGGCGCAGCGGAAGTAACACG ........ _A_ 00X00X00X00000000000X0000XX00XX0X00X00000000900X00000X0000000XX00000X000100 __107__ ........ _T_ 0000000X000000X0000000000000X00000000000X0000X10X00090000000000001X0000X00X __107__ ........ _G_ XX0X00X000X0X00XX0X00X0XX00X000000X0X0X00X09100000X000X0X000X000000000X0900 __107__ ........ _C_ 0000X0000X0X0X000X0X00X00000000X0X000X0X00X100900X0X100X0XXX000XX90X0X000X0 __107__ ........ _N_ 000000000000000000000000000000000000000000000000000000000000000000000000000 __107__ ........ ALL kkkkkkkkkkkkkkkkkkkkkkkkkkkkkkkkkkkjjjjjjjiiiiihgggffffffeeedddddddcccbbaaa __107__ ******** *** ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^**************************************** __107__ ######## CNS GGAGCAGTACGCGCTGGCGCAGCGGAAGTAACACGAGCGCTGCgaTcATCGCtAGCGCCCGAACCcTCACGTgCT __107__ ######## QLT XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX++X+XXXXX+XXXXXXXXXXXX+XXXXXX+XX __107__ >CONSENSUS__107__ Length: 4284 [gain: 40] ATGGCGTCGAGGTGACGAAGGCGTGTCAACTCCGGGAGTTGACGCTGCAAACAGTGCGGACGGTTGCAAACGTACCGCACTGACGCAATTTGCATGCTGTCGTGCAGCCGGGCTGCACGACGAAGCGCCATGCGATCAAGCCGGGCTTGATATCGCGCGCCCGCAGACAGGGTCTGCCGGCGAAGGGACACATTACCGTGCAGCCGGGCTGCACGAAGGAAAATGCGGTCAAGCCGGGCTTGATACCGCGCGCCCGCGGACAGGGTCCGCCGGCGAACGACTGTCCACGGCCGGGCCTGGACCAGAAGAACAACTGTGCGGAGCCGGGCTCCGCACAACAAGAAGACGGCGCAAGCGGAAAACGCTGCGCAAGTCTCGGTCCGGGACCGAGACGCAACAAGAGCAGTCTGCTGGGCAGACTGCGGCGGTGACGCCGAATGTCAAGACGCTAAGCGTCTTGACGCGCACCGATACTGGATTCCAGTATCGTGACATGGAACTCGCTAGTCCTCCGACGACGGCGTCGGAGTTGACTTCGCTTCCAGCCATGAGCTGGAAGCGCTTCACGCGCGACTTGCACGATGGACGCATCGAGCAAGTCTGCGTTCTTTCGGACAGCGAAAGAACGGAGAGCGAGAGCGAAGAGCTGAGGCAGCTCTTCATGGGAAGTACCACTGAGAGTGAAGACACTCTCAGTGCGAAGACGAAGCGAGAGCGCTTCGAGGAACAAGGTTGGGACTCGCTGAAGTCGAGTCCCTATTACGAATTGTTGAGGGAGTACAAAGACGTACTCCCGGAAGAGATTCCTGCGGAGCTTCCGCAGGATAAGGGCATTCAGCACGAGATTGATCTCGTGCCGGGCACGAAGTACTGTGTCACGCGGCAGTGGCCACTGCCGCGAGAGCAAGTGAAAGCGATCGACGACTTCTTTGAAAGTCGTCGTAAAGCAGGACAAGTGCGGGAATCAAAGTCCCCGCACAGTGCTCCGACGTTCTGTGTCAAGAAGCCACAGGGCGGATGGCGCATCGTTCATGCCTACAACAAGCTGAACGATGCGACGGTACCGGCGCAGACGCCGATACCGCGAAAAGATGTTATCATCGATTCGATGGCCGGGAGCACCGTTTACAGTGCTCTCGACTTGCGAGATGGATTTTATCAAATCCTAATGCGTGAGAGCGATATCCCTCTCACGGCAGTGAGCACGCCAAGCGGCATGCTCTGGGAATGGCTAGTAATGCCACAGGGGCTTAAGAACGCCCCTGCGACTTTCAACAGGTGCGTGACGCACTTGTTGCGCTCGGTGCGCGACTTCGCACCGAGCTACTTCGATGATGTATTCATCCACAGCCGGGCTGTGGACGGGAAGACCGACGTAGAGATGCACAGGGTGCATCTCCGGAAGCTACTTGAGCTTATGCGAAAGCATAAGCTCTACGCGAACCTGAAGAAGTGTATCTTCGGGGCGAGCGAGATACCCGTCCTCGGGTGTCTCGTAGGGAAGAATGGTGTTCGCCCTGACCCGGAAAAGGTCAGAGTGATCAATGAATGGCCAACGCCTTCAAGTGTCAAGGAACTGAGGCAGTTCCTTGGCTTGGCCACGTACTTGTGCAAGTACGTGGAGGATTATGCGGGCAAGATCCGCCCGCTGTCACAGCTTCTTAAGAAAGAAGCTGTGTGGAATTGGACACCCGATTGCCAAAAGGCATTCGATGCAGTCAAGCGGGGCTTGACTGAGGCGCCGATCTTGGCAGTGGCTGACCAAGATCGCCCATTTCACGTAGTGTGTGACGCATCCGATTTCGCGATCGGATGCGCGTTGATGCAGCACGATCACGAGGGCCGTGATCGTGTCGTCTACTACCAATCGCGTCAGCTGAAGCCAGCTGAGCGCAACTATCCGGTGCATGACAAGGAACTCCTTGCCATGAAGTATGCACTCGCAAAGTTCCGAGTGTACTTGCTTGGGAGTAGACCATTTGTGGTCTACACCGACCATGCTTCACTGCGCACCGCAGTGAAGTCGCCACACATTTCACAAAGAATGGCGAGATGGCTCTCATTCTTTGCGGAGTATAACTTCCGGGTCGAATACAAACCCGGAAGATTGAACGTGGTGGCCGACGCGTTATCACGTCGGCCGGACTATGCAGAAGCTGTTGACGTCAATGCCATTGACGCCATGCGATCGAGCAAACCCACATCATCTCTGTTGGATGATGTGAAGGCCGCGTACGCGCACGACGCGGACGCGAAGCTCTTGCTGGCCTATGGCACAGCGCCTTCTGACAAGTCCCGTCAGAAGCTGCCCAAGCACCTTCGAGCGCGTGCACACCGCTTTCGTGTGCACGACGGACTACTGCTTTACAATGCAGTCGACGACAACGCGGATCGCGTTGTCGTGCCAAATGACCATGACCTGCGACTCAGGATCATGTACGAGTATCATGATGCCCCGACTGCGGGACATCTCGGACGTGAGAAGACTTACGTCCTTCTCACGCGCGACTTCTACTGGCACCACCAGTATAAGTGGGTGCGCAAGTACATCCGTGCTTGCGAGGTATGCCAACGCGTAAAGCCTGCGCCATTCGCGCAGGCTCCACTGCAATCACTACCGACTCCGTCGGAGTGTTGGAAGTCCATGTCTTTGGACTTCATCTTTGGTCTTCCCCCGGACAGCGGAGGGAATACCGGTGTTGTGGTCTTCGTCGACCGCTTCAGCAAGATGGTACATCTTGCTGCGGTGCCGGCAGAAGTGACCGCGAAGCAGACGGCCCGTCTGTTCGTCGACATGGTGTTCAAACACCATGGCATGCCGACCGACATCGTGTCGGACAGAGACCCGCGCTTCACAGCGCACCTGTGGCAAGAAGTGTTTACACTTCTTGGGAGCCAGCTTTCCATGTCGACTGCGGATCATCCGCAGACGGACGGTCAAACCGAGCGCGTGAATCGCGTGCTCGTCGATATGTTGAAGAGCTACGCTCACTCGTTCCAATACTGGAGCGAGTGCTTATCGATGGCAGAGTTTGCCATCAATAACTCAGTGCATGCCTCGACCGGGCATACACCGTTCTACGTGAATGCCATGCGGCATCCACGTCTACCGAGTTTACTCGGAGTGATGGCTCCCACTTTAAGTGGGGGAGGATCTACGACTGCAATACAGCAGCCGCAGAAAACCGCTGACACTTGCACAGTGTCAGCTGCAACAATGGACAAACCACATGAGTCTGCGCAGGGCGCAGACTCCCCCAACAACAAGGCCAACGACCACGGGTCTGCGCAGGGCGCAGACACCGCAAAGAACCACGCAGAGGCCGGGCCTCTAGCGGAGAGCGAGCTGAATGACTTCAGCTCGGATGCAATCAGTTTCATCACCAAAAGACAAGCCGTGATTCGGTTTGTCCAAGACACAATAGCAGCTTCTGTTGATCAACAGAAGCTGAACGCAGACAATGCGGGCAGAGGCAACACAAATGAATTTAAAGTTGGTTCATTAGTTTTGTTAGCTACACAAAACCTGCCTAGACATGCAGTTTCGGATTTCGGAGCAAGCAAGCTTGCTCCGCGCTTCATCGGGCCGTTCACTGTGTTGGCACGGCACGGCAACGCATACACGCTAGACATACCGTCTAGCATGCGCCTCCATCCGACCTTTTACGTCGGACGGCTGAAGCCATACCTGCAGCACGAGCCATCTAGCTCGGCTGACCCGAAGCCTCGGCAGGAGCCGAGGCAGAAGCGGAGGACTTGGCCTCGGCGACGAGCAACCTCTCCTCCAGCGCGCGGACGCGCTGGAGCAACCCCTTCATCTGGGTCCCCAGCTCGACCTGGATATTCGAGGCGGTCTGCGAGACCGCCGCGACTTGGGCCTTCTGGTTCGCCAGCTCCTGTTTCAGGGCGGCGAACTCAGCGCCCTGCAGACGCTCCACGGCGGTCACCCGGTCGTGGAGAGGCGCATACTGATCAGCCCGGGGCTGATCATACCCGGGGCGTGTTCCCACCCCCGCCACCGCCGATCCGTGACGCCCGCGGCTCAACCCGCTGGATTGTTGAGCGGATTGTTGACCATAGTATCCCGAAAACGAACCCTCAAGGGGCTCGTTTTCGTATTCGTTGGAGAGGATTTCCTCCCCATCGAGATACATGGGAGCCGCGGAACGTCTTGCTGGAGGACGTTCCGGAAATGGTGAGGGCGTACGAGGAGCAGTACGCGCTGGCGCAGCGGAAGTAACACGAGCGCTGCGATCATCGCTAGCGCCCGAACCCTCACGTGCT OLD KEY: GGAGCAGTACGCGCTGGCGCAGCGGAAGTAACACG NEW KEY: TGCGATCATCGCTAGCGCCCGAACCCTCACGTGCT ........ _A_ 0000X00X00000X0000000XX00000X000000XX0XX000X00X000X00000000X0X000000000X0X0 __108__ ........ _T_ X0000X00X000X0000000000000X0000X00X000001XX0000000000X0XXX00000X0X000000000 __108__ ........ _G_ 0X0X000000X000X0X000X000000000X0X0000X000000X000XX0X000000X0X000000XXX00000 __108__ ........ _C_ 00X000X00X0X000X0XXX000XXX0X0X000X00000090000X0X0000X0X0000000X0X0X000X0X0X __108__ ........ _N_ 000000000000000000000000000000000000000000000000000000000000000000000000000 __108__ ........ ALL wwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwvvvvuuutttttssrrqqqpppooonljihge __108__ ******** *** ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^**************************************** __108__ ######## CNS TGCGATCATCGCTAGCGCCCGAACCCTCACGTGCTAAGAAcTTAGCACGGAGCTCTTTGAGACTCTCGGGCACAC __108__ ######## QLT XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX+XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX __108__ >CONSENSUS__108__ Length: 4324 [gain: 40] ATGGCGTCGAGGTGACGAAGGCGTGTCAACTCCGGGAGTTGACGCTGCAAACAGTGCGGACGGTTGCAAACGTACCGCACTGACGCAATTTGCATGCTGTCGTGCAGCCGGGCTGCACGACGAAGCGCCATGCGATCAAGCCGGGCTTGATATCGCGCGCCCGCAGACAGGGTCTGCCGGCGAAGGGACACATTACCGTGCAGCCGGGCTGCACGAAGGAAAATGCGGTCAAGCCGGGCTTGATACCGCGCGCCCGCGGACAGGGTCCGCCGGCGAACGACTGTCCACGGCCGGGCCTGGACCAGAAGAACAACTGTGCGGAGCCGGGCTCCGCACAACAAGAAGACGGCGCAAGCGGAAAACGCTGCGCAAGTCTCGGTCCGGGACCGAGACGCAACAAGAGCAGTCTGCTGGGCAGACTGCGGCGGTGACGCCGAATGTCAAGACGCTAAGCGTCTTGACGCGCACCGATACTGGATTCCAGTATCGTGACATGGAACTCGCTAGTCCTCCGACGACGGCGTCGGAGTTGACTTCGCTTCCAGCCATGAGCTGGAAGCGCTTCACGCGCGACTTGCACGATGGACGCATCGAGCAAGTCTGCGTTCTTTCGGACAGCGAAAGAACGGAGAGCGAGAGCGAAGAGCTGAGGCAGCTCTTCATGGGAAGTACCACTGAGAGTGAAGACACTCTCAGTGCGAAGACGAAGCGAGAGCGCTTCGAGGAACAAGGTTGGGACTCGCTGAAGTCGAGTCCCTATTACGAATTGTTGAGGGAGTACAAAGACGTACTCCCGGAAGAGATTCCTGCGGAGCTTCCGCAGGATAAGGGCATTCAGCACGAGATTGATCTCGTGCCGGGCACGAAGTACTGTGTCACGCGGCAGTGGCCACTGCCGCGAGAGCAAGTGAAAGCGATCGACGACTTCTTTGAAAGTCGTCGTAAAGCAGGACAAGTGCGGGAATCAAAGTCCCCGCACAGTGCTCCGACGTTCTGTGTCAAGAAGCCACAGGGCGGATGGCGCATCGTTCATGCCTACAACAAGCTGAACGATGCGACGGTACCGGCGCAGACGCCGATACCGCGAAAAGATGTTATCATCGATTCGATGGCCGGGAGCACCGTTTACAGTGCTCTCGACTTGCGAGATGGATTTTATCAAATCCTAATGCGTGAGAGCGATATCCCTCTCACGGCAGTGAGCACGCCAAGCGGCATGCTCTGGGAATGGCTAGTAATGCCACAGGGGCTTAAGAACGCCCCTGCGACTTTCAACAGGTGCGTGACGCACTTGTTGCGCTCGGTGCGCGACTTCGCACCGAGCTACTTCGATGATGTATTCATCCACAGCCGGGCTGTGGACGGGAAGACCGACGTAGAGATGCACAGGGTGCATCTCCGGAAGCTACTTGAGCTTATGCGAAAGCATAAGCTCTACGCGAACCTGAAGAAGTGTATCTTCGGGGCGAGCGAGATACCCGTCCTCGGGTGTCTCGTAGGGAAGAATGGTGTTCGCCCTGACCCGGAAAAGGTCAGAGTGATCAATGAATGGCCAACGCCTTCAAGTGTCAAGGAACTGAGGCAGTTCCTTGGCTTGGCCACGTACTTGTGCAAGTACGTGGAGGATTATGCGGGCAAGATCCGCCCGCTGTCACAGCTTCTTAAGAAAGAAGCTGTGTGGAATTGGACACCCGATTGCCAAAAGGCATTCGATGCAGTCAAGCGGGGCTTGACTGAGGCGCCGATCTTGGCAGTGGCTGACCAAGATCGCCCATTTCACGTAGTGTGTGACGCATCCGATTTCGCGATCGGATGCGCGTTGATGCAGCACGATCACGAGGGCCGTGATCGTGTCGTCTACTACCAATCGCGTCAGCTGAAGCCAGCTGAGCGCAACTATCCGGTGCATGACAAGGAACTCCTTGCCATGAAGTATGCACTCGCAAAGTTCCGAGTGTACTTGCTTGGGAGTAGACCATTTGTGGTCTACACCGACCATGCTTCACTGCGCACCGCAGTGAAGTCGCCACACATTTCACAAAGAATGGCGAGATGGCTCTCATTCTTTGCGGAGTATAACTTCCGGGTCGAATACAAACCCGGAAGATTGAACGTGGTGGCCGACGCGTTATCACGTCGGCCGGACTATGCAGAAGCTGTTGACGTCAATGCCATTGACGCCATGCGATCGAGCAAACCCACATCATCTCTGTTGGATGATGTGAAGGCCGCGTACGCGCACGACGCGGACGCGAAGCTCTTGCTGGCCTATGGCACAGCGCCTTCTGACAAGTCCCGTCAGAAGCTGCCCAAGCACCTTCGAGCGCGTGCACACCGCTTTCGTGTGCACGACGGACTACTGCTTTACAATGCAGTCGACGACAACGCGGATCGCGTTGTCGTGCCAAATGACCATGACCTGCGACTCAGGATCATGTACGAGTATCATGATGCCCCGACTGCGGGACATCTCGGACGTGAGAAGACTTACGTCCTTCTCACGCGCGACTTCTACTGGCACCACCAGTATAAGTGGGTGCGCAAGTACATCCGTGCTTGCGAGGTATGCCAACGCGTAAAGCCTGCGCCATTCGCGCAGGCTCCACTGCAATCACTACCGACTCCGTCGGAGTGTTGGAAGTCCATGTCTTTGGACTTCATCTTTGGTCTTCCCCCGGACAGCGGAGGGAATACCGGTGTTGTGGTCTTCGTCGACCGCTTCAGCAAGATGGTACATCTTGCTGCGGTGCCGGCAGAAGTGACCGCGAAGCAGACGGCCCGTCTGTTCGTCGACATGGTGTTCAAACACCATGGCATGCCGACCGACATCGTGTCGGACAGAGACCCGCGCTTCACAGCGCACCTGTGGCAAGAAGTGTTTACACTTCTTGGGAGCCAGCTTTCCATGTCGACTGCGGATCATCCGCAGACGGACGGTCAAACCGAGCGCGTGAATCGCGTGCTCGTCGATATGTTGAAGAGCTACGCTCACTCGTTCCAATACTGGAGCGAGTGCTTATCGATGGCAGAGTTTGCCATCAATAACTCAGTGCATGCCTCGACCGGGCATACACCGTTCTACGTGAATGCCATGCGGCATCCACGTCTACCGAGTTTACTCGGAGTGATGGCTCCCACTTTAAGTGGGGGAGGATCTACGACTGCAATACAGCAGCCGCAGAAAACCGCTGACACTTGCACAGTGTCAGCTGCAACAATGGACAAACCACATGAGTCTGCGCAGGGCGCAGACTCCCCCAACAACAAGGCCAACGACCACGGGTCTGCGCAGGGCGCAGACACCGCAAAGAACCACGCAGAGGCCGGGCCTCTAGCGGAGAGCGAGCTGAATGACTTCAGCTCGGATGCAATCAGTTTCATCACCAAAAGACAAGCCGTGATTCGGTTTGTCCAAGACACAATAGCAGCTTCTGTTGATCAACAGAAGCTGAACGCAGACAATGCGGGCAGAGGCAACACAAATGAATTTAAAGTTGGTTCATTAGTTTTGTTAGCTACACAAAACCTGCCTAGACATGCAGTTTCGGATTTCGGAGCAAGCAAGCTTGCTCCGCGCTTCATCGGGCCGTTCACTGTGTTGGCACGGCACGGCAACGCATACACGCTAGACATACCGTCTAGCATGCGCCTCCATCCGACCTTTTACGTCGGACGGCTGAAGCCATACCTGCAGCACGAGCCATCTAGCTCGGCTGACCCGAAGCCTCGGCAGGAGCCGAGGCAGAAGCGGAGGACTTGGCCTCGGCGACGAGCAACCTCTCCTCCAGCGCGCGGACGCGCTGGAGCAACCCCTTCATCTGGGTCCCCAGCTCGACCTGGATATTCGAGGCGGTCTGCGAGACCGCCGCGACTTGGGCCTTCTGGTTCGCCAGCTCCTGTTTCAGGGCGGCGAACTCAGCGCCCTGCAGACGCTCCACGGCGGTCACCCGGTCGTGGAGAGGCGCATACTGATCAGCCCGGGGCTGATCATACCCGGGGCGTGTTCCCACCCCCGCCACCGCCGATCCGTGACGCCCGCGGCTCAACCCGCTGGATTGTTGAGCGGATTGTTGACCATAGTATCCCGAAAACGAACCCTCAAGGGGCTCGTTTTCGTATTCGTTGGAGAGGATTTCCTCCCCATCGAGATACATGGGAGCCGCGGAACGTCTTGCTGGAGGACGTTCCGGAAATGGTGAGGGCGTACGAGGAGCAGTACGCGCTGGCGCAGCGGAAGTAACACGAGCGCTGCGATCATCGCTAGCGCCCGAACCCTCACGTGCTAAGAACTTAGCACGGAGCTCTTTGAGACTCTCGGGCACAC OLD KEY: TGCGATCATCGCTAGCGCCCGAACCCTCACGTGCT NEW KEY: CTTAGCACGGAGCTCTTTGAGACTCTCGGGCACAC ........ _A_ 000X00X000X00000000X0X000000000X0X001XX00X00000X0000000X10000000000000XX000 __109__ ........ _T_ 0XX0000000000X0XXX00000X0X000000000000000000X0X00000XX000090000090009000000 __109__ ........ _G_ 0000X000XX0X000000X0X000000XXX00000X9000X00X0X00000X00009X00X0XX00X00000X0X __109__ ........ _C_ X0000X0X0000X0X0000000X0X0X000X0X0X0000900X00000XXX000X0000X0X000X0X0X000X0 __109__ ........ _N_ 000000000000000000000000000000000000000000000000000000000000000000000000000 __109__ ........ ALL wwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwvvutttsssrrrqqqpoomkh __109__ ******** *** ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^**************************************** __109__ ######## CNS CTTAGCACGGAGCTCTTTGAGACTCTCGGGCACACGgAAcGACGTGTACCCGTTCAgGtCGCGGtCGCtCAAGCG __109__ ######## QLT XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX+XX+XXXXXXXXXXXXXXXX+X+XXXXX+XXX+XXXXXX __109__ >CONSENSUS__109__ Length: 4364 [gain: 40] ATGGCGTCGAGGTGACGAAGGCGTGTCAACTCCGGGAGTTGACGCTGCAAACAGTGCGGACGGTTGCAAACGTACCGCACTGACGCAATTTGCATGCTGTCGTGCAGCCGGGCTGCACGACGAAGCGCCATGCGATCAAGCCGGGCTTGATATCGCGCGCCCGCAGACAGGGTCTGCCGGCGAAGGGACACATTACCGTGCAGCCGGGCTGCACGAAGGAAAATGCGGTCAAGCCGGGCTTGATACCGCGCGCCCGCGGACAGGGTCCGCCGGCGAACGACTGTCCACGGCCGGGCCTGGACCAGAAGAACAACTGTGCGGAGCCGGGCTCCGCACAACAAGAAGACGGCGCAAGCGGAAAACGCTGCGCAAGTCTCGGTCCGGGACCGAGACGCAACAAGAGCAGTCTGCTGGGCAGACTGCGGCGGTGACGCCGAATGTCAAGACGCTAAGCGTCTTGACGCGCACCGATACTGGATTCCAGTATCGTGACATGGAACTCGCTAGTCCTCCGACGACGGCGTCGGAGTTGACTTCGCTTCCAGCCATGAGCTGGAAGCGCTTCACGCGCGACTTGCACGATGGACGCATCGAGCAAGTCTGCGTTCTTTCGGACAGCGAAAGAACGGAGAGCGAGAGCGAAGAGCTGAGGCAGCTCTTCATGGGAAGTACCACTGAGAGTGAAGACACTCTCAGTGCGAAGACGAAGCGAGAGCGCTTCGAGGAACAAGGTTGGGACTCGCTGAAGTCGAGTCCCTATTACGAATTGTTGAGGGAGTACAAAGACGTACTCCCGGAAGAGATTCCTGCGGAGCTTCCGCAGGATAAGGGCATTCAGCACGAGATTGATCTCGTGCCGGGCACGAAGTACTGTGTCACGCGGCAGTGGCCACTGCCGCGAGAGCAAGTGAAAGCGATCGACGACTTCTTTGAAAGTCGTCGTAAAGCAGGACAAGTGCGGGAATCAAAGTCCCCGCACAGTGCTCCGACGTTCTGTGTCAAGAAGCCACAGGGCGGATGGCGCATCGTTCATGCCTACAACAAGCTGAACGATGCGACGGTACCGGCGCAGACGCCGATACCGCGAAAAGATGTTATCATCGATTCGATGGCCGGGAGCACCGTTTACAGTGCTCTCGACTTGCGAGATGGATTTTATCAAATCCTAATGCGTGAGAGCGATATCCCTCTCACGGCAGTGAGCACGCCAAGCGGCATGCTCTGGGAATGGCTAGTAATGCCACAGGGGCTTAAGAACGCCCCTGCGACTTTCAACAGGTGCGTGACGCACTTGTTGCGCTCGGTGCGCGACTTCGCACCGAGCTACTTCGATGATGTATTCATCCACAGCCGGGCTGTGGACGGGAAGACCGACGTAGAGATGCACAGGGTGCATCTCCGGAAGCTACTTGAGCTTATGCGAAAGCATAAGCTCTACGCGAACCTGAAGAAGTGTATCTTCGGGGCGAGCGAGATACCCGTCCTCGGGTGTCTCGTAGGGAAGAATGGTGTTCGCCCTGACCCGGAAAAGGTCAGAGTGATCAATGAATGGCCAACGCCTTCAAGTGTCAAGGAACTGAGGCAGTTCCTTGGCTTGGCCACGTACTTGTGCAAGTACGTGGAGGATTATGCGGGCAAGATCCGCCCGCTGTCACAGCTTCTTAAGAAAGAAGCTGTGTGGAATTGGACACCCGATTGCCAAAAGGCATTCGATGCAGTCAAGCGGGGCTTGACTGAGGCGCCGATCTTGGCAGTGGCTGACCAAGATCGCCCATTTCACGTAGTGTGTGACGCATCCGATTTCGCGATCGGATGCGCGTTGATGCAGCACGATCACGAGGGCCGTGATCGTGTCGTCTACTACCAATCGCGTCAGCTGAAGCCAGCTGAGCGCAACTATCCGGTGCATGACAAGGAACTCCTTGCCATGAAGTATGCACTCGCAAAGTTCCGAGTGTACTTGCTTGGGAGTAGACCATTTGTGGTCTACACCGACCATGCTTCACTGCGCACCGCAGTGAAGTCGCCACACATTTCACAAAGAATGGCGAGATGGCTCTCATTCTTTGCGGAGTATAACTTCCGGGTCGAATACAAACCCGGAAGATTGAACGTGGTGGCCGACGCGTTATCACGTCGGCCGGACTATGCAGAAGCTGTTGACGTCAATGCCATTGACGCCATGCGATCGAGCAAACCCACATCATCTCTGTTGGATGATGTGAAGGCCGCGTACGCGCACGACGCGGACGCGAAGCTCTTGCTGGCCTATGGCACAGCGCCTTCTGACAAGTCCCGTCAGAAGCTGCCCAAGCACCTTCGAGCGCGTGCACACCGCTTTCGTGTGCACGACGGACTACTGCTTTACAATGCAGTCGACGACAACGCGGATCGCGTTGTCGTGCCAAATGACCATGACCTGCGACTCAGGATCATGTACGAGTATCATGATGCCCCGACTGCGGGACATCTCGGACGTGAGAAGACTTACGTCCTTCTCACGCGCGACTTCTACTGGCACCACCAGTATAAGTGGGTGCGCAAGTACATCCGTGCTTGCGAGGTATGCCAACGCGTAAAGCCTGCGCCATTCGCGCAGGCTCCACTGCAATCACTACCGACTCCGTCGGAGTGTTGGAAGTCCATGTCTTTGGACTTCATCTTTGGTCTTCCCCCGGACAGCGGAGGGAATACCGGTGTTGTGGTCTTCGTCGACCGCTTCAGCAAGATGGTACATCTTGCTGCGGTGCCGGCAGAAGTGACCGCGAAGCAGACGGCCCGTCTGTTCGTCGACATGGTGTTCAAACACCATGGCATGCCGACCGACATCGTGTCGGACAGAGACCCGCGCTTCACAGCGCACCTGTGGCAAGAAGTGTTTACACTTCTTGGGAGCCAGCTTTCCATGTCGACTGCGGATCATCCGCAGACGGACGGTCAAACCGAGCGCGTGAATCGCGTGCTCGTCGATATGTTGAAGAGCTACGCTCACTCGTTCCAATACTGGAGCGAGTGCTTATCGATGGCAGAGTTTGCCATCAATAACTCAGTGCATGCCTCGACCGGGCATACACCGTTCTACGTGAATGCCATGCGGCATCCACGTCTACCGAGTTTACTCGGAGTGATGGCTCCCACTTTAAGTGGGGGAGGATCTACGACTGCAATACAGCAGCCGCAGAAAACCGCTGACACTTGCACAGTGTCAGCTGCAACAATGGACAAACCACATGAGTCTGCGCAGGGCGCAGACTCCCCCAACAACAAGGCCAACGACCACGGGTCTGCGCAGGGCGCAGACACCGCAAAGAACCACGCAGAGGCCGGGCCTCTAGCGGAGAGCGAGCTGAATGACTTCAGCTCGGATGCAATCAGTTTCATCACCAAAAGACAAGCCGTGATTCGGTTTGTCCAAGACACAATAGCAGCTTCTGTTGATCAACAGAAGCTGAACGCAGACAATGCGGGCAGAGGCAACACAAATGAATTTAAAGTTGGTTCATTAGTTTTGTTAGCTACACAAAACCTGCCTAGACATGCAGTTTCGGATTTCGGAGCAAGCAAGCTTGCTCCGCGCTTCATCGGGCCGTTCACTGTGTTGGCACGGCACGGCAACGCATACACGCTAGACATACCGTCTAGCATGCGCCTCCATCCGACCTTTTACGTCGGACGGCTGAAGCCATACCTGCAGCACGAGCCATCTAGCTCGGCTGACCCGAAGCCTCGGCAGGAGCCGAGGCAGAAGCGGAGGACTTGGCCTCGGCGACGAGCAACCTCTCCTCCAGCGCGCGGACGCGCTGGAGCAACCCCTTCATCTGGGTCCCCAGCTCGACCTGGATATTCGAGGCGGTCTGCGAGACCGCCGCGACTTGGGCCTTCTGGTTCGCCAGCTCCTGTTTCAGGGCGGCGAACTCAGCGCCCTGCAGACGCTCCACGGCGGTCACCCGGTCGTGGAGAGGCGCATACTGATCAGCCCGGGGCTGATCATACCCGGGGCGTGTTCCCACCCCCGCCACCGCCGATCCGTGACGCCCGCGGCTCAACCCGCTGGATTGTTGAGCGGATTGTTGACCATAGTATCCCGAAAACGAACCCTCAAGGGGCTCGTTTTCGTATTCGTTGGAGAGGATTTCCTCCCCATCGAGATACATGGGAGCCGCGGAACGTCTTGCTGGAGGACGTTCCGGAAATGGTGAGGGCGTACGAGGAGCAGTACGCGCTGGCGCAGCGGAAGTAACACGAGCGCTGCGATCATCGCTAGCGCCCGAACCCTCACGTGCTAAGAACTTAGCACGGAGCTCTTTGAGACTCTCGGGCACACGGAACGACGTGTACCCGTTCAGGTCGCGGTCGCTCAAGCG OLD KEY: CTTAGCACGGAGCTCTTTGAGACTCTCGGGCACAC NEW KEY: GACGTGTACCCGTTCAGGTCGCGGTCGCTCAAGCG ........ _A_ 0X00000X0000000X00000000000000XX0000X00001000004XX00X00000000X000XXX0000000 __110__ ........ _T_ 0000X0X00000XX0000X00000X000X0000000000000009000000000XX0080000X00000000X00 __110__ ........ _G_ X00X0X00000X0000XX00X0XX00X00000X0XX000X09000XX600X000000X0X0000X000X00000X __110__ ........ _C_ 00X00000XXX000X0000X0X000X0X0X000X000XX0X0XX1000000X0X00X020X0X000000XXX0X0 __110__ ........ _N_ 000000000000000000000000000000000000000000000000000000000000000000000000000 __110__ ........ ALL wwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwvvuutttssrrrqqpppoolh __110__ ******** *** ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^**************************************** __110__ ######## CNS GACGTGTACCCGTTCAGGTCGCGGTCGCTCAAGCGGACCGCgCCtGGgAAGCACTTCGtGCACTGAAAGCCCTCG __110__ ######## QLT XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX+XX+XX!XXXXXXXXXX+XXXXXXXXXXXXXXXX __110__ >CONSENSUS__110__ Length: 4404 [gain: 40] ATGGCGTCGAGGTGACGAAGGCGTGTCAACTCCGGGAGTTGACGCTGCAAACAGTGCGGACGGTTGCAAACGTACCGCACTGACGCAATTTGCATGCTGTCGTGCAGCCGGGCTGCACGACGAAGCGCCATGCGATCAAGCCGGGCTTGATATCGCGCGCCCGCAGACAGGGTCTGCCGGCGAAGGGACACATTACCGTGCAGCCGGGCTGCACGAAGGAAAATGCGGTCAAGCCGGGCTTGATACCGCGCGCCCGCGGACAGGGTCCGCCGGCGAACGACTGTCCACGGCCGGGCCTGGACCAGAAGAACAACTGTGCGGAGCCGGGCTCCGCACAACAAGAAGACGGCGCAAGCGGAAAACGCTGCGCAAGTCTCGGTCCGGGACCGAGACGCAACAAGAGCAGTCTGCTGGGCAGACTGCGGCGGTGACGCCGAATGTCAAGACGCTAAGCGTCTTGACGCGCACCGATACTGGATTCCAGTATCGTGACATGGAACTCGCTAGTCCTCCGACGACGGCGTCGGAGTTGACTTCGCTTCCAGCCATGAGCTGGAAGCGCTTCACGCGCGACTTGCACGATGGACGCATCGAGCAAGTCTGCGTTCTTTCGGACAGCGAAAGAACGGAGAGCGAGAGCGAAGAGCTGAGGCAGCTCTTCATGGGAAGTACCACTGAGAGTGAAGACACTCTCAGTGCGAAGACGAAGCGAGAGCGCTTCGAGGAACAAGGTTGGGACTCGCTGAAGTCGAGTCCCTATTACGAATTGTTGAGGGAGTACAAAGACGTACTCCCGGAAGAGATTCCTGCGGAGCTTCCGCAGGATAAGGGCATTCAGCACGAGATTGATCTCGTGCCGGGCACGAAGTACTGTGTCACGCGGCAGTGGCCACTGCCGCGAGAGCAAGTGAAAGCGATCGACGACTTCTTTGAAAGTCGTCGTAAAGCAGGACAAGTGCGGGAATCAAAGTCCCCGCACAGTGCTCCGACGTTCTGTGTCAAGAAGCCACAGGGCGGATGGCGCATCGTTCATGCCTACAACAAGCTGAACGATGCGACGGTACCGGCGCAGACGCCGATACCGCGAAAAGATGTTATCATCGATTCGATGGCCGGGAGCACCGTTTACAGTGCTCTCGACTTGCGAGATGGATTTTATCAAATCCTAATGCGTGAGAGCGATATCCCTCTCACGGCAGTGAGCACGCCAAGCGGCATGCTCTGGGAATGGCTAGTAATGCCACAGGGGCTTAAGAACGCCCCTGCGACTTTCAACAGGTGCGTGACGCACTTGTTGCGCTCGGTGCGCGACTTCGCACCGAGCTACTTCGATGATGTATTCATCCACAGCCGGGCTGTGGACGGGAAGACCGACGTAGAGATGCACAGGGTGCATCTCCGGAAGCTACTTGAGCTTATGCGAAAGCATAAGCTCTACGCGAACCTGAAGAAGTGTATCTTCGGGGCGAGCGAGATACCCGTCCTCGGGTGTCTCGTAGGGAAGAATGGTGTTCGCCCTGACCCGGAAAAGGTCAGAGTGATCAATGAATGGCCAACGCCTTCAAGTGTCAAGGAACTGAGGCAGTTCCTTGGCTTGGCCACGTACTTGTGCAAGTACGTGGAGGATTATGCGGGCAAGATCCGCCCGCTGTCACAGCTTCTTAAGAAAGAAGCTGTGTGGAATTGGACACCCGATTGCCAAAAGGCATTCGATGCAGTCAAGCGGGGCTTGACTGAGGCGCCGATCTTGGCAGTGGCTGACCAAGATCGCCCATTTCACGTAGTGTGTGACGCATCCGATTTCGCGATCGGATGCGCGTTGATGCAGCACGATCACGAGGGCCGTGATCGTGTCGTCTACTACCAATCGCGTCAGCTGAAGCCAGCTGAGCGCAACTATCCGGTGCATGACAAGGAACTCCTTGCCATGAAGTATGCACTCGCAAAGTTCCGAGTGTACTTGCTTGGGAGTAGACCATTTGTGGTCTACACCGACCATGCTTCACTGCGCACCGCAGTGAAGTCGCCACACATTTCACAAAGAATGGCGAGATGGCTCTCATTCTTTGCGGAGTATAACTTCCGGGTCGAATACAAACCCGGAAGATTGAACGTGGTGGCCGACGCGTTATCACGTCGGCCGGACTATGCAGAAGCTGTTGACGTCAATGCCATTGACGCCATGCGATCGAGCAAACCCACATCATCTCTGTTGGATGATGTGAAGGCCGCGTACGCGCACGACGCGGACGCGAAGCTCTTGCTGGCCTATGGCACAGCGCCTTCTGACAAGTCCCGTCAGAAGCTGCCCAAGCACCTTCGAGCGCGTGCACACCGCTTTCGTGTGCACGACGGACTACTGCTTTACAATGCAGTCGACGACAACGCGGATCGCGTTGTCGTGCCAAATGACCATGACCTGCGACTCAGGATCATGTACGAGTATCATGATGCCCCGACTGCGGGACATCTCGGACGTGAGAAGACTTACGTCCTTCTCACGCGCGACTTCTACTGGCACCACCAGTATAAGTGGGTGCGCAAGTACATCCGTGCTTGCGAGGTATGCCAACGCGTAAAGCCTGCGCCATTCGCGCAGGCTCCACTGCAATCACTACCGACTCCGTCGGAGTGTTGGAAGTCCATGTCTTTGGACTTCATCTTTGGTCTTCCCCCGGACAGCGGAGGGAATACCGGTGTTGTGGTCTTCGTCGACCGCTTCAGCAAGATGGTACATCTTGCTGCGGTGCCGGCAGAAGTGACCGCGAAGCAGACGGCCCGTCTGTTCGTCGACATGGTGTTCAAACACCATGGCATGCCGACCGACATCGTGTCGGACAGAGACCCGCGCTTCACAGCGCACCTGTGGCAAGAAGTGTTTACACTTCTTGGGAGCCAGCTTTCCATGTCGACTGCGGATCATCCGCAGACGGACGGTCAAACCGAGCGCGTGAATCGCGTGCTCGTCGATATGTTGAAGAGCTACGCTCACTCGTTCCAATACTGGAGCGAGTGCTTATCGATGGCAGAGTTTGCCATCAATAACTCAGTGCATGCCTCGACCGGGCATACACCGTTCTACGTGAATGCCATGCGGCATCCACGTCTACCGAGTTTACTCGGAGTGATGGCTCCCACTTTAAGTGGGGGAGGATCTACGACTGCAATACAGCAGCCGCAGAAAACCGCTGACACTTGCACAGTGTCAGCTGCAACAATGGACAAACCACATGAGTCTGCGCAGGGCGCAGACTCCCCCAACAACAAGGCCAACGACCACGGGTCTGCGCAGGGCGCAGACACCGCAAAGAACCACGCAGAGGCCGGGCCTCTAGCGGAGAGCGAGCTGAATGACTTCAGCTCGGATGCAATCAGTTTCATCACCAAAAGACAAGCCGTGATTCGGTTTGTCCAAGACACAATAGCAGCTTCTGTTGATCAACAGAAGCTGAACGCAGACAATGCGGGCAGAGGCAACACAAATGAATTTAAAGTTGGTTCATTAGTTTTGTTAGCTACACAAAACCTGCCTAGACATGCAGTTTCGGATTTCGGAGCAAGCAAGCTTGCTCCGCGCTTCATCGGGCCGTTCACTGTGTTGGCACGGCACGGCAACGCATACACGCTAGACATACCGTCTAGCATGCGCCTCCATCCGACCTTTTACGTCGGACGGCTGAAGCCATACCTGCAGCACGAGCCATCTAGCTCGGCTGACCCGAAGCCTCGGCAGGAGCCGAGGCAGAAGCGGAGGACTTGGCCTCGGCGACGAGCAACCTCTCCTCCAGCGCGCGGACGCGCTGGAGCAACCCCTTCATCTGGGTCCCCAGCTCGACCTGGATATTCGAGGCGGTCTGCGAGACCGCCGCGACTTGGGCCTTCTGGTTCGCCAGCTCCTGTTTCAGGGCGGCGAACTCAGCGCCCTGCAGACGCTCCACGGCGGTCACCCGGTCGTGGAGAGGCGCATACTGATCAGCCCGGGGCTGATCATACCCGGGGCGTGTTCCCACCCCCGCCACCGCCGATCCGTGACGCCCGCGGCTCAACCCGCTGGATTGTTGAGCGGATTGTTGACCATAGTATCCCGAAAACGAACCCTCAAGGGGCTCGTTTTCGTATTCGTTGGAGAGGATTTCCTCCCCATCGAGATACATGGGAGCCGCGGAACGTCTTGCTGGAGGACGTTCCGGAAATGGTGAGGGCGTACGAGGAGCAGTACGCGCTGGCGCAGCGGAAGTAACACGAGCGCTGCGATCATCGCTAGCGCCCGAACCCTCACGTGCTAAGAACTTAGCACGGAGCTCTTTGAGACTCTCGGGCACACGGAACGACGTGTACCCGTTCAGGTCGCGGTCGCTCAAGCGGACCGCGCCTGGGAAGCACTTCGTGCACTGAAAGCCCTCG OLD KEY: GACGTGTACCCGTTCAGGTCGCGGTCGCTCAAGCG NEW KEY: CGCCTGGGAAGCACTTCGTGCACTGAAAGCCCTCG ........ _A_ 00000000XX00X00000000X000XXX0000000000X0X0000X0000X0900200000000600X00XX070 __111__ ........ _T_ 0000X000000000XX00X0000X00000000X00000000000000000000XX6000900X00000000000X __111__ ........ _G_ 0X000XXX00X000000X0X0000X000X00000XXX0000X0X000XX0000000900000000X00X000030 __111__ ........ _C_ X0XX0000000X0X00X000X0X000000XXX0X000X0X00X0X0X00X0X00020XX0X90X40X00X00X00 __111__ ........ _N_ 000000000000000000000000000000000000000000000000000000000000000000000000000 __111__ ........ ALL ttttttttttttttttttttttttttttttttttttsssssssrrrrrrrqqqqqppppoooooomkkjifedcb __111__ ******** *** ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^**************************************** __111__ ######## CNS CGCCTGGGAAGCACTTCGTGCACTGAAAGCCCTCGGGCACAGCGCACGGCACaTTtgCCtCcTCaGCAGCAACaT __111__ ######## QLT XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX+XX!+XX+X+XX!XXXXXXXX@X __111__ >CONSENSUS__111__ Length: 4444 [gain: 40] ATGGCGTCGAGGTGACGAAGGCGTGTCAACTCCGGGAGTTGACGCTGCAAACAGTGCGGACGGTTGCAAACGTACCGCACTGACGCAATTTGCATGCTGTCGTGCAGCCGGGCTGCACGACGAAGCGCCATGCGATCAAGCCGGGCTTGATATCGCGCGCCCGCAGACAGGGTCTGCCGGCGAAGGGACACATTACCGTGCAGCCGGGCTGCACGAAGGAAAATGCGGTCAAGCCGGGCTTGATACCGCGCGCCCGCGGACAGGGTCCGCCGGCGAACGACTGTCCACGGCCGGGCCTGGACCAGAAGAACAACTGTGCGGAGCCGGGCTCCGCACAACAAGAAGACGGCGCAAGCGGAAAACGCTGCGCAAGTCTCGGTCCGGGACCGAGACGCAACAAGAGCAGTCTGCTGGGCAGACTGCGGCGGTGACGCCGAATGTCAAGACGCTAAGCGTCTTGACGCGCACCGATACTGGATTCCAGTATCGTGACATGGAACTCGCTAGTCCTCCGACGACGGCGTCGGAGTTGACTTCGCTTCCAGCCATGAGCTGGAAGCGCTTCACGCGCGACTTGCACGATGGACGCATCGAGCAAGTCTGCGTTCTTTCGGACAGCGAAAGAACGGAGAGCGAGAGCGAAGAGCTGAGGCAGCTCTTCATGGGAAGTACCACTGAGAGTGAAGACACTCTCAGTGCGAAGACGAAGCGAGAGCGCTTCGAGGAACAAGGTTGGGACTCGCTGAAGTCGAGTCCCTATTACGAATTGTTGAGGGAGTACAAAGACGTACTCCCGGAAGAGATTCCTGCGGAGCTTCCGCAGGATAAGGGCATTCAGCACGAGATTGATCTCGTGCCGGGCACGAAGTACTGTGTCACGCGGCAGTGGCCACTGCCGCGAGAGCAAGTGAAAGCGATCGACGACTTCTTTGAAAGTCGTCGTAAAGCAGGACAAGTGCGGGAATCAAAGTCCCCGCACAGTGCTCCGACGTTCTGTGTCAAGAAGCCACAGGGCGGATGGCGCATCGTTCATGCCTACAACAAGCTGAACGATGCGACGGTACCGGCGCAGACGCCGATACCGCGAAAAGATGTTATCATCGATTCGATGGCCGGGAGCACCGTTTACAGTGCTCTCGACTTGCGAGATGGATTTTATCAAATCCTAATGCGTGAGAGCGATATCCCTCTCACGGCAGTGAGCACGCCAAGCGGCATGCTCTGGGAATGGCTAGTAATGCCACAGGGGCTTAAGAACGCCCCTGCGACTTTCAACAGGTGCGTGACGCACTTGTTGCGCTCGGTGCGCGACTTCGCACCGAGCTACTTCGATGATGTATTCATCCACAGCCGGGCTGTGGACGGGAAGACCGACGTAGAGATGCACAGGGTGCATCTCCGGAAGCTACTTGAGCTTATGCGAAAGCATAAGCTCTACGCGAACCTGAAGAAGTGTATCTTCGGGGCGAGCGAGATACCCGTCCTCGGGTGTCTCGTAGGGAAGAATGGTGTTCGCCCTGACCCGGAAAAGGTCAGAGTGATCAATGAATGGCCAACGCCTTCAAGTGTCAAGGAACTGAGGCAGTTCCTTGGCTTGGCCACGTACTTGTGCAAGTACGTGGAGGATTATGCGGGCAAGATCCGCCCGCTGTCACAGCTTCTTAAGAAAGAAGCTGTGTGGAATTGGACACCCGATTGCCAAAAGGCATTCGATGCAGTCAAGCGGGGCTTGACTGAGGCGCCGATCTTGGCAGTGGCTGACCAAGATCGCCCATTTCACGTAGTGTGTGACGCATCCGATTTCGCGATCGGATGCGCGTTGATGCAGCACGATCACGAGGGCCGTGATCGTGTCGTCTACTACCAATCGCGTCAGCTGAAGCCAGCTGAGCGCAACTATCCGGTGCATGACAAGGAACTCCTTGCCATGAAGTATGCACTCGCAAAGTTCCGAGTGTACTTGCTTGGGAGTAGACCATTTGTGGTCTACACCGACCATGCTTCACTGCGCACCGCAGTGAAGTCGCCACACATTTCACAAAGAATGGCGAGATGGCTCTCATTCTTTGCGGAGTATAACTTCCGGGTCGAATACAAACCCGGAAGATTGAACGTGGTGGCCGACGCGTTATCACGTCGGCCGGACTATGCAGAAGCTGTTGACGTCAATGCCATTGACGCCATGCGATCGAGCAAACCCACATCATCTCTGTTGGATGATGTGAAGGCCGCGTACGCGCACGACGCGGACGCGAAGCTCTTGCTGGCCTATGGCACAGCGCCTTCTGACAAGTCCCGTCAGAAGCTGCCCAAGCACCTTCGAGCGCGTGCACACCGCTTTCGTGTGCACGACGGACTACTGCTTTACAATGCAGTCGACGACAACGCGGATCGCGTTGTCGTGCCAAATGACCATGACCTGCGACTCAGGATCATGTACGAGTATCATGATGCCCCGACTGCGGGACATCTCGGACGTGAGAAGACTTACGTCCTTCTCACGCGCGACTTCTACTGGCACCACCAGTATAAGTGGGTGCGCAAGTACATCCGTGCTTGCGAGGTATGCCAACGCGTAAAGCCTGCGCCATTCGCGCAGGCTCCACTGCAATCACTACCGACTCCGTCGGAGTGTTGGAAGTCCATGTCTTTGGACTTCATCTTTGGTCTTCCCCCGGACAGCGGAGGGAATACCGGTGTTGTGGTCTTCGTCGACCGCTTCAGCAAGATGGTACATCTTGCTGCGGTGCCGGCAGAAGTGACCGCGAAGCAGACGGCCCGTCTGTTCGTCGACATGGTGTTCAAACACCATGGCATGCCGACCGACATCGTGTCGGACAGAGACCCGCGCTTCACAGCGCACCTGTGGCAAGAAGTGTTTACACTTCTTGGGAGCCAGCTTTCCATGTCGACTGCGGATCATCCGCAGACGGACGGTCAAACCGAGCGCGTGAATCGCGTGCTCGTCGATATGTTGAAGAGCTACGCTCACTCGTTCCAATACTGGAGCGAGTGCTTATCGATGGCAGAGTTTGCCATCAATAACTCAGTGCATGCCTCGACCGGGCATACACCGTTCTACGTGAATGCCATGCGGCATCCACGTCTACCGAGTTTACTCGGAGTGATGGCTCCCACTTTAAGTGGGGGAGGATCTACGACTGCAATACAGCAGCCGCAGAAAACCGCTGACACTTGCACAGTGTCAGCTGCAACAATGGACAAACCACATGAGTCTGCGCAGGGCGCAGACTCCCCCAACAACAAGGCCAACGACCACGGGTCTGCGCAGGGCGCAGACACCGCAAAGAACCACGCAGAGGCCGGGCCTCTAGCGGAGAGCGAGCTGAATGACTTCAGCTCGGATGCAATCAGTTTCATCACCAAAAGACAAGCCGTGATTCGGTTTGTCCAAGACACAATAGCAGCTTCTGTTGATCAACAGAAGCTGAACGCAGACAATGCGGGCAGAGGCAACACAAATGAATTTAAAGTTGGTTCATTAGTTTTGTTAGCTACACAAAACCTGCCTAGACATGCAGTTTCGGATTTCGGAGCAAGCAAGCTTGCTCCGCGCTTCATCGGGCCGTTCACTGTGTTGGCACGGCACGGCAACGCATACACGCTAGACATACCGTCTAGCATGCGCCTCCATCCGACCTTTTACGTCGGACGGCTGAAGCCATACCTGCAGCACGAGCCATCTAGCTCGGCTGACCCGAAGCCTCGGCAGGAGCCGAGGCAGAAGCGGAGGACTTGGCCTCGGCGACGAGCAACCTCTCCTCCAGCGCGCGGACGCGCTGGAGCAACCCCTTCATCTGGGTCCCCAGCTCGACCTGGATATTCGAGGCGGTCTGCGAGACCGCCGCGACTTGGGCCTTCTGGTTCGCCAGCTCCTGTTTCAGGGCGGCGAACTCAGCGCCCTGCAGACGCTCCACGGCGGTCACCCGGTCGTGGAGAGGCGCATACTGATCAGCCCGGGGCTGATCATACCCGGGGCGTGTTCCCACCCCCGCCACCGCCGATCCGTGACGCCCGCGGCTCAACCCGCTGGATTGTTGAGCGGATTGTTGACCATAGTATCCCGAAAACGAACCCTCAAGGGGCTCGTTTTCGTATTCGTTGGAGAGGATTTCCTCCCCATCGAGATACATGGGAGCCGCGGAACGTCTTGCTGGAGGACGTTCCGGAAATGGTGAGGGCGTACGAGGAGCAGTACGCGCTGGCGCAGCGGAAGTAACACGAGCGCTGCGATCATCGCTAGCGCCCGAACCCTCACGTGCTAAGAACTTAGCACGGAGCTCTTTGAGACTCTCGGGCACACGGAACGACGTGTACCCGTTCAGGTCGCGGTCGCTCAAGCGGACCGCGCCTGGGAAGCACTTCGTGCACTGAAAGCCCTCGGGCACAGCGCACGGCACATTTGCCTCCTCAGCAGCAACAT OLD KEY: CGCCTGGGAAGCACTTCGTGCACTGAAAGCCCTCG NEW KEY: AGCGCACGGCACATTTGCCTCCTCAGCAGCAACAT ........ _A_ X0000X0000X0X00000000000X00X00XX0X00XX00000000X1000000X0000000X00X0000000XX __112__ ........ _T_ 0000000000000XXX000X00X00000000000X0000XX00X00000XXX000000XX0000X00090X0000 __112__ ........ _G_ 0X0X000XX0000000X00000000X00X000000X00X00X00000900000000X0000X0X000X0000X00 __112__ ........ _C_ 00X0X0X00X0X00000XX0XX0X00X00X00X000000000X0XX00X000XX0X0X00X00000900X0X000 __112__ ........ _N_ 000000000000000000000000000000000000000000000000000000000000000000000000000 __112__ ........ ALL wwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwvvvuuuttssrrrqqpppoomki __112__ ******** *** ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^**************************************** __112__ ######## CNS AGCGCACGGCACATTTGCCTCCTCAGCAGCAACATGAAGTTGCTCCAgCTTTCCACGCTTCGAGTAcGtCTCGAA __112__ ######## QLT XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX+XXXXXXXXXXXXXXXXXX+X+XXXXXX __112__ >CONSENSUS__112__ Length: 4484 [gain: 40] ATGGCGTCGAGGTGACGAAGGCGTGTCAACTCCGGGAGTTGACGCTGCAAACAGTGCGGACGGTTGCAAACGTACCGCACTGACGCAATTTGCATGCTGTCGTGCAGCCGGGCTGCACGACGAAGCGCCATGCGATCAAGCCGGGCTTGATATCGCGCGCCCGCAGACAGGGTCTGCCGGCGAAGGGACACATTACCGTGCAGCCGGGCTGCACGAAGGAAAATGCGGTCAAGCCGGGCTTGATACCGCGCGCCCGCGGACAGGGTCCGCCGGCGAACGACTGTCCACGGCCGGGCCTGGACCAGAAGAACAACTGTGCGGAGCCGGGCTCCGCACAACAAGAAGACGGCGCAAGCGGAAAACGCTGCGCAAGTCTCGGTCCGGGACCGAGACGCAACAAGAGCAGTCTGCTGGGCAGACTGCGGCGGTGACGCCGAATGTCAAGACGCTAAGCGTCTTGACGCGCACCGATACTGGATTCCAGTATCGTGACATGGAACTCGCTAGTCCTCCGACGACGGCGTCGGAGTTGACTTCGCTTCCAGCCATGAGCTGGAAGCGCTTCACGCGCGACTTGCACGATGGACGCATCGAGCAAGTCTGCGTTCTTTCGGACAGCGAAAGAACGGAGAGCGAGAGCGAAGAGCTGAGGCAGCTCTTCATGGGAAGTACCACTGAGAGTGAAGACACTCTCAGTGCGAAGACGAAGCGAGAGCGCTTCGAGGAACAAGGTTGGGACTCGCTGAAGTCGAGTCCCTATTACGAATTGTTGAGGGAGTACAAAGACGTACTCCCGGAAGAGATTCCTGCGGAGCTTCCGCAGGATAAGGGCATTCAGCACGAGATTGATCTCGTGCCGGGCACGAAGTACTGTGTCACGCGGCAGTGGCCACTGCCGCGAGAGCAAGTGAAAGCGATCGACGACTTCTTTGAAAGTCGTCGTAAAGCAGGACAAGTGCGGGAATCAAAGTCCCCGCACAGTGCTCCGACGTTCTGTGTCAAGAAGCCACAGGGCGGATGGCGCATCGTTCATGCCTACAACAAGCTGAACGATGCGACGGTACCGGCGCAGACGCCGATACCGCGAAAAGATGTTATCATCGATTCGATGGCCGGGAGCACCGTTTACAGTGCTCTCGACTTGCGAGATGGATTTTATCAAATCCTAATGCGTGAGAGCGATATCCCTCTCACGGCAGTGAGCACGCCAAGCGGCATGCTCTGGGAATGGCTAGTAATGCCACAGGGGCTTAAGAACGCCCCTGCGACTTTCAACAGGTGCGTGACGCACTTGTTGCGCTCGGTGCGCGACTTCGCACCGAGCTACTTCGATGATGTATTCATCCACAGCCGGGCTGTGGACGGGAAGACCGACGTAGAGATGCACAGGGTGCATCTCCGGAAGCTACTTGAGCTTATGCGAAAGCATAAGCTCTACGCGAACCTGAAGAAGTGTATCTTCGGGGCGAGCGAGATACCCGTCCTCGGGTGTCTCGTAGGGAAGAATGGTGTTCGCCCTGACCCGGAAAAGGTCAGAGTGATCAATGAATGGCCAACGCCTTCAAGTGTCAAGGAACTGAGGCAGTTCCTTGGCTTGGCCACGTACTTGTGCAAGTACGTGGAGGATTATGCGGGCAAGATCCGCCCGCTGTCACAGCTTCTTAAGAAAGAAGCTGTGTGGAATTGGACACCCGATTGCCAAAAGGCATTCGATGCAGTCAAGCGGGGCTTGACTGAGGCGCCGATCTTGGCAGTGGCTGACCAAGATCGCCCATTTCACGTAGTGTGTGACGCATCCGATTTCGCGATCGGATGCGCGTTGATGCAGCACGATCACGAGGGCCGTGATCGTGTCGTCTACTACCAATCGCGTCAGCTGAAGCCAGCTGAGCGCAACTATCCGGTGCATGACAAGGAACTCCTTGCCATGAAGTATGCACTCGCAAAGTTCCGAGTGTACTTGCTTGGGAGTAGACCATTTGTGGTCTACACCGACCATGCTTCACTGCGCACCGCAGTGAAGTCGCCACACATTTCACAAAGAATGGCGAGATGGCTCTCATTCTTTGCGGAGTATAACTTCCGGGTCGAATACAAACCCGGAAGATTGAACGTGGTGGCCGACGCGTTATCACGTCGGCCGGACTATGCAGAAGCTGTTGACGTCAATGCCATTGACGCCATGCGATCGAGCAAACCCACATCATCTCTGTTGGATGATGTGAAGGCCGCGTACGCGCACGACGCGGACGCGAAGCTCTTGCTGGCCTATGGCACAGCGCCTTCTGACAAGTCCCGTCAGAAGCTGCCCAAGCACCTTCGAGCGCGTGCACACCGCTTTCGTGTGCACGACGGACTACTGCTTTACAATGCAGTCGACGACAACGCGGATCGCGTTGTCGTGCCAAATGACCATGACCTGCGACTCAGGATCATGTACGAGTATCATGATGCCCCGACTGCGGGACATCTCGGACGTGAGAAGACTTACGTCCTTCTCACGCGCGACTTCTACTGGCACCACCAGTATAAGTGGGTGCGCAAGTACATCCGTGCTTGCGAGGTATGCCAACGCGTAAAGCCTGCGCCATTCGCGCAGGCTCCACTGCAATCACTACCGACTCCGTCGGAGTGTTGGAAGTCCATGTCTTTGGACTTCATCTTTGGTCTTCCCCCGGACAGCGGAGGGAATACCGGTGTTGTGGTCTTCGTCGACCGCTTCAGCAAGATGGTACATCTTGCTGCGGTGCCGGCAGAAGTGACCGCGAAGCAGACGGCCCGTCTGTTCGTCGACATGGTGTTCAAACACCATGGCATGCCGACCGACATCGTGTCGGACAGAGACCCGCGCTTCACAGCGCACCTGTGGCAAGAAGTGTTTACACTTCTTGGGAGCCAGCTTTCCATGTCGACTGCGGATCATCCGCAGACGGACGGTCAAACCGAGCGCGTGAATCGCGTGCTCGTCGATATGTTGAAGAGCTACGCTCACTCGTTCCAATACTGGAGCGAGTGCTTATCGATGGCAGAGTTTGCCATCAATAACTCAGTGCATGCCTCGACCGGGCATACACCGTTCTACGTGAATGCCATGCGGCATCCACGTCTACCGAGTTTACTCGGAGTGATGGCTCCCACTTTAAGTGGGGGAGGATCTACGACTGCAATACAGCAGCCGCAGAAAACCGCTGACACTTGCACAGTGTCAGCTGCAACAATGGACAAACCACATGAGTCTGCGCAGGGCGCAGACTCCCCCAACAACAAGGCCAACGACCACGGGTCTGCGCAGGGCGCAGACACCGCAAAGAACCACGCAGAGGCCGGGCCTCTAGCGGAGAGCGAGCTGAATGACTTCAGCTCGGATGCAATCAGTTTCATCACCAAAAGACAAGCCGTGATTCGGTTTGTCCAAGACACAATAGCAGCTTCTGTTGATCAACAGAAGCTGAACGCAGACAATGCGGGCAGAGGCAACACAAATGAATTTAAAGTTGGTTCATTAGTTTTGTTAGCTACACAAAACCTGCCTAGACATGCAGTTTCGGATTTCGGAGCAAGCAAGCTTGCTCCGCGCTTCATCGGGCCGTTCACTGTGTTGGCACGGCACGGCAACGCATACACGCTAGACATACCGTCTAGCATGCGCCTCCATCCGACCTTTTACGTCGGACGGCTGAAGCCATACCTGCAGCACGAGCCATCTAGCTCGGCTGACCCGAAGCCTCGGCAGGAGCCGAGGCAGAAGCGGAGGACTTGGCCTCGGCGACGAGCAACCTCTCCTCCAGCGCGCGGACGCGCTGGAGCAACCCCTTCATCTGGGTCCCCAGCTCGACCTGGATATTCGAGGCGGTCTGCGAGACCGCCGCGACTTGGGCCTTCTGGTTCGCCAGCTCCTGTTTCAGGGCGGCGAACTCAGCGCCCTGCAGACGCTCCACGGCGGTCACCCGGTCGTGGAGAGGCGCATACTGATCAGCCCGGGGCTGATCATACCCGGGGCGTGTTCCCACCCCCGCCACCGCCGATCCGTGACGCCCGCGGCTCAACCCGCTGGATTGTTGAGCGGATTGTTGACCATAGTATCCCGAAAACGAACCCTCAAGGGGCTCGTTTTCGTATTCGTTGGAGAGGATTTCCTCCCCATCGAGATACATGGGAGCCGCGGAACGTCTTGCTGGAGGACGTTCCGGAAATGGTGAGGGCGTACGAGGAGCAGTACGCGCTGGCGCAGCGGAAGTAACACGAGCGCTGCGATCATCGCTAGCGCCCGAACCCTCACGTGCTAAGAACTTAGCACGGAGCTCTTTGAGACTCTCGGGCACACGGAACGACGTGTACCCGTTCAGGTCGCGGTCGCTCAAGCGGACCGCGCCTGGGAAGCACTTCGTGCACTGAAAGCCCTCGGGCACAGCGCACGGCACATTTGCCTCCTCAGCAGCAACATGAAGTTGCTCCAGCTTTCCACGCTTCGAGTACGTCTCGAA OLD KEY: AGCGCACGGCACATTTGCCTCCTCAGCAGCAACAT NEW KEY: TGCTCCAGCTTTCCACGCTTCGAGTACGTCTCGAA ........ _A_ 000000X0000000X0000000X00X0000000XX000X00X00000000000XX0000X00X0000XX009000 __113__ ........ _T_ X00X00000XXX000000XX0000X000X0X00000000X0000000XX00XX00X0000X00000X000000X0 __113__ ........ _G_ 0X00000X00000000X0000X0X000X0000X00X0X00000X0X000X00000000X00000XX000X00000 __113__ ........ _C_ 00X0XX00X000XX0X0X00X00000X00X0X0000X000X0X0X0X000X00000XX000X0X000000X0X0X __113__ ........ _N_ 000000000000000000000000000000000000000000000000000000000000000000000000000 __113__ ........ ALL wwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwvvvuuutttssrrqqqpppooomkh __113__ ******** *** ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^**************************************** __113__ ######## CNS TGCTCCAGCTTTCCACGCTTCGAGTACGTCTCGAAGCGATCACGCGCTTGCTTAATCCGATCACGGTAAGCaCTC __113__ ######## QLT XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX+XXX __113__ >CONSENSUS__113__ Length: 4524 [gain: 40] ATGGCGTCGAGGTGACGAAGGCGTGTCAACTCCGGGAGTTGACGCTGCAAACAGTGCGGACGGTTGCAAACGTACCGCACTGACGCAATTTGCATGCTGTCGTGCAGCCGGGCTGCACGACGAAGCGCCATGCGATCAAGCCGGGCTTGATATCGCGCGCCCGCAGACAGGGTCTGCCGGCGAAGGGACACATTACCGTGCAGCCGGGCTGCACGAAGGAAAATGCGGTCAAGCCGGGCTTGATACCGCGCGCCCGCGGACAGGGTCCGCCGGCGAACGACTGTCCACGGCCGGGCCTGGACCAGAAGAACAACTGTGCGGAGCCGGGCTCCGCACAACAAGAAGACGGCGCAAGCGGAAAACGCTGCGCAAGTCTCGGTCCGGGACCGAGACGCAACAAGAGCAGTCTGCTGGGCAGACTGCGGCGGTGACGCCGAATGTCAAGACGCTAAGCGTCTTGACGCGCACCGATACTGGATTCCAGTATCGTGACATGGAACTCGCTAGTCCTCCGACGACGGCGTCGGAGTTGACTTCGCTTCCAGCCATGAGCTGGAAGCGCTTCACGCGCGACTTGCACGATGGACGCATCGAGCAAGTCTGCGTTCTTTCGGACAGCGAAAGAACGGAGAGCGAGAGCGAAGAGCTGAGGCAGCTCTTCATGGGAAGTACCACTGAGAGTGAAGACACTCTCAGTGCGAAGACGAAGCGAGAGCGCTTCGAGGAACAAGGTTGGGACTCGCTGAAGTCGAGTCCCTATTACGAATTGTTGAGGGAGTACAAAGACGTACTCCCGGAAGAGATTCCTGCGGAGCTTCCGCAGGATAAGGGCATTCAGCACGAGATTGATCTCGTGCCGGGCACGAAGTACTGTGTCACGCGGCAGTGGCCACTGCCGCGAGAGCAAGTGAAAGCGATCGACGACTTCTTTGAAAGTCGTCGTAAAGCAGGACAAGTGCGGGAATCAAAGTCCCCGCACAGTGCTCCGACGTTCTGTGTCAAGAAGCCACAGGGCGGATGGCGCATCGTTCATGCCTACAACAAGCTGAACGATGCGACGGTACCGGCGCAGACGCCGATACCGCGAAAAGATGTTATCATCGATTCGATGGCCGGGAGCACCGTTTACAGTGCTCTCGACTTGCGAGATGGATTTTATCAAATCCTAATGCGTGAGAGCGATATCCCTCTCACGGCAGTGAGCACGCCAAGCGGCATGCTCTGGGAATGGCTAGTAATGCCACAGGGGCTTAAGAACGCCCCTGCGACTTTCAACAGGTGCGTGACGCACTTGTTGCGCTCGGTGCGCGACTTCGCACCGAGCTACTTCGATGATGTATTCATCCACAGCCGGGCTGTGGACGGGAAGACCGACGTAGAGATGCACAGGGTGCATCTCCGGAAGCTACTTGAGCTTATGCGAAAGCATAAGCTCTACGCGAACCTGAAGAAGTGTATCTTCGGGGCGAGCGAGATACCCGTCCTCGGGTGTCTCGTAGGGAAGAATGGTGTTCGCCCTGACCCGGAAAAGGTCAGAGTGATCAATGAATGGCCAACGCCTTCAAGTGTCAAGGAACTGAGGCAGTTCCTTGGCTTGGCCACGTACTTGTGCAAGTACGTGGAGGATTATGCGGGCAAGATCCGCCCGCTGTCACAGCTTCTTAAGAAAGAAGCTGTGTGGAATTGGACACCCGATTGCCAAAAGGCATTCGATGCAGTCAAGCGGGGCTTGACTGAGGCGCCGATCTTGGCAGTGGCTGACCAAGATCGCCCATTTCACGTAGTGTGTGACGCATCCGATTTCGCGATCGGATGCGCGTTGATGCAGCACGATCACGAGGGCCGTGATCGTGTCGTCTACTACCAATCGCGTCAGCTGAAGCCAGCTGAGCGCAACTATCCGGTGCATGACAAGGAACTCCTTGCCATGAAGTATGCACTCGCAAAGTTCCGAGTGTACTTGCTTGGGAGTAGACCATTTGTGGTCTACACCGACCATGCTTCACTGCGCACCGCAGTGAAGTCGCCACACATTTCACAAAGAATGGCGAGATGGCTCTCATTCTTTGCGGAGTATAACTTCCGGGTCGAATACAAACCCGGAAGATTGAACGTGGTGGCCGACGCGTTATCACGTCGGCCGGACTATGCAGAAGCTGTTGACGTCAATGCCATTGACGCCATGCGATCGAGCAAACCCACATCATCTCTGTTGGATGATGTGAAGGCCGCGTACGCGCACGACGCGGACGCGAAGCTCTTGCTGGCCTATGGCACAGCGCCTTCTGACAAGTCCCGTCAGAAGCTGCCCAAGCACCTTCGAGCGCGTGCACACCGCTTTCGTGTGCACGACGGACTACTGCTTTACAATGCAGTCGACGACAACGCGGATCGCGTTGTCGTGCCAAATGACCATGACCTGCGACTCAGGATCATGTACGAGTATCATGATGCCCCGACTGCGGGACATCTCGGACGTGAGAAGACTTACGTCCTTCTCACGCGCGACTTCTACTGGCACCACCAGTATAAGTGGGTGCGCAAGTACATCCGTGCTTGCGAGGTATGCCAACGCGTAAAGCCTGCGCCATTCGCGCAGGCTCCACTGCAATCACTACCGACTCCGTCGGAGTGTTGGAAGTCCATGTCTTTGGACTTCATCTTTGGTCTTCCCCCGGACAGCGGAGGGAATACCGGTGTTGTGGTCTTCGTCGACCGCTTCAGCAAGATGGTACATCTTGCTGCGGTGCCGGCAGAAGTGACCGCGAAGCAGACGGCCCGTCTGTTCGTCGACATGGTGTTCAAACACCATGGCATGCCGACCGACATCGTGTCGGACAGAGACCCGCGCTTCACAGCGCACCTGTGGCAAGAAGTGTTTACACTTCTTGGGAGCCAGCTTTCCATGTCGACTGCGGATCATCCGCAGACGGACGGTCAAACCGAGCGCGTGAATCGCGTGCTCGTCGATATGTTGAAGAGCTACGCTCACTCGTTCCAATACTGGAGCGAGTGCTTATCGATGGCAGAGTTTGCCATCAATAACTCAGTGCATGCCTCGACCGGGCATACACCGTTCTACGTGAATGCCATGCGGCATCCACGTCTACCGAGTTTACTCGGAGTGATGGCTCCCACTTTAAGTGGGGGAGGATCTACGACTGCAATACAGCAGCCGCAGAAAACCGCTGACACTTGCACAGTGTCAGCTGCAACAATGGACAAACCACATGAGTCTGCGCAGGGCGCAGACTCCCCCAACAACAAGGCCAACGACCACGGGTCTGCGCAGGGCGCAGACACCGCAAAGAACCACGCAGAGGCCGGGCCTCTAGCGGAGAGCGAGCTGAATGACTTCAGCTCGGATGCAATCAGTTTCATCACCAAAAGACAAGCCGTGATTCGGTTTGTCCAAGACACAATAGCAGCTTCTGTTGATCAACAGAAGCTGAACGCAGACAATGCGGGCAGAGGCAACACAAATGAATTTAAAGTTGGTTCATTAGTTTTGTTAGCTACACAAAACCTGCCTAGACATGCAGTTTCGGATTTCGGAGCAAGCAAGCTTGCTCCGCGCTTCATCGGGCCGTTCACTGTGTTGGCACGGCACGGCAACGCATACACGCTAGACATACCGTCTAGCATGCGCCTCCATCCGACCTTTTACGTCGGACGGCTGAAGCCATACCTGCAGCACGAGCCATCTAGCTCGGCTGACCCGAAGCCTCGGCAGGAGCCGAGGCAGAAGCGGAGGACTTGGCCTCGGCGACGAGCAACCTCTCCTCCAGCGCGCGGACGCGCTGGAGCAACCCCTTCATCTGGGTCCCCAGCTCGACCTGGATATTCGAGGCGGTCTGCGAGACCGCCGCGACTTGGGCCTTCTGGTTCGCCAGCTCCTGTTTCAGGGCGGCGAACTCAGCGCCCTGCAGACGCTCCACGGCGGTCACCCGGTCGTGGAGAGGCGCATACTGATCAGCCCGGGGCTGATCATACCCGGGGCGTGTTCCCACCCCCGCCACCGCCGATCCGTGACGCCCGCGGCTCAACCCGCTGGATTGTTGAGCGGATTGTTGACCATAGTATCCCGAAAACGAACCCTCAAGGGGCTCGTTTTCGTATTCGTTGGAGAGGATTTCCTCCCCATCGAGATACATGGGAGCCGCGGAACGTCTTGCTGGAGGACGTTCCGGAAATGGTGAGGGCGTACGAGGAGCAGTACGCGCTGGCGCAGCGGAAGTAACACGAGCGCTGCGATCATCGCTAGCGCCCGAACCCTCACGTGCTAAGAACTTAGCACGGAGCTCTTTGAGACTCTCGGGCACACGGAACGACGTGTACCCGTTCAGGTCGCGGTCGCTCAAGCGGACCGCGCCTGGGAAGCACTTCGTGCACTGAAAGCCCTCGGGCACAGCGCACGGCACATTTGCCTCCTCAGCAGCAACATGAAGTTGCTCCAGCTTTCCACGCTTCGAGTACGTCTCGAAGCGATCACGCGCTTGCTTAATCCGATCACGGTAAGCACTC OLD KEY: TGCTCCAGCTTTCCACGCTTCGAGTACGTCTCGAA NEW KEY: CACGCGCTTGCTTAATCCGATCACGGTAAGCACTC ........ _A_ 0X00000000000XX0000X00X0000XX00X000000000000000XX000000XX0XXX20020000X40000 __114__ ........ _T_ 0000000XX00XX00X0000X00000X000000X00012X0XX0XX0000XX3X00000000000XX00000XXX __114__ ........ _G_ 000X0X000X00000000X00000XX000X00000XX000000X00X00X000000000008X080000060000 __114__ ........ _C_ X0X0X0X000X00000XX000X0X000000X0X0X00980X0000000000060X00X00000X000XX00X000 __114__ ........ _N_ 000000000000000000000000000000000000000000000000000000000000000000000000000 __114__ ........ ALL OOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOwwwwwwwwwwwwwwwwwwvvuuttsrqpppol __114__ ******** *** ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^**************************************** __114__ ######## CNS CACGCGCTTGCTTAATCCGATCACGGTAAGCACTCGGccTCTTGTTGAAGTTcTCAACAAAgGCgTTCCAgCTTT __114__ ######## QLT XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX++XXXXXXXXXXXXX!XXXXXXXX+XX+XXXXX!XXXX __114__ >CONSENSUS__114__ Length: 4564 [gain: 40] ATGGCGTCGAGGTGACGAAGGCGTGTCAACTCCGGGAGTTGACGCTGCAAACAGTGCGGACGGTTGCAAACGTACCGCACTGACGCAATTTGCATGCTGTCGTGCAGCCGGGCTGCACGACGAAGCGCCATGCGATCAAGCCGGGCTTGATATCGCGCGCCCGCAGACAGGGTCTGCCGGCGAAGGGACACATTACCGTGCAGCCGGGCTGCACGAAGGAAAATGCGGTCAAGCCGGGCTTGATACCGCGCGCCCGCGGACAGGGTCCGCCGGCGAACGACTGTCCACGGCCGGGCCTGGACCAGAAGAACAACTGTGCGGAGCCGGGCTCCGCACAACAAGAAGACGGCGCAAGCGGAAAACGCTGCGCAAGTCTCGGTCCGGGACCGAGACGCAACAAGAGCAGTCTGCTGGGCAGACTGCGGCGGTGACGCCGAATGTCAAGACGCTAAGCGTCTTGACGCGCACCGATACTGGATTCCAGTATCGTGACATGGAACTCGCTAGTCCTCCGACGACGGCGTCGGAGTTGACTTCGCTTCCAGCCATGAGCTGGAAGCGCTTCACGCGCGACTTGCACGATGGACGCATCGAGCAAGTCTGCGTTCTTTCGGACAGCGAAAGAACGGAGAGCGAGAGCGAAGAGCTGAGGCAGCTCTTCATGGGAAGTACCACTGAGAGTGAAGACACTCTCAGTGCGAAGACGAAGCGAGAGCGCTTCGAGGAACAAGGTTGGGACTCGCTGAAGTCGAGTCCCTATTACGAATTGTTGAGGGAGTACAAAGACGTACTCCCGGAAGAGATTCCTGCGGAGCTTCCGCAGGATAAGGGCATTCAGCACGAGATTGATCTCGTGCCGGGCACGAAGTACTGTGTCACGCGGCAGTGGCCACTGCCGCGAGAGCAAGTGAAAGCGATCGACGACTTCTTTGAAAGTCGTCGTAAAGCAGGACAAGTGCGGGAATCAAAGTCCCCGCACAGTGCTCCGACGTTCTGTGTCAAGAAGCCACAGGGCGGATGGCGCATCGTTCATGCCTACAACAAGCTGAACGATGCGACGGTACCGGCGCAGACGCCGATACCGCGAAAAGATGTTATCATCGATTCGATGGCCGGGAGCACCGTTTACAGTGCTCTCGACTTGCGAGATGGATTTTATCAAATCCTAATGCGTGAGAGCGATATCCCTCTCACGGCAGTGAGCACGCCAAGCGGCATGCTCTGGGAATGGCTAGTAATGCCACAGGGGCTTAAGAACGCCCCTGCGACTTTCAACAGGTGCGTGACGCACTTGTTGCGCTCGGTGCGCGACTTCGCACCGAGCTACTTCGATGATGTATTCATCCACAGCCGGGCTGTGGACGGGAAGACCGACGTAGAGATGCACAGGGTGCATCTCCGGAAGCTACTTGAGCTTATGCGAAAGCATAAGCTCTACGCGAACCTGAAGAAGTGTATCTTCGGGGCGAGCGAGATACCCGTCCTCGGGTGTCTCGTAGGGAAGAATGGTGTTCGCCCTGACCCGGAAAAGGTCAGAGTGATCAATGAATGGCCAACGCCTTCAAGTGTCAAGGAACTGAGGCAGTTCCTTGGCTTGGCCACGTACTTGTGCAAGTACGTGGAGGATTATGCGGGCAAGATCCGCCCGCTGTCACAGCTTCTTAAGAAAGAAGCTGTGTGGAATTGGACACCCGATTGCCAAAAGGCATTCGATGCAGTCAAGCGGGGCTTGACTGAGGCGCCGATCTTGGCAGTGGCTGACCAAGATCGCCCATTTCACGTAGTGTGTGACGCATCCGATTTCGCGATCGGATGCGCGTTGATGCAGCACGATCACGAGGGCCGTGATCGTGTCGTCTACTACCAATCGCGTCAGCTGAAGCCAGCTGAGCGCAACTATCCGGTGCATGACAAGGAACTCCTTGCCATGAAGTATGCACTCGCAAAGTTCCGAGTGTACTTGCTTGGGAGTAGACCATTTGTGGTCTACACCGACCATGCTTCACTGCGCACCGCAGTGAAGTCGCCACACATTTCACAAAGAATGGCGAGATGGCTCTCATTCTTTGCGGAGTATAACTTCCGGGTCGAATACAAACCCGGAAGATTGAACGTGGTGGCCGACGCGTTATCACGTCGGCCGGACTATGCAGAAGCTGTTGACGTCAATGCCATTGACGCCATGCGATCGAGCAAACCCACATCATCTCTGTTGGATGATGTGAAGGCCGCGTACGCGCACGACGCGGACGCGAAGCTCTTGCTGGCCTATGGCACAGCGCCTTCTGACAAGTCCCGTCAGAAGCTGCCCAAGCACCTTCGAGCGCGTGCACACCGCTTTCGTGTGCACGACGGACTACTGCTTTACAATGCAGTCGACGACAACGCGGATCGCGTTGTCGTGCCAAATGACCATGACCTGCGACTCAGGATCATGTACGAGTATCATGATGCCCCGACTGCGGGACATCTCGGACGTGAGAAGACTTACGTCCTTCTCACGCGCGACTTCTACTGGCACCACCAGTATAAGTGGGTGCGCAAGTACATCCGTGCTTGCGAGGTATGCCAACGCGTAAAGCCTGCGCCATTCGCGCAGGCTCCACTGCAATCACTACCGACTCCGTCGGAGTGTTGGAAGTCCATGTCTTTGGACTTCATCTTTGGTCTTCCCCCGGACAGCGGAGGGAATACCGGTGTTGTGGTCTTCGTCGACCGCTTCAGCAAGATGGTACATCTTGCTGCGGTGCCGGCAGAAGTGACCGCGAAGCAGACGGCCCGTCTGTTCGTCGACATGGTGTTCAAACACCATGGCATGCCGACCGACATCGTGTCGGACAGAGACCCGCGCTTCACAGCGCACCTGTGGCAAGAAGTGTTTACACTTCTTGGGAGCCAGCTTTCCATGTCGACTGCGGATCATCCGCAGACGGACGGTCAAACCGAGCGCGTGAATCGCGTGCTCGTCGATATGTTGAAGAGCTACGCTCACTCGTTCCAATACTGGAGCGAGTGCTTATCGATGGCAGAGTTTGCCATCAATAACTCAGTGCATGCCTCGACCGGGCATACACCGTTCTACGTGAATGCCATGCGGCATCCACGTCTACCGAGTTTACTCGGAGTGATGGCTCCCACTTTAAGTGGGGGAGGATCTACGACTGCAATACAGCAGCCGCAGAAAACCGCTGACACTTGCACAGTGTCAGCTGCAACAATGGACAAACCACATGAGTCTGCGCAGGGCGCAGACTCCCCCAACAACAAGGCCAACGACCACGGGTCTGCGCAGGGCGCAGACACCGCAAAGAACCACGCAGAGGCCGGGCCTCTAGCGGAGAGCGAGCTGAATGACTTCAGCTCGGATGCAATCAGTTTCATCACCAAAAGACAAGCCGTGATTCGGTTTGTCCAAGACACAATAGCAGCTTCTGTTGATCAACAGAAGCTGAACGCAGACAATGCGGGCAGAGGCAACACAAATGAATTTAAAGTTGGTTCATTAGTTTTGTTAGCTACACAAAACCTGCCTAGACATGCAGTTTCGGATTTCGGAGCAAGCAAGCTTGCTCCGCGCTTCATCGGGCCGTTCACTGTGTTGGCACGGCACGGCAACGCATACACGCTAGACATACCGTCTAGCATGCGCCTCCATCCGACCTTTTACGTCGGACGGCTGAAGCCATACCTGCAGCACGAGCCATCTAGCTCGGCTGACCCGAAGCCTCGGCAGGAGCCGAGGCAGAAGCGGAGGACTTGGCCTCGGCGACGAGCAACCTCTCCTCCAGCGCGCGGACGCGCTGGAGCAACCCCTTCATCTGGGTCCCCAGCTCGACCTGGATATTCGAGGCGGTCTGCGAGACCGCCGCGACTTGGGCCTTCTGGTTCGCCAGCTCCTGTTTCAGGGCGGCGAACTCAGCGCCCTGCAGACGCTCCACGGCGGTCACCCGGTCGTGGAGAGGCGCATACTGATCAGCCCGGGGCTGATCATACCCGGGGCGTGTTCCCACCCCCGCCACCGCCGATCCGTGACGCCCGCGGCTCAACCCGCTGGATTGTTGAGCGGATTGTTGACCATAGTATCCCGAAAACGAACCCTCAAGGGGCTCGTTTTCGTATTCGTTGGAGAGGATTTCCTCCCCATCGAGATACATGGGAGCCGCGGAACGTCTTGCTGGAGGACGTTCCGGAAATGGTGAGGGCGTACGAGGAGCAGTACGCGCTGGCGCAGCGGAAGTAACACGAGCGCTGCGATCATCGCTAGCGCCCGAACCCTCACGTGCTAAGAACTTAGCACGGAGCTCTTTGAGACTCTCGGGCACACGGAACGACGTGTACCCGTTCAGGTCGCGGTCGCTCAAGCGGACCGCGCCTGGGAAGCACTTCGTGCACTGAAAGCCCTCGGGCACAGCGCACGGCACATTTGCCTCCTCAGCAGCAACATGAAGTTGCTCCAGCTTTCCACGCTTCGAGTACGTCTCGAAGCGATCACGCGCTTGCTTAATCCGATCACGGTAAGCACTCGGCCTCTTGTTGAAGTTCTCAACAAAGGCGTTCCAGCTTT OLD KEY: CACGCGCTTGCTTAATCCGATCACGGTAAGCACTC NEW KEY: CTTGTTGAAGTTCTCAACAAAGGCGTTCCAGCTTT ........ _A_ 0000000XX000000XX0XXX00000000X000000X0XXX000000000X0000000X0000000000X0XX0X __115__ ........ _T_ 0XX0XX0000XX0X00000000000XX00000XXX0000000X000X00009X0000000XXX00X000000000 __115__ ........ _G_ 000X00X00X00000000000XX0X00000X0000X00000X0X000X000000XXX000000X00X0X0X00X0 __115__ ........ _C_ X00000000000X0X00X00000X000XX00X00000X000000XX00XX010X000X0X0000X00X0000000 __115__ ........ _N_ 000000000000000000000000000000000000000000000000000000000000000000000000000 __115__ ........ ALL wwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwvvvvuuuutttsssrrrrrqqqpppoooonmlkje __115__ ******** *** ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^**************************************** __115__ ######## CNS CTTGTTGAAGTTCTCAACAAAGGCGTTCCAGCTTTGACAAAGTGCCTGCCAtTCGGGCACTTTGCTGCGAGAAGA __115__ ######## QLT XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX+XXXXXXXXXXXXXXXXXXXXXXX __115__ >CONSENSUS__115__ Length: 4604 [gain: 40] ATGGCGTCGAGGTGACGAAGGCGTGTCAACTCCGGGAGTTGACGCTGCAAACAGTGCGGACGGTTGCAAACGTACCGCACTGACGCAATTTGCATGCTGTCGTGCAGCCGGGCTGCACGACGAAGCGCCATGCGATCAAGCCGGGCTTGATATCGCGCGCCCGCAGACAGGGTCTGCCGGCGAAGGGACACATTACCGTGCAGCCGGGCTGCACGAAGGAAAATGCGGTCAAGCCGGGCTTGATACCGCGCGCCCGCGGACAGGGTCCGCCGGCGAACGACTGTCCACGGCCGGGCCTGGACCAGAAGAACAACTGTGCGGAGCCGGGCTCCGCACAACAAGAAGACGGCGCAAGCGGAAAACGCTGCGCAAGTCTCGGTCCGGGACCGAGACGCAACAAGAGCAGTCTGCTGGGCAGACTGCGGCGGTGACGCCGAATGTCAAGACGCTAAGCGTCTTGACGCGCACCGATACTGGATTCCAGTATCGTGACATGGAACTCGCTAGTCCTCCGACGACGGCGTCGGAGTTGACTTCGCTTCCAGCCATGAGCTGGAAGCGCTTCACGCGCGACTTGCACGATGGACGCATCGAGCAAGTCTGCGTTCTTTCGGACAGCGAAAGAACGGAGAGCGAGAGCGAAGAGCTGAGGCAGCTCTTCATGGGAAGTACCACTGAGAGTGAAGACACTCTCAGTGCGAAGACGAAGCGAGAGCGCTTCGAGGAACAAGGTTGGGACTCGCTGAAGTCGAGTCCCTATTACGAATTGTTGAGGGAGTACAAAGACGTACTCCCGGAAGAGATTCCTGCGGAGCTTCCGCAGGATAAGGGCATTCAGCACGAGATTGATCTCGTGCCGGGCACGAAGTACTGTGTCACGCGGCAGTGGCCACTGCCGCGAGAGCAAGTGAAAGCGATCGACGACTTCTTTGAAAGTCGTCGTAAAGCAGGACAAGTGCGGGAATCAAAGTCCCCGCACAGTGCTCCGACGTTCTGTGTCAAGAAGCCACAGGGCGGATGGCGCATCGTTCATGCCTACAACAAGCTGAACGATGCGACGGTACCGGCGCAGACGCCGATACCGCGAAAAGATGTTATCATCGATTCGATGGCCGGGAGCACCGTTTACAGTGCTCTCGACTTGCGAGATGGATTTTATCAAATCCTAATGCGTGAGAGCGATATCCCTCTCACGGCAGTGAGCACGCCAAGCGGCATGCTCTGGGAATGGCTAGTAATGCCACAGGGGCTTAAGAACGCCCCTGCGACTTTCAACAGGTGCGTGACGCACTTGTTGCGCTCGGTGCGCGACTTCGCACCGAGCTACTTCGATGATGTATTCATCCACAGCCGGGCTGTGGACGGGAAGACCGACGTAGAGATGCACAGGGTGCATCTCCGGAAGCTACTTGAGCTTATGCGAAAGCATAAGCTCTACGCGAACCTGAAGAAGTGTATCTTCGGGGCGAGCGAGATACCCGTCCTCGGGTGTCTCGTAGGGAAGAATGGTGTTCGCCCTGACCCGGAAAAGGTCAGAGTGATCAATGAATGGCCAACGCCTTCAAGTGTCAAGGAACTGAGGCAGTTCCTTGGCTTGGCCACGTACTTGTGCAAGTACGTGGAGGATTATGCGGGCAAGATCCGCCCGCTGTCACAGCTTCTTAAGAAAGAAGCTGTGTGGAATTGGACACCCGATTGCCAAAAGGCATTCGATGCAGTCAAGCGGGGCTTGACTGAGGCGCCGATCTTGGCAGTGGCTGACCAAGATCGCCCATTTCACGTAGTGTGTGACGCATCCGATTTCGCGATCGGATGCGCGTTGATGCAGCACGATCACGAGGGCCGTGATCGTGTCGTCTACTACCAATCGCGTCAGCTGAAGCCAGCTGAGCGCAACTATCCGGTGCATGACAAGGAACTCCTTGCCATGAAGTATGCACTCGCAAAGTTCCGAGTGTACTTGCTTGGGAGTAGACCATTTGTGGTCTACACCGACCATGCTTCACTGCGCACCGCAGTGAAGTCGCCACACATTTCACAAAGAATGGCGAGATGGCTCTCATTCTTTGCGGAGTATAACTTCCGGGTCGAATACAAACCCGGAAGATTGAACGTGGTGGCCGACGCGTTATCACGTCGGCCGGACTATGCAGAAGCTGTTGACGTCAATGCCATTGACGCCATGCGATCGAGCAAACCCACATCATCTCTGTTGGATGATGTGAAGGCCGCGTACGCGCACGACGCGGACGCGAAGCTCTTGCTGGCCTATGGCACAGCGCCTTCTGACAAGTCCCGTCAGAAGCTGCCCAAGCACCTTCGAGCGCGTGCACACCGCTTTCGTGTGCACGACGGACTACTGCTTTACAATGCAGTCGACGACAACGCGGATCGCGTTGTCGTGCCAAATGACCATGACCTGCGACTCAGGATCATGTACGAGTATCATGATGCCCCGACTGCGGGACATCTCGGACGTGAGAAGACTTACGTCCTTCTCACGCGCGACTTCTACTGGCACCACCAGTATAAGTGGGTGCGCAAGTACATCCGTGCTTGCGAGGTATGCCAACGCGTAAAGCCTGCGCCATTCGCGCAGGCTCCACTGCAATCACTACCGACTCCGTCGGAGTGTTGGAAGTCCATGTCTTTGGACTTCATCTTTGGTCTTCCCCCGGACAGCGGAGGGAATACCGGTGTTGTGGTCTTCGTCGACCGCTTCAGCAAGATGGTACATCTTGCTGCGGTGCCGGCAGAAGTGACCGCGAAGCAGACGGCCCGTCTGTTCGTCGACATGGTGTTCAAACACCATGGCATGCCGACCGACATCGTGTCGGACAGAGACCCGCGCTTCACAGCGCACCTGTGGCAAGAAGTGTTTACACTTCTTGGGAGCCAGCTTTCCATGTCGACTGCGGATCATCCGCAGACGGACGGTCAAACCGAGCGCGTGAATCGCGTGCTCGTCGATATGTTGAAGAGCTACGCTCACTCGTTCCAATACTGGAGCGAGTGCTTATCGATGGCAGAGTTTGCCATCAATAACTCAGTGCATGCCTCGACCGGGCATACACCGTTCTACGTGAATGCCATGCGGCATCCACGTCTACCGAGTTTACTCGGAGTGATGGCTCCCACTTTAAGTGGGGGAGGATCTACGACTGCAATACAGCAGCCGCAGAAAACCGCTGACACTTGCACAGTGTCAGCTGCAACAATGGACAAACCACATGAGTCTGCGCAGGGCGCAGACTCCCCCAACAACAAGGCCAACGACCACGGGTCTGCGCAGGGCGCAGACACCGCAAAGAACCACGCAGAGGCCGGGCCTCTAGCGGAGAGCGAGCTGAATGACTTCAGCTCGGATGCAATCAGTTTCATCACCAAAAGACAAGCCGTGATTCGGTTTGTCCAAGACACAATAGCAGCTTCTGTTGATCAACAGAAGCTGAACGCAGACAATGCGGGCAGAGGCAACACAAATGAATTTAAAGTTGGTTCATTAGTTTTGTTAGCTACACAAAACCTGCCTAGACATGCAGTTTCGGATTTCGGAGCAAGCAAGCTTGCTCCGCGCTTCATCGGGCCGTTCACTGTGTTGGCACGGCACGGCAACGCATACACGCTAGACATACCGTCTAGCATGCGCCTCCATCCGACCTTTTACGTCGGACGGCTGAAGCCATACCTGCAGCACGAGCCATCTAGCTCGGCTGACCCGAAGCCTCGGCAGGAGCCGAGGCAGAAGCGGAGGACTTGGCCTCGGCGACGAGCAACCTCTCCTCCAGCGCGCGGACGCGCTGGAGCAACCCCTTCATCTGGGTCCCCAGCTCGACCTGGATATTCGAGGCGGTCTGCGAGACCGCCGCGACTTGGGCCTTCTGGTTCGCCAGCTCCTGTTTCAGGGCGGCGAACTCAGCGCCCTGCAGACGCTCCACGGCGGTCACCCGGTCGTGGAGAGGCGCATACTGATCAGCCCGGGGCTGATCATACCCGGGGCGTGTTCCCACCCCCGCCACCGCCGATCCGTGACGCCCGCGGCTCAACCCGCTGGATTGTTGAGCGGATTGTTGACCATAGTATCCCGAAAACGAACCCTCAAGGGGCTCGTTTTCGTATTCGTTGGAGAGGATTTCCTCCCCATCGAGATACATGGGAGCCGCGGAACGTCTTGCTGGAGGACGTTCCGGAAATGGTGAGGGCGTACGAGGAGCAGTACGCGCTGGCGCAGCGGAAGTAACACGAGCGCTGCGATCATCGCTAGCGCCCGAACCCTCACGTGCTAAGAACTTAGCACGGAGCTCTTTGAGACTCTCGGGCACACGGAACGACGTGTACCCGTTCAGGTCGCGGTCGCTCAAGCGGACCGCGCCTGGGAAGCACTTCGTGCACTGAAAGCCCTCGGGCACAGCGCACGGCACATTTGCCTCCTCAGCAGCAACATGAAGTTGCTCCAGCTTTCCACGCTTCGAGTACGTCTCGAAGCGATCACGCGCTTGCTTAATCCGATCACGGTAAGCACTCGGCCTCTTGTTGAAGTTCTCAACAAAGGCGTTCCAGCTTTGACAAAGTGCCTGCCATTCGGGCACTTTGCTGCGAGAAGA OLD KEY: CTTGTTGAAGTTCTCAACAAAGGCGTTCCAGCTTT NEW KEY: AGTGCCTGCCATTCGGGCACTTTGCTGCGAGAAGA ........ _A_ X000000000X0000000X0000000000X0XX0X000000000000000XXX00X0000X0000X009XX0900 __116__ ........ _T_ 00X000X0000XX0000000XXX00X00000000020X0XX0XX00XXX0000000X000000X00X0000000X __116__ ........ _G_ 0X0X000X000000XXX000000X00X0X0X00X08X0000000X0000X00000000XX0X00000X100X0X0 __116__ ........ _C_ 0000XX00XX000X000X0X0000X00X0000000000X00X000X0000000XX00X0000X0X0000000000 __116__ ........ _N_ 000000000000000000000000000000000000000000000000000000000000000000000000000 __116__ ........ ALL wwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwvvuuttsssrrrqqppooomj __116__ ******** *** ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^**************************************** __116__ ######## CNS AGTGCCTGCCATTCGGGCACTTTGCTGCGAGAAGAgGTCTTCTTGCTTTGAAACCATCGGAGCTCATGaAAGaGT __116__ ######## QLT XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX+XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX+XXX+XX __116__ >CONSENSUS__116__ Length: 4644 [gain: 40] ATGGCGTCGAGGTGACGAAGGCGTGTCAACTCCGGGAGTTGACGCTGCAAACAGTGCGGACGGTTGCAAACGTACCGCACTGACGCAATTTGCATGCTGTCGTGCAGCCGGGCTGCACGACGAAGCGCCATGCGATCAAGCCGGGCTTGATATCGCGCGCCCGCAGACAGGGTCTGCCGGCGAAGGGACACATTACCGTGCAGCCGGGCTGCACGAAGGAAAATGCGGTCAAGCCGGGCTTGATACCGCGCGCCCGCGGACAGGGTCCGCCGGCGAACGACTGTCCACGGCCGGGCCTGGACCAGAAGAACAACTGTGCGGAGCCGGGCTCCGCACAACAAGAAGACGGCGCAAGCGGAAAACGCTGCGCAAGTCTCGGTCCGGGACCGAGACGCAACAAGAGCAGTCTGCTGGGCAGACTGCGGCGGTGACGCCGAATGTCAAGACGCTAAGCGTCTTGACGCGCACCGATACTGGATTCCAGTATCGTGACATGGAACTCGCTAGTCCTCCGACGACGGCGTCGGAGTTGACTTCGCTTCCAGCCATGAGCTGGAAGCGCTTCACGCGCGACTTGCACGATGGACGCATCGAGCAAGTCTGCGTTCTTTCGGACAGCGAAAGAACGGAGAGCGAGAGCGAAGAGCTGAGGCAGCTCTTCATGGGAAGTACCACTGAGAGTGAAGACACTCTCAGTGCGAAGACGAAGCGAGAGCGCTTCGAGGAACAAGGTTGGGACTCGCTGAAGTCGAGTCCCTATTACGAATTGTTGAGGGAGTACAAAGACGTACTCCCGGAAGAGATTCCTGCGGAGCTTCCGCAGGATAAGGGCATTCAGCACGAGATTGATCTCGTGCCGGGCACGAAGTACTGTGTCACGCGGCAGTGGCCACTGCCGCGAGAGCAAGTGAAAGCGATCGACGACTTCTTTGAAAGTCGTCGTAAAGCAGGACAAGTGCGGGAATCAAAGTCCCCGCACAGTGCTCCGACGTTCTGTGTCAAGAAGCCACAGGGCGGATGGCGCATCGTTCATGCCTACAACAAGCTGAACGATGCGACGGTACCGGCGCAGACGCCGATACCGCGAAAAGATGTTATCATCGATTCGATGGCCGGGAGCACCGTTTACAGTGCTCTCGACTTGCGAGATGGATTTTATCAAATCCTAATGCGTGAGAGCGATATCCCTCTCACGGCAGTGAGCACGCCAAGCGGCATGCTCTGGGAATGGCTAGTAATGCCACAGGGGCTTAAGAACGCCCCTGCGACTTTCAACAGGTGCGTGACGCACTTGTTGCGCTCGGTGCGCGACTTCGCACCGAGCTACTTCGATGATGTATTCATCCACAGCCGGGCTGTGGACGGGAAGACCGACGTAGAGATGCACAGGGTGCATCTCCGGAAGCTACTTGAGCTTATGCGAAAGCATAAGCTCTACGCGAACCTGAAGAAGTGTATCTTCGGGGCGAGCGAGATACCCGTCCTCGGGTGTCTCGTAGGGAAGAATGGTGTTCGCCCTGACCCGGAAAAGGTCAGAGTGATCAATGAATGGCCAACGCCTTCAAGTGTCAAGGAACTGAGGCAGTTCCTTGGCTTGGCCACGTACTTGTGCAAGTACGTGGAGGATTATGCGGGCAAGATCCGCCCGCTGTCACAGCTTCTTAAGAAAGAAGCTGTGTGGAATTGGACACCCGATTGCCAAAAGGCATTCGATGCAGTCAAGCGGGGCTTGACTGAGGCGCCGATCTTGGCAGTGGCTGACCAAGATCGCCCATTTCACGTAGTGTGTGACGCATCCGATTTCGCGATCGGATGCGCGTTGATGCAGCACGATCACGAGGGCCGTGATCGTGTCGTCTACTACCAATCGCGTCAGCTGAAGCCAGCTGAGCGCAACTATCCGGTGCATGACAAGGAACTCCTTGCCATGAAGTATGCACTCGCAAAGTTCCGAGTGTACTTGCTTGGGAGTAGACCATTTGTGGTCTACACCGACCATGCTTCACTGCGCACCGCAGTGAAGTCGCCACACATTTCACAAAGAATGGCGAGATGGCTCTCATTCTTTGCGGAGTATAACTTCCGGGTCGAATACAAACCCGGAAGATTGAACGTGGTGGCCGACGCGTTATCACGTCGGCCGGACTATGCAGAAGCTGTTGACGTCAATGCCATTGACGCCATGCGATCGAGCAAACCCACATCATCTCTGTTGGATGATGTGAAGGCCGCGTACGCGCACGACGCGGACGCGAAGCTCTTGCTGGCCTATGGCACAGCGCCTTCTGACAAGTCCCGTCAGAAGCTGCCCAAGCACCTTCGAGCGCGTGCACACCGCTTTCGTGTGCACGACGGACTACTGCTTTACAATGCAGTCGACGACAACGCGGATCGCGTTGTCGTGCCAAATGACCATGACCTGCGACTCAGGATCATGTACGAGTATCATGATGCCCCGACTGCGGGACATCTCGGACGTGAGAAGACTTACGTCCTTCTCACGCGCGACTTCTACTGGCACCACCAGTATAAGTGGGTGCGCAAGTACATCCGTGCTTGCGAGGTATGCCAACGCGTAAAGCCTGCGCCATTCGCGCAGGCTCCACTGCAATCACTACCGACTCCGTCGGAGTGTTGGAAGTCCATGTCTTTGGACTTCATCTTTGGTCTTCCCCCGGACAGCGGAGGGAATACCGGTGTTGTGGTCTTCGTCGACCGCTTCAGCAAGATGGTACATCTTGCTGCGGTGCCGGCAGAAGTGACCGCGAAGCAGACGGCCCGTCTGTTCGTCGACATGGTGTTCAAACACCATGGCATGCCGACCGACATCGTGTCGGACAGAGACCCGCGCTTCACAGCGCACCTGTGGCAAGAAGTGTTTACACTTCTTGGGAGCCAGCTTTCCATGTCGACTGCGGATCATCCGCAGACGGACGGTCAAACCGAGCGCGTGAATCGCGTGCTCGTCGATATGTTGAAGAGCTACGCTCACTCGTTCCAATACTGGAGCGAGTGCTTATCGATGGCAGAGTTTGCCATCAATAACTCAGTGCATGCCTCGACCGGGCATACACCGTTCTACGTGAATGCCATGCGGCATCCACGTCTACCGAGTTTACTCGGAGTGATGGCTCCCACTTTAAGTGGGGGAGGATCTACGACTGCAATACAGCAGCCGCAGAAAACCGCTGACACTTGCACAGTGTCAGCTGCAACAATGGACAAACCACATGAGTCTGCGCAGGGCGCAGACTCCCCCAACAACAAGGCCAACGACCACGGGTCTGCGCAGGGCGCAGACACCGCAAAGAACCACGCAGAGGCCGGGCCTCTAGCGGAGAGCGAGCTGAATGACTTCAGCTCGGATGCAATCAGTTTCATCACCAAAAGACAAGCCGTGATTCGGTTTGTCCAAGACACAATAGCAGCTTCTGTTGATCAACAGAAGCTGAACGCAGACAATGCGGGCAGAGGCAACACAAATGAATTTAAAGTTGGTTCATTAGTTTTGTTAGCTACACAAAACCTGCCTAGACATGCAGTTTCGGATTTCGGAGCAAGCAAGCTTGCTCCGCGCTTCATCGGGCCGTTCACTGTGTTGGCACGGCACGGCAACGCATACACGCTAGACATACCGTCTAGCATGCGCCTCCATCCGACCTTTTACGTCGGACGGCTGAAGCCATACCTGCAGCACGAGCCATCTAGCTCGGCTGACCCGAAGCCTCGGCAGGAGCCGAGGCAGAAGCGGAGGACTTGGCCTCGGCGACGAGCAACCTCTCCTCCAGCGCGCGGACGCGCTGGAGCAACCCCTTCATCTGGGTCCCCAGCTCGACCTGGATATTCGAGGCGGTCTGCGAGACCGCCGCGACTTGGGCCTTCTGGTTCGCCAGCTCCTGTTTCAGGGCGGCGAACTCAGCGCCCTGCAGACGCTCCACGGCGGTCACCCGGTCGTGGAGAGGCGCATACTGATCAGCCCGGGGCTGATCATACCCGGGGCGTGTTCCCACCCCCGCCACCGCCGATCCGTGACGCCCGCGGCTCAACCCGCTGGATTGTTGAGCGGATTGTTGACCATAGTATCCCGAAAACGAACCCTCAAGGGGCTCGTTTTCGTATTCGTTGGAGAGGATTTCCTCCCCATCGAGATACATGGGAGCCGCGGAACGTCTTGCTGGAGGACGTTCCGGAAATGGTGAGGGCGTACGAGGAGCAGTACGCGCTGGCGCAGCGGAAGTAACACGAGCGCTGCGATCATCGCTAGCGCCCGAACCCTCACGTGCTAAGAACTTAGCACGGAGCTCTTTGAGACTCTCGGGCACACGGAACGACGTGTACCCGTTCAGGTCGCGGTCGCTCAAGCGGACCGCGCCTGGGAAGCACTTCGTGCACTGAAAGCCCTCGGGCACAGCGCACGGCACATTTGCCTCCTCAGCAGCAACATGAAGTTGCTCCAGCTTTCCACGCTTCGAGTACGTCTCGAAGCGATCACGCGCTTGCTTAATCCGATCACGGTAAGCACTCGGCCTCTTGTTGAAGTTCTCAACAAAGGCGTTCCAGCTTTGACAAAGTGCCTGCCATTCGGGCACTTTGCTGCGAGAAGAGGTCTTCTTGCTTTGAAACCATCGGAGCTCATGAAAGAGT OLD KEY: AGTGCCTGCCATTCGGGCACTTTGCTGCGAGAAGA NEW KEY: TCTTGCTTTGAAACCATCGGAGCTCATGAAAGAGT ........ _A_ 0000000000XXX00X0000X0000X00XXX0X00000X000X10XX00000000000X00000000000X009X __117__ ........ _T_ X0XX00XXX0000000X000000X00X0000000X0000X0X00X00X000000XXX00X000X9X00000X000 __117__ ........ _G_ 0000X0000X00000000XX0X00000X000X0X000X00X00900000X0X00000X00X0X00000X000000 __117__ ........ _C_ 0X000X0000000XX00X0000X0X0000000000XX00000000000X0X0XX0000000X0000XX0X00X00 __117__ ........ _N_ 000000000000000000000000000000000000000000000000000000000000000000000000000 __117__ ........ ALL OOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOwwwwwwwwwwwwwwwwwwvvuuttssrqqpooolkf __117__ ******** *** ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^**************************************** __117__ ######## CNS TCTTGCTTTGAAACCATCGGAGCTCATGAAAGAGTCCGATGTAgTAATCGCGCCTTTGATGCGTtTCCGCATCaA __117__ ######## QLT XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX+XXXXXXXXXXXXXXXXXXXX+XXXXXXXX+X __117__ >CONSENSUS__117__ Length: 4684 [gain: 40] ATGGCGTCGAGGTGACGAAGGCGTGTCAACTCCGGGAGTTGACGCTGCAAACAGTGCGGACGGTTGCAAACGTACCGCACTGACGCAATTTGCATGCTGTCGTGCAGCCGGGCTGCACGACGAAGCGCCATGCGATCAAGCCGGGCTTGATATCGCGCGCCCGCAGACAGGGTCTGCCGGCGAAGGGACACATTACCGTGCAGCCGGGCTGCACGAAGGAAAATGCGGTCAAGCCGGGCTTGATACCGCGCGCCCGCGGACAGGGTCCGCCGGCGAACGACTGTCCACGGCCGGGCCTGGACCAGAAGAACAACTGTGCGGAGCCGGGCTCCGCACAACAAGAAGACGGCGCAAGCGGAAAACGCTGCGCAAGTCTCGGTCCGGGACCGAGACGCAACAAGAGCAGTCTGCTGGGCAGACTGCGGCGGTGACGCCGAATGTCAAGACGCTAAGCGTCTTGACGCGCACCGATACTGGATTCCAGTATCGTGACATGGAACTCGCTAGTCCTCCGACGACGGCGTCGGAGTTGACTTCGCTTCCAGCCATGAGCTGGAAGCGCTTCACGCGCGACTTGCACGATGGACGCATCGAGCAAGTCTGCGTTCTTTCGGACAGCGAAAGAACGGAGAGCGAGAGCGAAGAGCTGAGGCAGCTCTTCATGGGAAGTACCACTGAGAGTGAAGACACTCTCAGTGCGAAGACGAAGCGAGAGCGCTTCGAGGAACAAGGTTGGGACTCGCTGAAGTCGAGTCCCTATTACGAATTGTTGAGGGAGTACAAAGACGTACTCCCGGAAGAGATTCCTGCGGAGCTTCCGCAGGATAAGGGCATTCAGCACGAGATTGATCTCGTGCCGGGCACGAAGTACTGTGTCACGCGGCAGTGGCCACTGCCGCGAGAGCAAGTGAAAGCGATCGACGACTTCTTTGAAAGTCGTCGTAAAGCAGGACAAGTGCGGGAATCAAAGTCCCCGCACAGTGCTCCGACGTTCTGTGTCAAGAAGCCACAGGGCGGATGGCGCATCGTTCATGCCTACAACAAGCTGAACGATGCGACGGTACCGGCGCAGACGCCGATACCGCGAAAAGATGTTATCATCGATTCGATGGCCGGGAGCACCGTTTACAGTGCTCTCGACTTGCGAGATGGATTTTATCAAATCCTAATGCGTGAGAGCGATATCCCTCTCACGGCAGTGAGCACGCCAAGCGGCATGCTCTGGGAATGGCTAGTAATGCCACAGGGGCTTAAGAACGCCCCTGCGACTTTCAACAGGTGCGTGACGCACTTGTTGCGCTCGGTGCGCGACTTCGCACCGAGCTACTTCGATGATGTATTCATCCACAGCCGGGCTGTGGACGGGAAGACCGACGTAGAGATGCACAGGGTGCATCTCCGGAAGCTACTTGAGCTTATGCGAAAGCATAAGCTCTACGCGAACCTGAAGAAGTGTATCTTCGGGGCGAGCGAGATACCCGTCCTCGGGTGTCTCGTAGGGAAGAATGGTGTTCGCCCTGACCCGGAAAAGGTCAGAGTGATCAATGAATGGCCAACGCCTTCAAGTGTCAAGGAACTGAGGCAGTTCCTTGGCTTGGCCACGTACTTGTGCAAGTACGTGGAGGATTATGCGGGCAAGATCCGCCCGCTGTCACAGCTTCTTAAGAAAGAAGCTGTGTGGAATTGGACACCCGATTGCCAAAAGGCATTCGATGCAGTCAAGCGGGGCTTGACTGAGGCGCCGATCTTGGCAGTGGCTGACCAAGATCGCCCATTTCACGTAGTGTGTGACGCATCCGATTTCGCGATCGGATGCGCGTTGATGCAGCACGATCACGAGGGCCGTGATCGTGTCGTCTACTACCAATCGCGTCAGCTGAAGCCAGCTGAGCGCAACTATCCGGTGCATGACAAGGAACTCCTTGCCATGAAGTATGCACTCGCAAAGTTCCGAGTGTACTTGCTTGGGAGTAGACCATTTGTGGTCTACACCGACCATGCTTCACTGCGCACCGCAGTGAAGTCGCCACACATTTCACAAAGAATGGCGAGATGGCTCTCATTCTTTGCGGAGTATAACTTCCGGGTCGAATACAAACCCGGAAGATTGAACGTGGTGGCCGACGCGTTATCACGTCGGCCGGACTATGCAGAAGCTGTTGACGTCAATGCCATTGACGCCATGCGATCGAGCAAACCCACATCATCTCTGTTGGATGATGTGAAGGCCGCGTACGCGCACGACGCGGACGCGAAGCTCTTGCTGGCCTATGGCACAGCGCCTTCTGACAAGTCCCGTCAGAAGCTGCCCAAGCACCTTCGAGCGCGTGCACACCGCTTTCGTGTGCACGACGGACTACTGCTTTACAATGCAGTCGACGACAACGCGGATCGCGTTGTCGTGCCAAATGACCATGACCTGCGACTCAGGATCATGTACGAGTATCATGATGCCCCGACTGCGGGACATCTCGGACGTGAGAAGACTTACGTCCTTCTCACGCGCGACTTCTACTGGCACCACCAGTATAAGTGGGTGCGCAAGTACATCCGTGCTTGCGAGGTATGCCAACGCGTAAAGCCTGCGCCATTCGCGCAGGCTCCACTGCAATCACTACCGACTCCGTCGGAGTGTTGGAAGTCCATGTCTTTGGACTTCATCTTTGGTCTTCCCCCGGACAGCGGAGGGAATACCGGTGTTGTGGTCTTCGTCGACCGCTTCAGCAAGATGGTACATCTTGCTGCGGTGCCGGCAGAAGTGACCGCGAAGCAGACGGCCCGTCTGTTCGTCGACATGGTGTTCAAACACCATGGCATGCCGACCGACATCGTGTCGGACAGAGACCCGCGCTTCACAGCGCACCTGTGGCAAGAAGTGTTTACACTTCTTGGGAGCCAGCTTTCCATGTCGACTGCGGATCATCCGCAGACGGACGGTCAAACCGAGCGCGTGAATCGCGTGCTCGTCGATATGTTGAAGAGCTACGCTCACTCGTTCCAATACTGGAGCGAGTGCTTATCGATGGCAGAGTTTGCCATCAATAACTCAGTGCATGCCTCGACCGGGCATACACCGTTCTACGTGAATGCCATGCGGCATCCACGTCTACCGAGTTTACTCGGAGTGATGGCTCCCACTTTAAGTGGGGGAGGATCTACGACTGCAATACAGCAGCCGCAGAAAACCGCTGACACTTGCACAGTGTCAGCTGCAACAATGGACAAACCACATGAGTCTGCGCAGGGCGCAGACTCCCCCAACAACAAGGCCAACGACCACGGGTCTGCGCAGGGCGCAGACACCGCAAAGAACCACGCAGAGGCCGGGCCTCTAGCGGAGAGCGAGCTGAATGACTTCAGCTCGGATGCAATCAGTTTCATCACCAAAAGACAAGCCGTGATTCGGTTTGTCCAAGACACAATAGCAGCTTCTGTTGATCAACAGAAGCTGAACGCAGACAATGCGGGCAGAGGCAACACAAATGAATTTAAAGTTGGTTCATTAGTTTTGTTAGCTACACAAAACCTGCCTAGACATGCAGTTTCGGATTTCGGAGCAAGCAAGCTTGCTCCGCGCTTCATCGGGCCGTTCACTGTGTTGGCACGGCACGGCAACGCATACACGCTAGACATACCGTCTAGCATGCGCCTCCATCCGACCTTTTACGTCGGACGGCTGAAGCCATACCTGCAGCACGAGCCATCTAGCTCGGCTGACCCGAAGCCTCGGCAGGAGCCGAGGCAGAAGCGGAGGACTTGGCCTCGGCGACGAGCAACCTCTCCTCCAGCGCGCGGACGCGCTGGAGCAACCCCTTCATCTGGGTCCCCAGCTCGACCTGGATATTCGAGGCGGTCTGCGAGACCGCCGCGACTTGGGCCTTCTGGTTCGCCAGCTCCTGTTTCAGGGCGGCGAACTCAGCGCCCTGCAGACGCTCCACGGCGGTCACCCGGTCGTGGAGAGGCGCATACTGATCAGCCCGGGGCTGATCATACCCGGGGCGTGTTCCCACCCCCGCCACCGCCGATCCGTGACGCCCGCGGCTCAACCCGCTGGATTGTTGAGCGGATTGTTGACCATAGTATCCCGAAAACGAACCCTCAAGGGGCTCGTTTTCGTATTCGTTGGAGAGGATTTCCTCCCCATCGAGATACATGGGAGCCGCGGAACGTCTTGCTGGAGGACGTTCCGGAAATGGTGAGGGCGTACGAGGAGCAGTACGCGCTGGCGCAGCGGAAGTAACACGAGCGCTGCGATCATCGCTAGCGCCCGAACCCTCACGTGCTAAGAACTTAGCACGGAGCTCTTTGAGACTCTCGGGCACACGGAACGACGTGTACCCGTTCAGGTCGCGGTCGCTCAAGCGGACCGCGCCTGGGAAGCACTTCGTGCACTGAAAGCCCTCGGGCACAGCGCACGGCACATTTGCCTCCTCAGCAGCAACATGAAGTTGCTCCAGCTTTCCACGCTTCGAGTACGTCTCGAAGCGATCACGCGCTTGCTTAATCCGATCACGGTAAGCACTCGGCCTCTTGTTGAAGTTCTCAACAAAGGCGTTCCAGCTTTGACAAAGTGCCTGCCATTCGGGCACTTTGCTGCGAGAAGAGGTCTTCTTGCTTTGAAACCATCGGAGCTCATGAAAGAGTCCGATGTAGTAATCGCGCCTTTGATGCGTTTCCGCATCAA OLD KEY: TCTTGCTTTGAAACCATCGGAGCTCATGAAAGAGT NEW KEY: GTAGTAATCGCGCCTTTGATGCGTTTCCGCATCAA ........ _A_ 00X00XX00000000000X00000000000X00XXX0000X0000100X000X0900000X000000X0000000 __118__ ........ _T_ 0X00X00X000000XXX00X000XXX00000X00000X00000X00000000000000900X0XXX00X00000X __118__ ........ _G_ X00X00000X0X00000X00X0X00000X0000000X0X00X0009X00X00001X0X00000000X00XX0X00 __118__ ........ _C_ 00000000X0X0XX0000000X0000XX0X00X000000X00X0X00X00XX0X00X00X00X00000000X0X0 __118__ ........ _N_ 000000000000000000000000000000000000000000000000000000000000000000000000000 __118__ ........ ALL wwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwvvvuuuttsssrqqppooonlj __118__ ******** *** ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^**************************************** __118__ ######## CNS GTAGTAATCGCGCCTTTGATGCGTTTCCGCATCAAAGTGCAGCTCgGCAGCCACaGCGtCATCTTTGATGGCGCT __118__ ######## QLT XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX+XXXXXXXX+XXX+XXXXXXXXXXXXXXXX __118__ >CONSENSUS__118__ Length: 4724 [gain: 40] ATGGCGTCGAGGTGACGAAGGCGTGTCAACTCCGGGAGTTGACGCTGCAAACAGTGCGGACGGTTGCAAACGTACCGCACTGACGCAATTTGCATGCTGTCGTGCAGCCGGGCTGCACGACGAAGCGCCATGCGATCAAGCCGGGCTTGATATCGCGCGCCCGCAGACAGGGTCTGCCGGCGAAGGGACACATTACCGTGCAGCCGGGCTGCACGAAGGAAAATGCGGTCAAGCCGGGCTTGATACCGCGCGCCCGCGGACAGGGTCCGCCGGCGAACGACTGTCCACGGCCGGGCCTGGACCAGAAGAACAACTGTGCGGAGCCGGGCTCCGCACAACAAGAAGACGGCGCAAGCGGAAAACGCTGCGCAAGTCTCGGTCCGGGACCGAGACGCAACAAGAGCAGTCTGCTGGGCAGACTGCGGCGGTGACGCCGAATGTCAAGACGCTAAGCGTCTTGACGCGCACCGATACTGGATTCCAGTATCGTGACATGGAACTCGCTAGTCCTCCGACGACGGCGTCGGAGTTGACTTCGCTTCCAGCCATGAGCTGGAAGCGCTTCACGCGCGACTTGCACGATGGACGCATCGAGCAAGTCTGCGTTCTTTCGGACAGCGAAAGAACGGAGAGCGAGAGCGAAGAGCTGAGGCAGCTCTTCATGGGAAGTACCACTGAGAGTGAAGACACTCTCAGTGCGAAGACGAAGCGAGAGCGCTTCGAGGAACAAGGTTGGGACTCGCTGAAGTCGAGTCCCTATTACGAATTGTTGAGGGAGTACAAAGACGTACTCCCGGAAGAGATTCCTGCGGAGCTTCCGCAGGATAAGGGCATTCAGCACGAGATTGATCTCGTGCCGGGCACGAAGTACTGTGTCACGCGGCAGTGGCCACTGCCGCGAGAGCAAGTGAAAGCGATCGACGACTTCTTTGAAAGTCGTCGTAAAGCAGGACAAGTGCGGGAATCAAAGTCCCCGCACAGTGCTCCGACGTTCTGTGTCAAGAAGCCACAGGGCGGATGGCGCATCGTTCATGCCTACAACAAGCTGAACGATGCGACGGTACCGGCGCAGACGCCGATACCGCGAAAAGATGTTATCATCGATTCGATGGCCGGGAGCACCGTTTACAGTGCTCTCGACTTGCGAGATGGATTTTATCAAATCCTAATGCGTGAGAGCGATATCCCTCTCACGGCAGTGAGCACGCCAAGCGGCATGCTCTGGGAATGGCTAGTAATGCCACAGGGGCTTAAGAACGCCCCTGCGACTTTCAACAGGTGCGTGACGCACTTGTTGCGCTCGGTGCGCGACTTCGCACCGAGCTACTTCGATGATGTATTCATCCACAGCCGGGCTGTGGACGGGAAGACCGACGTAGAGATGCACAGGGTGCATCTCCGGAAGCTACTTGAGCTTATGCGAAAGCATAAGCTCTACGCGAACCTGAAGAAGTGTATCTTCGGGGCGAGCGAGATACCCGTCCTCGGGTGTCTCGTAGGGAAGAATGGTGTTCGCCCTGACCCGGAAAAGGTCAGAGTGATCAATGAATGGCCAACGCCTTCAAGTGTCAAGGAACTGAGGCAGTTCCTTGGCTTGGCCACGTACTTGTGCAAGTACGTGGAGGATTATGCGGGCAAGATCCGCCCGCTGTCACAGCTTCTTAAGAAAGAAGCTGTGTGGAATTGGACACCCGATTGCCAAAAGGCATTCGATGCAGTCAAGCGGGGCTTGACTGAGGCGCCGATCTTGGCAGTGGCTGACCAAGATCGCCCATTTCACGTAGTGTGTGACGCATCCGATTTCGCGATCGGATGCGCGTTGATGCAGCACGATCACGAGGGCCGTGATCGTGTCGTCTACTACCAATCGCGTCAGCTGAAGCCAGCTGAGCGCAACTATCCGGTGCATGACAAGGAACTCCTTGCCATGAAGTATGCACTCGCAAAGTTCCGAGTGTACTTGCTTGGGAGTAGACCATTTGTGGTCTACACCGACCATGCTTCACTGCGCACCGCAGTGAAGTCGCCACACATTTCACAAAGAATGGCGAGATGGCTCTCATTCTTTGCGGAGTATAACTTCCGGGTCGAATACAAACCCGGAAGATTGAACGTGGTGGCCGACGCGTTATCACGTCGGCCGGACTATGCAGAAGCTGTTGACGTCAATGCCATTGACGCCATGCGATCGAGCAAACCCACATCATCTCTGTTGGATGATGTGAAGGCCGCGTACGCGCACGACGCGGACGCGAAGCTCTTGCTGGCCTATGGCACAGCGCCTTCTGACAAGTCCCGTCAGAAGCTGCCCAAGCACCTTCGAGCGCGTGCACACCGCTTTCGTGTGCACGACGGACTACTGCTTTACAATGCAGTCGACGACAACGCGGATCGCGTTGTCGTGCCAAATGACCATGACCTGCGACTCAGGATCATGTACGAGTATCATGATGCCCCGACTGCGGGACATCTCGGACGTGAGAAGACTTACGTCCTTCTCACGCGCGACTTCTACTGGCACCACCAGTATAAGTGGGTGCGCAAGTACATCCGTGCTTGCGAGGTATGCCAACGCGTAAAGCCTGCGCCATTCGCGCAGGCTCCACTGCAATCACTACCGACTCCGTCGGAGTGTTGGAAGTCCATGTCTTTGGACTTCATCTTTGGTCTTCCCCCGGACAGCGGAGGGAATACCGGTGTTGTGGTCTTCGTCGACCGCTTCAGCAAGATGGTACATCTTGCTGCGGTGCCGGCAGAAGTGACCGCGAAGCAGACGGCCCGTCTGTTCGTCGACATGGTGTTCAAACACCATGGCATGCCGACCGACATCGTGTCGGACAGAGACCCGCGCTTCACAGCGCACCTGTGGCAAGAAGTGTTTACACTTCTTGGGAGCCAGCTTTCCATGTCGACTGCGGATCATCCGCAGACGGACGGTCAAACCGAGCGCGTGAATCGCGTGCTCGTCGATATGTTGAAGAGCTACGCTCACTCGTTCCAATACTGGAGCGAGTGCTTATCGATGGCAGAGTTTGCCATCAATAACTCAGTGCATGCCTCGACCGGGCATACACCGTTCTACGTGAATGCCATGCGGCATCCACGTCTACCGAGTTTACTCGGAGTGATGGCTCCCACTTTAAGTGGGGGAGGATCTACGACTGCAATACAGCAGCCGCAGAAAACCGCTGACACTTGCACAGTGTCAGCTGCAACAATGGACAAACCACATGAGTCTGCGCAGGGCGCAGACTCCCCCAACAACAAGGCCAACGACCACGGGTCTGCGCAGGGCGCAGACACCGCAAAGAACCACGCAGAGGCCGGGCCTCTAGCGGAGAGCGAGCTGAATGACTTCAGCTCGGATGCAATCAGTTTCATCACCAAAAGACAAGCCGTGATTCGGTTTGTCCAAGACACAATAGCAGCTTCTGTTGATCAACAGAAGCTGAACGCAGACAATGCGGGCAGAGGCAACACAAATGAATTTAAAGTTGGTTCATTAGTTTTGTTAGCTACACAAAACCTGCCTAGACATGCAGTTTCGGATTTCGGAGCAAGCAAGCTTGCTCCGCGCTTCATCGGGCCGTTCACTGTGTTGGCACGGCACGGCAACGCATACACGCTAGACATACCGTCTAGCATGCGCCTCCATCCGACCTTTTACGTCGGACGGCTGAAGCCATACCTGCAGCACGAGCCATCTAGCTCGGCTGACCCGAAGCCTCGGCAGGAGCCGAGGCAGAAGCGGAGGACTTGGCCTCGGCGACGAGCAACCTCTCCTCCAGCGCGCGGACGCGCTGGAGCAACCCCTTCATCTGGGTCCCCAGCTCGACCTGGATATTCGAGGCGGTCTGCGAGACCGCCGCGACTTGGGCCTTCTGGTTCGCCAGCTCCTGTTTCAGGGCGGCGAACTCAGCGCCCTGCAGACGCTCCACGGCGGTCACCCGGTCGTGGAGAGGCGCATACTGATCAGCCCGGGGCTGATCATACCCGGGGCGTGTTCCCACCCCCGCCACCGCCGATCCGTGACGCCCGCGGCTCAACCCGCTGGATTGTTGAGCGGATTGTTGACCATAGTATCCCGAAAACGAACCCTCAAGGGGCTCGTTTTCGTATTCGTTGGAGAGGATTTCCTCCCCATCGAGATACATGGGAGCCGCGGAACGTCTTGCTGGAGGACGTTCCGGAAATGGTGAGGGCGTACGAGGAGCAGTACGCGCTGGCGCAGCGGAAGTAACACGAGCGCTGCGATCATCGCTAGCGCCCGAACCCTCACGTGCTAAGAACTTAGCACGGAGCTCTTTGAGACTCTCGGGCACACGGAACGACGTGTACCCGTTCAGGTCGCGGTCGCTCAAGCGGACCGCGCCTGGGAAGCACTTCGTGCACTGAAAGCCCTCGGGCACAGCGCACGGCACATTTGCCTCCTCAGCAGCAACATGAAGTTGCTCCAGCTTTCCACGCTTCGAGTACGTCTCGAAGCGATCACGCGCTTGCTTAATCCGATCACGGTAAGCACTCGGCCTCTTGTTGAAGTTCTCAACAAAGGCGTTCCAGCTTTGACAAAGTGCCTGCCATTCGGGCACTTTGCTGCGAGAAGAGGTCTTCTTGCTTTGAAACCATCGGAGCTCATGAAAGAGTCCGATGTAGTAATCGCGCCTTTGATGCGTTTCCGCATCAAAGTGCAGCTCGGCAGCCACAGCGTCATCTTTGATGGCGCT OLD KEY: GTAGTAATCGCGCCTTTGATGCGTTTCCGCATCAA NEW KEY: AGCTCGGCAGCCACAGCGTCATCTTTGATGGCGCT ........ _A_ X0000000X000X0X00000X000000X000000000X0X000X0X10000X0000X00000X000X00090000 __119__ ........ _T_ 000X00000000000000X00X0XXX00X00000X000X000X00000001000X00XX0000009000000XX0 __119__ ........ _G_ 0X000XX00X00000X0X00000000X00XX0X00X00000X000090XX0000000000XX0XX0000X0X000 __119__ ........ _C_ 00X0X00X00XX0X00X00X00X00000000X0X00X000X000X00X0090XX0X000X0000000XX00000X __119__ ........ _N_ 000000000000000000000000000000000000000000000000000000000000000000000000000 __119__ ........ ALL wwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwvvvuuutttssrrrqqpppoomkkjg __119__ ******** *** ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^**************************************** __119__ ######## CNS AGCTCGGCAGCCACAGCGTCATCTTTGATGGCGCTGCATACGTACAgCGGcACCTCATTCGGAGGtACCGaGTTC __119__ ######## QLT XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX+XXX+XXXXXXXXXXXXXX+XXXX+XXXX __119__ >CONSENSUS__119__ Length: 4764 [gain: 40] ATGGCGTCGAGGTGACGAAGGCGTGTCAACTCCGGGAGTTGACGCTGCAAACAGTGCGGACGGTTGCAAACGTACCGCACTGACGCAATTTGCATGCTGTCGTGCAGCCGGGCTGCACGACGAAGCGCCATGCGATCAAGCCGGGCTTGATATCGCGCGCCCGCAGACAGGGTCTGCCGGCGAAGGGACACATTACCGTGCAGCCGGGCTGCACGAAGGAAAATGCGGTCAAGCCGGGCTTGATACCGCGCGCCCGCGGACAGGGTCCGCCGGCGAACGACTGTCCACGGCCGGGCCTGGACCAGAAGAACAACTGTGCGGAGCCGGGCTCCGCACAACAAGAAGACGGCGCAAGCGGAAAACGCTGCGCAAGTCTCGGTCCGGGACCGAGACGCAACAAGAGCAGTCTGCTGGGCAGACTGCGGCGGTGACGCCGAATGTCAAGACGCTAAGCGTCTTGACGCGCACCGATACTGGATTCCAGTATCGTGACATGGAACTCGCTAGTCCTCCGACGACGGCGTCGGAGTTGACTTCGCTTCCAGCCATGAGCTGGAAGCGCTTCACGCGCGACTTGCACGATGGACGCATCGAGCAAGTCTGCGTTCTTTCGGACAGCGAAAGAACGGAGAGCGAGAGCGAAGAGCTGAGGCAGCTCTTCATGGGAAGTACCACTGAGAGTGAAGACACTCTCAGTGCGAAGACGAAGCGAGAGCGCTTCGAGGAACAAGGTTGGGACTCGCTGAAGTCGAGTCCCTATTACGAATTGTTGAGGGAGTACAAAGACGTACTCCCGGAAGAGATTCCTGCGGAGCTTCCGCAGGATAAGGGCATTCAGCACGAGATTGATCTCGTGCCGGGCACGAAGTACTGTGTCACGCGGCAGTGGCCACTGCCGCGAGAGCAAGTGAAAGCGATCGACGACTTCTTTGAAAGTCGTCGTAAAGCAGGACAAGTGCGGGAATCAAAGTCCCCGCACAGTGCTCCGACGTTCTGTGTCAAGAAGCCACAGGGCGGATGGCGCATCGTTCATGCCTACAACAAGCTGAACGATGCGACGGTACCGGCGCAGACGCCGATACCGCGAAAAGATGTTATCATCGATTCGATGGCCGGGAGCACCGTTTACAGTGCTCTCGACTTGCGAGATGGATTTTATCAAATCCTAATGCGTGAGAGCGATATCCCTCTCACGGCAGTGAGCACGCCAAGCGGCATGCTCTGGGAATGGCTAGTAATGCCACAGGGGCTTAAGAACGCCCCTGCGACTTTCAACAGGTGCGTGACGCACTTGTTGCGCTCGGTGCGCGACTTCGCACCGAGCTACTTCGATGATGTATTCATCCACAGCCGGGCTGTGGACGGGAAGACCGACGTAGAGATGCACAGGGTGCATCTCCGGAAGCTACTTGAGCTTATGCGAAAGCATAAGCTCTACGCGAACCTGAAGAAGTGTATCTTCGGGGCGAGCGAGATACCCGTCCTCGGGTGTCTCGTAGGGAAGAATGGTGTTCGCCCTGACCCGGAAAAGGTCAGAGTGATCAATGAATGGCCAACGCCTTCAAGTGTCAAGGAACTGAGGCAGTTCCTTGGCTTGGCCACGTACTTGTGCAAGTACGTGGAGGATTATGCGGGCAAGATCCGCCCGCTGTCACAGCTTCTTAAGAAAGAAGCTGTGTGGAATTGGACACCCGATTGCCAAAAGGCATTCGATGCAGTCAAGCGGGGCTTGACTGAGGCGCCGATCTTGGCAGTGGCTGACCAAGATCGCCCATTTCACGTAGTGTGTGACGCATCCGATTTCGCGATCGGATGCGCGTTGATGCAGCACGATCACGAGGGCCGTGATCGTGTCGTCTACTACCAATCGCGTCAGCTGAAGCCAGCTGAGCGCAACTATCCGGTGCATGACAAGGAACTCCTTGCCATGAAGTATGCACTCGCAAAGTTCCGAGTGTACTTGCTTGGGAGTAGACCATTTGTGGTCTACACCGACCATGCTTCACTGCGCACCGCAGTGAAGTCGCCACACATTTCACAAAGAATGGCGAGATGGCTCTCATTCTTTGCGGAGTATAACTTCCGGGTCGAATACAAACCCGGAAGATTGAACGTGGTGGCCGACGCGTTATCACGTCGGCCGGACTATGCAGAAGCTGTTGACGTCAATGCCATTGACGCCATGCGATCGAGCAAACCCACATCATCTCTGTTGGATGATGTGAAGGCCGCGTACGCGCACGACGCGGACGCGAAGCTCTTGCTGGCCTATGGCACAGCGCCTTCTGACAAGTCCCGTCAGAAGCTGCCCAAGCACCTTCGAGCGCGTGCACACCGCTTTCGTGTGCACGACGGACTACTGCTTTACAATGCAGTCGACGACAACGCGGATCGCGTTGTCGTGCCAAATGACCATGACCTGCGACTCAGGATCATGTACGAGTATCATGATGCCCCGACTGCGGGACATCTCGGACGTGAGAAGACTTACGTCCTTCTCACGCGCGACTTCTACTGGCACCACCAGTATAAGTGGGTGCGCAAGTACATCCGTGCTTGCGAGGTATGCCAACGCGTAAAGCCTGCGCCATTCGCGCAGGCTCCACTGCAATCACTACCGACTCCGTCGGAGTGTTGGAAGTCCATGTCTTTGGACTTCATCTTTGGTCTTCCCCCGGACAGCGGAGGGAATACCGGTGTTGTGGTCTTCGTCGACCGCTTCAGCAAGATGGTACATCTTGCTGCGGTGCCGGCAGAAGTGACCGCGAAGCAGACGGCCCGTCTGTTCGTCGACATGGTGTTCAAACACCATGGCATGCCGACCGACATCGTGTCGGACAGAGACCCGCGCTTCACAGCGCACCTGTGGCAAGAAGTGTTTACACTTCTTGGGAGCCAGCTTTCCATGTCGACTGCGGATCATCCGCAGACGGACGGTCAAACCGAGCGCGTGAATCGCGTGCTCGTCGATATGTTGAAGAGCTACGCTCACTCGTTCCAATACTGGAGCGAGTGCTTATCGATGGCAGAGTTTGCCATCAATAACTCAGTGCATGCCTCGACCGGGCATACACCGTTCTACGTGAATGCCATGCGGCATCCACGTCTACCGAGTTTACTCGGAGTGATGGCTCCCACTTTAAGTGGGGGAGGATCTACGACTGCAATACAGCAGCCGCAGAAAACCGCTGACACTTGCACAGTGTCAGCTGCAACAATGGACAAACCACATGAGTCTGCGCAGGGCGCAGACTCCCCCAACAACAAGGCCAACGACCACGGGTCTGCGCAGGGCGCAGACACCGCAAAGAACCACGCAGAGGCCGGGCCTCTAGCGGAGAGCGAGCTGAATGACTTCAGCTCGGATGCAATCAGTTTCATCACCAAAAGACAAGCCGTGATTCGGTTTGTCCAAGACACAATAGCAGCTTCTGTTGATCAACAGAAGCTGAACGCAGACAATGCGGGCAGAGGCAACACAAATGAATTTAAAGTTGGTTCATTAGTTTTGTTAGCTACACAAAACCTGCCTAGACATGCAGTTTCGGATTTCGGAGCAAGCAAGCTTGCTCCGCGCTTCATCGGGCCGTTCACTGTGTTGGCACGGCACGGCAACGCATACACGCTAGACATACCGTCTAGCATGCGCCTCCATCCGACCTTTTACGTCGGACGGCTGAAGCCATACCTGCAGCACGAGCCATCTAGCTCGGCTGACCCGAAGCCTCGGCAGGAGCCGAGGCAGAAGCGGAGGACTTGGCCTCGGCGACGAGCAACCTCTCCTCCAGCGCGCGGACGCGCTGGAGCAACCCCTTCATCTGGGTCCCCAGCTCGACCTGGATATTCGAGGCGGTCTGCGAGACCGCCGCGACTTGGGCCTTCTGGTTCGCCAGCTCCTGTTTCAGGGCGGCGAACTCAGCGCCCTGCAGACGCTCCACGGCGGTCACCCGGTCGTGGAGAGGCGCATACTGATCAGCCCGGGGCTGATCATACCCGGGGCGTGTTCCCACCCCCGCCACCGCCGATCCGTGACGCCCGCGGCTCAACCCGCTGGATTGTTGAGCGGATTGTTGACCATAGTATCCCGAAAACGAACCCTCAAGGGGCTCGTTTTCGTATTCGTTGGAGAGGATTTCCTCCCCATCGAGATACATGGGAGCCGCGGAACGTCTTGCTGGAGGACGTTCCGGAAATGGTGAGGGCGTACGAGGAGCAGTACGCGCTGGCGCAGCGGAAGTAACACGAGCGCTGCGATCATCGCTAGCGCCCGAACCCTCACGTGCTAAGAACTTAGCACGGAGCTCTTTGAGACTCTCGGGCACACGGAACGACGTGTACCCGTTCAGGTCGCGGTCGCTCAAGCGGACCGCGCCTGGGAAGCACTTCGTGCACTGAAAGCCCTCGGGCACAGCGCACGGCACATTTGCCTCCTCAGCAGCAACATGAAGTTGCTCCAGCTTTCCACGCTTCGAGTACGTCTCGAAGCGATCACGCGCTTGCTTAATCCGATCACGGTAAGCACTCGGCCTCTTGTTGAAGTTCTCAACAAAGGCGTTCCAGCTTTGACAAAGTGCCTGCCATTCGGGCACTTTGCTGCGAGAAGAGGTCTTCTTGCTTTGAAACCATCGGAGCTCATGAAAGAGTCCGATGTAGTAATCGCGCCTTTGATGCGTTTCCGCATCAAAGTGCAGCTCGGCAGCCACAGCGTCATCTTTGATGGCGCTGCATACGTACAGCGGCACCTCATTCGGAGGTACCGAGTTC OLD KEY: AGCTCGGCAGCCACAGCGTCATCTTTGATGGCGCT NEW KEY: CGTACAGCGGCACCTCATTCGGAGGTACCGAGTTC ........ _A_ 000X0X00000X0000X00000X000X000X000000X5X0000000011X000000X00000X00009000900 __120__ ........ _T_ 00X00000000000X00XX000000X000000XX0000501000X000100X0X000010000000000X00070 __120__ ........ _G_ 0X0000X0XX0000000000XX0XX0000X0X0000000000XX000X0900000XX00X0XX00XX00000009 __120__ ........ _C_ X000X00X00X0XX0X000X0000000XX00000XXX0009X000XX08000X0X00090X000X00X00XX021 __120__ ........ _N_ 000000000000000000000000000000000000000000000000000000000000000000000000000 __120__ ........ ALL wwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwvvutttsssrrrqqppppoomje __120__ ******** *** ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^**************************************** __120__ ######## CNS CGTACAGCGGCACCTCATTCGGAGGTACCGAGTTCCCAtAcCGGTCCGcgATCTCGGAcGCGGACGGCaTCCatg __120__ ######## QLT XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX?X+XXXXXXX++XXXXXXXX+XXXXXXXXX+XXX+@+ __120__ >CONSENSUS__120__ Length: 4804 [gain: 40] ATGGCGTCGAGGTGACGAAGGCGTGTCAACTCCGGGAGTTGACGCTGCAAACAGTGCGGACGGTTGCAAACGTACCGCACTGACGCAATTTGCATGCTGTCGTGCAGCCGGGCTGCACGACGAAGCGCCATGCGATCAAGCCGGGCTTGATATCGCGCGCCCGCAGACAGGGTCTGCCGGCGAAGGGACACATTACCGTGCAGCCGGGCTGCACGAAGGAAAATGCGGTCAAGCCGGGCTTGATACCGCGCGCCCGCGGACAGGGTCCGCCGGCGAACGACTGTCCACGGCCGGGCCTGGACCAGAAGAACAACTGTGCGGAGCCGGGCTCCGCACAACAAGAAGACGGCGCAAGCGGAAAACGCTGCGCAAGTCTCGGTCCGGGACCGAGACGCAACAAGAGCAGTCTGCTGGGCAGACTGCGGCGGTGACGCCGAATGTCAAGACGCTAAGCGTCTTGACGCGCACCGATACTGGATTCCAGTATCGTGACATGGAACTCGCTAGTCCTCCGACGACGGCGTCGGAGTTGACTTCGCTTCCAGCCATGAGCTGGAAGCGCTTCACGCGCGACTTGCACGATGGACGCATCGAGCAAGTCTGCGTTCTTTCGGACAGCGAAAGAACGGAGAGCGAGAGCGAAGAGCTGAGGCAGCTCTTCATGGGAAGTACCACTGAGAGTGAAGACACTCTCAGTGCGAAGACGAAGCGAGAGCGCTTCGAGGAACAAGGTTGGGACTCGCTGAAGTCGAGTCCCTATTACGAATTGTTGAGGGAGTACAAAGACGTACTCCCGGAAGAGATTCCTGCGGAGCTTCCGCAGGATAAGGGCATTCAGCACGAGATTGATCTCGTGCCGGGCACGAAGTACTGTGTCACGCGGCAGTGGCCACTGCCGCGAGAGCAAGTGAAAGCGATCGACGACTTCTTTGAAAGTCGTCGTAAAGCAGGACAAGTGCGGGAATCAAAGTCCCCGCACAGTGCTCCGACGTTCTGTGTCAAGAAGCCACAGGGCGGATGGCGCATCGTTCATGCCTACAACAAGCTGAACGATGCGACGGTACCGGCGCAGACGCCGATACCGCGAAAAGATGTTATCATCGATTCGATGGCCGGGAGCACCGTTTACAGTGCTCTCGACTTGCGAGATGGATTTTATCAAATCCTAATGCGTGAGAGCGATATCCCTCTCACGGCAGTGAGCACGCCAAGCGGCATGCTCTGGGAATGGCTAGTAATGCCACAGGGGCTTAAGAACGCCCCTGCGACTTTCAACAGGTGCGTGACGCACTTGTTGCGCTCGGTGCGCGACTTCGCACCGAGCTACTTCGATGATGTATTCATCCACAGCCGGGCTGTGGACGGGAAGACCGACGTAGAGATGCACAGGGTGCATCTCCGGAAGCTACTTGAGCTTATGCGAAAGCATAAGCTCTACGCGAACCTGAAGAAGTGTATCTTCGGGGCGAGCGAGATACCCGTCCTCGGGTGTCTCGTAGGGAAGAATGGTGTTCGCCCTGACCCGGAAAAGGTCAGAGTGATCAATGAATGGCCAACGCCTTCAAGTGTCAAGGAACTGAGGCAGTTCCTTGGCTTGGCCACGTACTTGTGCAAGTACGTGGAGGATTATGCGGGCAAGATCCGCCCGCTGTCACAGCTTCTTAAGAAAGAAGCTGTGTGGAATTGGACACCCGATTGCCAAAAGGCATTCGATGCAGTCAAGCGGGGCTTGACTGAGGCGCCGATCTTGGCAGTGGCTGACCAAGATCGCCCATTTCACGTAGTGTGTGACGCATCCGATTTCGCGATCGGATGCGCGTTGATGCAGCACGATCACGAGGGCCGTGATCGTGTCGTCTACTACCAATCGCGTCAGCTGAAGCCAGCTGAGCGCAACTATCCGGTGCATGACAAGGAACTCCTTGCCATGAAGTATGCACTCGCAAAGTTCCGAGTGTACTTGCTTGGGAGTAGACCATTTGTGGTCTACACCGACCATGCTTCACTGCGCACCGCAGTGAAGTCGCCACACATTTCACAAAGAATGGCGAGATGGCTCTCATTCTTTGCGGAGTATAACTTCCGGGTCGAATACAAACCCGGAAGATTGAACGTGGTGGCCGACGCGTTATCACGTCGGCCGGACTATGCAGAAGCTGTTGACGTCAATGCCATTGACGCCATGCGATCGAGCAAACCCACATCATCTCTGTTGGATGATGTGAAGGCCGCGTACGCGCACGACGCGGACGCGAAGCTCTTGCTGGCCTATGGCACAGCGCCTTCTGACAAGTCCCGTCAGAAGCTGCCCAAGCACCTTCGAGCGCGTGCACACCGCTTTCGTGTGCACGACGGACTACTGCTTTACAATGCAGTCGACGACAACGCGGATCGCGTTGTCGTGCCAAATGACCATGACCTGCGACTCAGGATCATGTACGAGTATCATGATGCCCCGACTGCGGGACATCTCGGACGTGAGAAGACTTACGTCCTTCTCACGCGCGACTTCTACTGGCACCACCAGTATAAGTGGGTGCGCAAGTACATCCGTGCTTGCGAGGTATGCCAACGCGTAAAGCCTGCGCCATTCGCGCAGGCTCCACTGCAATCACTACCGACTCCGTCGGAGTGTTGGAAGTCCATGTCTTTGGACTTCATCTTTGGTCTTCCCCCGGACAGCGGAGGGAATACCGGTGTTGTGGTCTTCGTCGACCGCTTCAGCAAGATGGTACATCTTGCTGCGGTGCCGGCAGAAGTGACCGCGAAGCAGACGGCCCGTCTGTTCGTCGACATGGTGTTCAAACACCATGGCATGCCGACCGACATCGTGTCGGACAGAGACCCGCGCTTCACAGCGCACCTGTGGCAAGAAGTGTTTACACTTCTTGGGAGCCAGCTTTCCATGTCGACTGCGGATCATCCGCAGACGGACGGTCAAACCGAGCGCGTGAATCGCGTGCTCGTCGATATGTTGAAGAGCTACGCTCACTCGTTCCAATACTGGAGCGAGTGCTTATCGATGGCAGAGTTTGCCATCAATAACTCAGTGCATGCCTCGACCGGGCATACACCGTTCTACGTGAATGCCATGCGGCATCCACGTCTACCGAGTTTACTCGGAGTGATGGCTCCCACTTTAAGTGGGGGAGGATCTACGACTGCAATACAGCAGCCGCAGAAAACCGCTGACACTTGCACAGTGTCAGCTGCAACAATGGACAAACCACATGAGTCTGCGCAGGGCGCAGACTCCCCCAACAACAAGGCCAACGACCACGGGTCTGCGCAGGGCGCAGACACCGCAAAGAACCACGCAGAGGCCGGGCCTCTAGCGGAGAGCGAGCTGAATGACTTCAGCTCGGATGCAATCAGTTTCATCACCAAAAGACAAGCCGTGATTCGGTTTGTCCAAGACACAATAGCAGCTTCTGTTGATCAACAGAAGCTGAACGCAGACAATGCGGGCAGAGGCAACACAAATGAATTTAAAGTTGGTTCATTAGTTTTGTTAGCTACACAAAACCTGCCTAGACATGCAGTTTCGGATTTCGGAGCAAGCAAGCTTGCTCCGCGCTTCATCGGGCCGTTCACTGTGTTGGCACGGCACGGCAACGCATACACGCTAGACATACCGTCTAGCATGCGCCTCCATCCGACCTTTTACGTCGGACGGCTGAAGCCATACCTGCAGCACGAGCCATCTAGCTCGGCTGACCCGAAGCCTCGGCAGGAGCCGAGGCAGAAGCGGAGGACTTGGCCTCGGCGACGAGCAACCTCTCCTCCAGCGCGCGGACGCGCTGGAGCAACCCCTTCATCTGGGTCCCCAGCTCGACCTGGATATTCGAGGCGGTCTGCGAGACCGCCGCGACTTGGGCCTTCTGGTTCGCCAGCTCCTGTTTCAGGGCGGCGAACTCAGCGCCCTGCAGACGCTCCACGGCGGTCACCCGGTCGTGGAGAGGCGCATACTGATCAGCCCGGGGCTGATCATACCCGGGGCGTGTTCCCACCCCCGCCACCGCCGATCCGTGACGCCCGCGGCTCAACCCGCTGGATTGTTGAGCGGATTGTTGACCATAGTATCCCGAAAACGAACCCTCAAGGGGCTCGTTTTCGTATTCGTTGGAGAGGATTTCCTCCCCATCGAGATACATGGGAGCCGCGGAACGTCTTGCTGGAGGACGTTCCGGAAATGGTGAGGGCGTACGAGGAGCAGTACGCGCTGGCGCAGCGGAAGTAACACGAGCGCTGCGATCATCGCTAGCGCCCGAACCCTCACGTGCTAAGAACTTAGCACGGAGCTCTTTGAGACTCTCGGGCACACGGAACGACGTGTACCCGTTCAGGTCGCGGTCGCTCAAGCGGACCGCGCCTGGGAAGCACTTCGTGCACTGAAAGCCCTCGGGCACAGCGCACGGCACATTTGCCTCCTCAGCAGCAACATGAAGTTGCTCCAGCTTTCCACGCTTCGAGTACGTCTCGAAGCGATCACGCGCTTGCTTAATCCGATCACGGTAAGCACTCGGCCTCTTGTTGAAGTTCTCAACAAAGGCGTTCCAGCTTTGACAAAGTGCCTGCCATTCGGGCACTTTGCTGCGAGAAGAGGTCTTCTTGCTTTGAAACCATCGGAGCTCATGAAAGAGTCCGATGTAGTAATCGCGCCTTTGATGCGTTTCCGCATCAAAGTGCAGCTCGGCAGCCACAGCGTCATCTTTGATGGCGCTGCATACGTACAGCGGCACCTCATTCGGAGGTACCGAGTTCCCATACCGGTCCGCGATCTCGGACGCGGACGGCATCCATG OLD KEY: CGTACAGCGGCACCTCATTCGGAGGTACCGAGTTC NEW KEY: CCGGTCCGCGATCTCGGACGCGGACGGCATCCATG ........ _A_ 0000000000X000000X00000X0000X000X000X00000000000400000400000000303110010300 __121__ ........ _T_ 0000X000000X0X000000000000000X000X000X0000000400000100000000000000001361100 __121__ ........ _G_ 00XX000X0X00000XX00X0XX00XX0000000XX000806061171168382172727289695841218595 __121__ ........ _C_ XX000XX0X000X0X000X0X000X00X00XX000000X2X4949529432618428282821101068521106 __121__ ........ _N_ 000000000000000000000000000000000000000000000000000000000000000000000000000 __121__ ........ ALL vvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvuuutttttsssssrrrqqqqpppppoooooonmlkjgcb __121__ ******** *** ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^**************************************** __121__ ######## CNS CCGGTCCGCGATCTCGGACGCGGACGGCATCCATGGATCgCgcgccgcnggcgcngcgcgcggggggccctgggc __121__ ######## QLT XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX+X!+!+?@+-!+!++-@+@+@+++!+?+!+?!+?+! __121__ >CONSENSUS__121__ Length: 4817 [gain: 13] ATGGCGTCGAGGTGACGAAGGCGTGTCAACTCCGGGAGTTGACGCTGCAAACAGTGCGGACGGTTGCAAACGTACCGCACTGACGCAATTTGCATGCTGTCGTGCAGCCGGGCTGCACGACGAAGCGCCATGCGATCAAGCCGGGCTTGATATCGCGCGCCCGCAGACAGGGTCTGCCGGCGAAGGGACACATTACCGTGCAGCCGGGCTGCACGAAGGAAAATGCGGTCAAGCCGGGCTTGATACCGCGCGCCCGCGGACAGGGTCCGCCGGCGAACGACTGTCCACGGCCGGGCCTGGACCAGAAGAACAACTGTGCGGAGCCGGGCTCCGCACAACAAGAAGACGGCGCAAGCGGAAAACGCTGCGCAAGTCTCGGTCCGGGACCGAGACGCAACAAGAGCAGTCTGCTGGGCAGACTGCGGCGGTGACGCCGAATGTCAAGACGCTAAGCGTCTTGACGCGCACCGATACTGGATTCCAGTATCGTGACATGGAACTCGCTAGTCCTCCGACGACGGCGTCGGAGTTGACTTCGCTTCCAGCCATGAGCTGGAAGCGCTTCACGCGCGACTTGCACGATGGACGCATCGAGCAAGTCTGCGTTCTTTCGGACAGCGAAAGAACGGAGAGCGAGAGCGAAGAGCTGAGGCAGCTCTTCATGGGAAGTACCACTGAGAGTGAAGACACTCTCAGTGCGAAGACGAAGCGAGAGCGCTTCGAGGAACAAGGTTGGGACTCGCTGAAGTCGAGTCCCTATTACGAATTGTTGAGGGAGTACAAAGACGTACTCCCGGAAGAGATTCCTGCGGAGCTTCCGCAGGATAAGGGCATTCAGCACGAGATTGATCTCGTGCCGGGCACGAAGTACTGTGTCACGCGGCAGTGGCCACTGCCGCGAGAGCAAGTGAAAGCGATCGACGACTTCTTTGAAAGTCGTCGTAAAGCAGGACAAGTGCGGGAATCAAAGTCCCCGCACAGTGCTCCGACGTTCTGTGTCAAGAAGCCACAGGGCGGATGGCGCATCGTTCATGCCTACAACAAGCTGAACGATGCGACGGTACCGGCGCAGACGCCGATACCGCGAAAAGATGTTATCATCGATTCGATGGCCGGGAGCACCGTTTACAGTGCTCTCGACTTGCGAGATGGATTTTATCAAATCCTAATGCGTGAGAGCGATATCCCTCTCACGGCAGTGAGCACGCCAAGCGGCATGCTCTGGGAATGGCTAGTAATGCCACAGGGGCTTAAGAACGCCCCTGCGACTTTCAACAGGTGCGTGACGCACTTGTTGCGCTCGGTGCGCGACTTCGCACCGAGCTACTTCGATGATGTATTCATCCACAGCCGGGCTGTGGACGGGAAGACCGACGTAGAGATGCACAGGGTGCATCTCCGGAAGCTACTTGAGCTTATGCGAAAGCATAAGCTCTACGCGAACCTGAAGAAGTGTATCTTCGGGGCGAGCGAGATACCCGTCCTCGGGTGTCTCGTAGGGAAGAATGGTGTTCGCCCTGACCCGGAAAAGGTCAGAGTGATCAATGAATGGCCAACGCCTTCAAGTGTCAAGGAACTGAGGCAGTTCCTTGGCTTGGCCACGTACTTGTGCAAGTACGTGGAGGATTATGCGGGCAAGATCCGCCCGCTGTCACAGCTTCTTAAGAAAGAAGCTGTGTGGAATTGGACACCCGATTGCCAAAAGGCATTCGATGCAGTCAAGCGGGGCTTGACTGAGGCGCCGATCTTGGCAGTGGCTGACCAAGATCGCCCATTTCACGTAGTGTGTGACGCATCCGATTTCGCGATCGGATGCGCGTTGATGCAGCACGATCACGAGGGCCGTGATCGTGTCGTCTACTACCAATCGCGTCAGCTGAAGCCAGCTGAGCGCAACTATCCGGTGCATGACAAGGAACTCCTTGCCATGAAGTATGCACTCGCAAAGTTCCGAGTGTACTTGCTTGGGAGTAGACCATTTGTGGTCTACACCGACCATGCTTCACTGCGCACCGCAGTGAAGTCGCCACACATTTCACAAAGAATGGCGAGATGGCTCTCATTCTTTGCGGAGTATAACTTCCGGGTCGAATACAAACCCGGAAGATTGAACGTGGTGGCCGACGCGTTATCACGTCGGCCGGACTATGCAGAAGCTGTTGACGTCAATGCCATTGACGCCATGCGATCGAGCAAACCCACATCATCTCTGTTGGATGATGTGAAGGCCGCGTACGCGCACGACGCGGACGCGAAGCTCTTGCTGGCCTATGGCACAGCGCCTTCTGACAAGTCCCGTCAGAAGCTGCCCAAGCACCTTCGAGCGCGTGCACACCGCTTTCGTGTGCACGACGGACTACTGCTTTACAATGCAGTCGACGACAACGCGGATCGCGTTGTCGTGCCAAATGACCATGACCTGCGACTCAGGATCATGTACGAGTATCATGATGCCCCGACTGCGGGACATCTCGGACGTGAGAAGACTTACGTCCTTCTCACGCGCGACTTCTACTGGCACCACCAGTATAAGTGGGTGCGCAAGTACATCCGTGCTTGCGAGGTATGCCAACGCGTAAAGCCTGCGCCATTCGCGCAGGCTCCACTGCAATCACTACCGACTCCGTCGGAGTGTTGGAAGTCCATGTCTTTGGACTTCATCTTTGGTCTTCCCCCGGACAGCGGAGGGAATACCGGTGTTGTGGTCTTCGTCGACCGCTTCAGCAAGATGGTACATCTTGCTGCGGTGCCGGCAGAAGTGACCGCGAAGCAGACGGCCCGTCTGTTCGTCGACATGGTGTTCAAACACCATGGCATGCCGACCGACATCGTGTCGGACAGAGACCCGCGCTTCACAGCGCACCTGTGGCAAGAAGTGTTTACACTTCTTGGGAGCCAGCTTTCCATGTCGACTGCGGATCATCCGCAGACGGACGGTCAAACCGAGCGCGTGAATCGCGTGCTCGTCGATATGTTGAAGAGCTACGCTCACTCGTTCCAATACTGGAGCGAGTGCTTATCGATGGCAGAGTTTGCCATCAATAACTCAGTGCATGCCTCGACCGGGCATACACCGTTCTACGTGAATGCCATGCGGCATCCACGTCTACCGAGTTTACTCGGAGTGATGGCTCCCACTTTAAGTGGGGGAGGATCTACGACTGCAATACAGCAGCCGCAGAAAACCGCTGACACTTGCACAGTGTCAGCTGCAACAATGGACAAACCACATGAGTCTGCGCAGGGCGCAGACTCCCCCAACAACAAGGCCAACGACCACGGGTCTGCGCAGGGCGCAGACACCGCAAAGAACCACGCAGAGGCCGGGCCTCTAGCGGAGAGCGAGCTGAATGACTTCAGCTCGGATGCAATCAGTTTCATCACCAAAAGACAAGCCGTGATTCGGTTTGTCCAAGACACAATAGCAGCTTCTGTTGATCAACAGAAGCTGAACGCAGACAATGCGGGCAGAGGCAACACAAATGAATTTAAAGTTGGTTCATTAGTTTTGTTAGCTACACAAAACCTGCCTAGACATGCAGTTTCGGATTTCGGAGCAAGCAAGCTTGCTCCGCGCTTCATCGGGCCGTTCACTGTGTTGGCACGGCACGGCAACGCATACACGCTAGACATACCGTCTAGCATGCGCCTCCATCCGACCTTTTACGTCGGACGGCTGAAGCCATACCTGCAGCACGAGCCATCTAGCTCGGCTGACCCGAAGCCTCGGCAGGAGCCGAGGCAGAAGCGGAGGACTTGGCCTCGGCGACGAGCAACCTCTCCTCCAGCGCGCGGACGCGCTGGAGCAACCCCTTCATCTGGGTCCCCAGCTCGACCTGGATATTCGAGGCGGTCTGCGAGACCGCCGCGACTTGGGCCTTCTGGTTCGCCAGCTCCTGTTTCAGGGCGGCGAACTCAGCGCCCTGCAGACGCTCCACGGCGGTCACCCGGTCGTGGAGAGGCGCATACTGATCAGCCCGGGGCTGATCATACCCGGGGCGTGTTCCCACCCCCGCCACCGCCGATCCGTGACGCCCGCGGCTCAACCCGCTGGATTGTTGAGCGGATTGTTGACCATAGTATCCCGAAAACGAACCCTCAAGGGGCTCGTTTTCGTATTCGTTGGAGAGGATTTCCTCCCCATCGAGATACATGGGAGCCGCGGAACGTCTTGCTGGAGGACGTTCCGGAAATGGTGAGGGCGTACGAGGAGCAGTACGCGCTGGCGCAGCGGAAGTAACACGAGCGCTGCGATCATCGCTAGCGCCCGAACCCTCACGTGCTAAGAACTTAGCACGGAGCTCTTTGAGACTCTCGGGCACACGGAACGACGTGTACCCGTTCAGGTCGCGGTCGCTCAAGCGGACCGCGCCTGGGAAGCACTTCGTGCACTGAAAGCCCTCGGGCACAGCGCACGGCACATTTGCCTCCTCAGCAGCAACATGAAGTTGCTCCAGCTTTCCACGCTTCGAGTACGTCTCGAAGCGATCACGCGCTTGCTTAATCCGATCACGGTAAGCACTCGGCCTCTTGTTGAAGTTCTCAACAAAGGCGTTCCAGCTTTGACAAAGTGCCTGCCATTCGGGCACTTTGCTGCGAGAAGAGGTCTTCTTGCTTTGAAACCATCGGAGCTCATGAAAGAGTCCGATGTAGTAATCGCGCCTTTGATGCGTTTCCGCATCAAAGTGCAGCTCGGCAGCCACAGCGTCATCTTTGATGGCGCTGCATACGTACAGCGGCACCTCATTCGGAGGTACCGAGTTCCCATACCGGTCCGCGATCTCGGACGCGGACGGCATCCATGGATCGCGCGCCGC OLD KEY: CCGGTCCGCGATCTCGGACGCGGACGGCATCCATG NEW KEY: TCGGACGCGGACGGCATCCATGGATCGCGCGCCGC ........ _A_ 0000X00000X0000X000X000X00000000000300010410000000202000000210000073X306200 __122__ ........ _T_ X000000000000000X000X000X00000000000001000000000000000001800004996000600000 __122__ ........ _G_ 00XX00X0XX00XX0000000XX000X0X0X00X02782911919191998X79501097952013310101020 __122__ ........ _C_ 0X000X0X000X00X00XX000000X0X0X0XX0X53271951919291100115X82111541010600X388X __122__ ........ _N_ 000000000000000000000000000000000000000000000000000000000000000000000000000 __122__ ........ ALL eeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeedddddddcccccccccbbbbbaaaaaa98888654 __122__ ******** *** ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^**************************************** __122__ ######## CNS TCGGACGCGGACGGCATCCATGGATCGCGCGCCGCcggcgccgcgcgcgggGggcCctgggcntttacAtCaccC __122__ ######## QLT XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX?@+@++?+++++++++X@+?X+++@+?-++!@-X-X-++X __122__ >CONSENSUS__122__ Length: 4844 [gain: 27] ATGGCGTCGAGGTGACGAAGGCGTGTCAACTCCGGGAGTTGACGCTGCAAACAGTGCGGACGGTTGCAAACGTACCGCACTGACGCAATTTGCATGCTGTCGTGCAGCCGGGCTGCACGACGAAGCGCCATGCGATCAAGCCGGGCTTGATATCGCGCGCCCGCAGACAGGGTCTGCCGGCGAAGGGACACATTACCGTGCAGCCGGGCTGCACGAAGGAAAATGCGGTCAAGCCGGGCTTGATACCGCGCGCCCGCGGACAGGGTCCGCCGGCGAACGACTGTCCACGGCCGGGCCTGGACCAGAAGAACAACTGTGCGGAGCCGGGCTCCGCACAACAAGAAGACGGCGCAAGCGGAAAACGCTGCGCAAGTCTCGGTCCGGGACCGAGACGCAACAAGAGCAGTCTGCTGGGCAGACTGCGGCGGTGACGCCGAATGTCAAGACGCTAAGCGTCTTGACGCGCACCGATACTGGATTCCAGTATCGTGACATGGAACTCGCTAGTCCTCCGACGACGGCGTCGGAGTTGACTTCGCTTCCAGCCATGAGCTGGAAGCGCTTCACGCGCGACTTGCACGATGGACGCATCGAGCAAGTCTGCGTTCTTTCGGACAGCGAAAGAACGGAGAGCGAGAGCGAAGAGCTGAGGCAGCTCTTCATGGGAAGTACCACTGAGAGTGAAGACACTCTCAGTGCGAAGACGAAGCGAGAGCGCTTCGAGGAACAAGGTTGGGACTCGCTGAAGTCGAGTCCCTATTACGAATTGTTGAGGGAGTACAAAGACGTACTCCCGGAAGAGATTCCTGCGGAGCTTCCGCAGGATAAGGGCATTCAGCACGAGATTGATCTCGTGCCGGGCACGAAGTACTGTGTCACGCGGCAGTGGCCACTGCCGCGAGAGCAAGTGAAAGCGATCGACGACTTCTTTGAAAGTCGTCGTAAAGCAGGACAAGTGCGGGAATCAAAGTCCCCGCACAGTGCTCCGACGTTCTGTGTCAAGAAGCCACAGGGCGGATGGCGCATCGTTCATGCCTACAACAAGCTGAACGATGCGACGGTACCGGCGCAGACGCCGATACCGCGAAAAGATGTTATCATCGATTCGATGGCCGGGAGCACCGTTTACAGTGCTCTCGACTTGCGAGATGGATTTTATCAAATCCTAATGCGTGAGAGCGATATCCCTCTCACGGCAGTGAGCACGCCAAGCGGCATGCTCTGGGAATGGCTAGTAATGCCACAGGGGCTTAAGAACGCCCCTGCGACTTTCAACAGGTGCGTGACGCACTTGTTGCGCTCGGTGCGCGACTTCGCACCGAGCTACTTCGATGATGTATTCATCCACAGCCGGGCTGTGGACGGGAAGACCGACGTAGAGATGCACAGGGTGCATCTCCGGAAGCTACTTGAGCTTATGCGAAAGCATAAGCTCTACGCGAACCTGAAGAAGTGTATCTTCGGGGCGAGCGAGATACCCGTCCTCGGGTGTCTCGTAGGGAAGAATGGTGTTCGCCCTGACCCGGAAAAGGTCAGAGTGATCAATGAATGGCCAACGCCTTCAAGTGTCAAGGAACTGAGGCAGTTCCTTGGCTTGGCCACGTACTTGTGCAAGTACGTGGAGGATTATGCGGGCAAGATCCGCCCGCTGTCACAGCTTCTTAAGAAAGAAGCTGTGTGGAATTGGACACCCGATTGCCAAAAGGCATTCGATGCAGTCAAGCGGGGCTTGACTGAGGCGCCGATCTTGGCAGTGGCTGACCAAGATCGCCCATTTCACGTAGTGTGTGACGCATCCGATTTCGCGATCGGATGCGCGTTGATGCAGCACGATCACGAGGGCCGTGATCGTGTCGTCTACTACCAATCGCGTCAGCTGAAGCCAGCTGAGCGCAACTATCCGGTGCATGACAAGGAACTCCTTGCCATGAAGTATGCACTCGCAAAGTTCCGAGTGTACTTGCTTGGGAGTAGACCATTTGTGGTCTACACCGACCATGCTTCACTGCGCACCGCAGTGAAGTCGCCACACATTTCACAAAGAATGGCGAGATGGCTCTCATTCTTTGCGGAGTATAACTTCCGGGTCGAATACAAACCCGGAAGATTGAACGTGGTGGCCGACGCGTTATCACGTCGGCCGGACTATGCAGAAGCTGTTGACGTCAATGCCATTGACGCCATGCGATCGAGCAAACCCACATCATCTCTGTTGGATGATGTGAAGGCCGCGTACGCGCACGACGCGGACGCGAAGCTCTTGCTGGCCTATGGCACAGCGCCTTCTGACAAGTCCCGTCAGAAGCTGCCCAAGCACCTTCGAGCGCGTGCACACCGCTTTCGTGTGCACGACGGACTACTGCTTTACAATGCAGTCGACGACAACGCGGATCGCGTTGTCGTGCCAAATGACCATGACCTGCGACTCAGGATCATGTACGAGTATCATGATGCCCCGACTGCGGGACATCTCGGACGTGAGAAGACTTACGTCCTTCTCACGCGCGACTTCTACTGGCACCACCAGTATAAGTGGGTGCGCAAGTACATCCGTGCTTGCGAGGTATGCCAACGCGTAAAGCCTGCGCCATTCGCGCAGGCTCCACTGCAATCACTACCGACTCCGTCGGAGTGTTGGAAGTCCATGTCTTTGGACTTCATCTTTGGTCTTCCCCCGGACAGCGGAGGGAATACCGGTGTTGTGGTCTTCGTCGACCGCTTCAGCAAGATGGTACATCTTGCTGCGGTGCCGGCAGAAGTGACCGCGAAGCAGACGGCCCGTCTGTTCGTCGACATGGTGTTCAAACACCATGGCATGCCGACCGACATCGTGTCGGACAGAGACCCGCGCTTCACAGCGCACCTGTGGCAAGAAGTGTTTACACTTCTTGGGAGCCAGCTTTCCATGTCGACTGCGGATCATCCGCAGACGGACGGTCAAACCGAGCGCGTGAATCGCGTGCTCGTCGATATGTTGAAGAGCTACGCTCACTCGTTCCAATACTGGAGCGAGTGCTTATCGATGGCAGAGTTTGCCATCAATAACTCAGTGCATGCCTCGACCGGGCATACACCGTTCTACGTGAATGCCATGCGGCATCCACGTCTACCGAGTTTACTCGGAGTGATGGCTCCCACTTTAAGTGGGGGAGGATCTACGACTGCAATACAGCAGCCGCAGAAAACCGCTGACACTTGCACAGTGTCAGCTGCAACAATGGACAAACCACATGAGTCTGCGCAGGGCGCAGACTCCCCCAACAACAAGGCCAACGACCACGGGTCTGCGCAGGGCGCAGACACCGCAAAGAACCACGCAGAGGCCGGGCCTCTAGCGGAGAGCGAGCTGAATGACTTCAGCTCGGATGCAATCAGTTTCATCACCAAAAGACAAGCCGTGATTCGGTTTGTCCAAGACACAATAGCAGCTTCTGTTGATCAACAGAAGCTGAACGCAGACAATGCGGGCAGAGGCAACACAAATGAATTTAAAGTTGGTTCATTAGTTTTGTTAGCTACACAAAACCTGCCTAGACATGCAGTTTCGGATTTCGGAGCAAGCAAGCTTGCTCCGCGCTTCATCGGGCCGTTCACTGTGTTGGCACGGCACGGCAACGCATACACGCTAGACATACCGTCTAGCATGCGCCTCCATCCGACCTTTTACGTCGGACGGCTGAAGCCATACCTGCAGCACGAGCCATCTAGCTCGGCTGACCCGAAGCCTCGGCAGGAGCCGAGGCAGAAGCGGAGGACTTGGCCTCGGCGACGAGCAACCTCTCCTCCAGCGCGCGGACGCGCTGGAGCAACCCCTTCATCTGGGTCCCCAGCTCGACCTGGATATTCGAGGCGGTCTGCGAGACCGCCGCGACTTGGGCCTTCTGGTTCGCCAGCTCCTGTTTCAGGGCGGCGAACTCAGCGCCCTGCAGACGCTCCACGGCGGTCACCCGGTCGTGGAGAGGCGCATACTGATCAGCCCGGGGCTGATCATACCCGGGGCGTGTTCCCACCCCCGCCACCGCCGATCCGTGACGCCCGCGGCTCAACCCGCTGGATTGTTGAGCGGATTGTTGACCATAGTATCCCGAAAACGAACCCTCAAGGGGCTCGTTTTCGTATTCGTTGGAGAGGATTTCCTCCCCATCGAGATACATGGGAGCCGCGGAACGTCTTGCTGGAGGACGTTCCGGAAATGGTGAGGGCGTACGAGGAGCAGTACGCGCTGGCGCAGCGGAAGTAACACGAGCGCTGCGATCATCGCTAGCGCCCGAACCCTCACGTGCTAAGAACTTAGCACGGAGCTCTTTGAGACTCTCGGGCACACGGAACGACGTGTACCCGTTCAGGTCGCGGTCGCTCAAGCGGACCGCGCCTGGGAAGCACTTCGTGCACTGAAAGCCCTCGGGCACAGCGCACGGCACATTTGCCTCCTCAGCAGCAACATGAAGTTGCTCCAGCTTTCCACGCTTCGAGTACGTCTCGAAGCGATCACGCGCTTGCTTAATCCGATCACGGTAAGCACTCGGCCTCTTGTTGAAGTTCTCAACAAAGGCGTTCCAGCTTTGACAAAGTGCCTGCCATTCGGGCACTTTGCTGCGAGAAGAGGTCTTCTTGCTTTGAAACCATCGGAGCTCATGAAAGAGTCCGATGTAGTAATCGCGCCTTTGATGCGTTTCCGCATCAAAGTGCAGCTCGGCAGCCACAGCGTCATCTTTGATGGCGCTGCATACGTACAGCGGCACCTCATTCGGAGGTACCGAGTTCCCATACCGGTCCGCGATCTCGGACGCGGACGGCATCCATGGATCGCGCGCCGCCGGCGCCGCGCGCGGGGGGCCCTGGGC OLD KEY: TCGGACGCGGACGGCATCCATGGATCGCGCGCCGC NEW KEY: CGCGCCGCCGGCGCCGCGCGCGGGGGGCCCTGGGC ........ _A_ --------------------------------------------------------------------------- __123__ ........ _T_ --------------------------------------------------------------------------- __123__ ........ _G_ --------------------------------------------------------------------------- __123__ ........ _C_ --------------------------------------------------------------------------- __123__ ........ _N_ --------------------------------------------------------------------------- __123__ ........ ALL --------------------------------------------------------------------------- __123__ ******** *** ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^**************************************** __123__ ######## CNS --------------------------------------------------------------------------- __123__ ######## QLT ........................................................................... __123__ OLD KEY: CGCGCCGCCGGCGCCGCGCGCGGGGGGCCCTGGGC NEW KEY: NO_NEW_KEY_FOUND